LOCUS       NM_177585               1579 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus IQ motif containing J (Iqcj), mRNA.
ACCESSION   NM_177585
VERSION     NM_177585.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Martin,P.M., Carnaud,M., Garcia del Cano,G., Irondelle,M.,
            Irinopoulou,T., Girault,J.A., Dargent,B. and Goutebroze,L.
  TITLE     Schwannomin-interacting protein-1 isoform IQCJ-SCHIP-1 is a late
            component of nodes of Ranvier and axon initial segments
  JOURNAL   J Neurosci 28 (24), 6111-6117 (2008)
   PUBMED   18550753
REFERENCE   3  (bases 1 to 1579)
  AUTHORS   Kwasnicka-Crawford,D.A., Carson,A.R. and Scherer,S.W.
  TITLE     IQCJ-SCHIP1, a novel fusion transcript encoding a
            calmodulin-binding IQ motif protein
  JOURNAL   Biochem Biophys Res Commun 350 (4), 890-899 (2006)
   PUBMED   17045569
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK052136.1.
            
            On Apr 5, 2007 this sequence version replaced NM_177585.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK052136.1, BB658546.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1579              AK052136.1         2-1580
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 31.31 cM"
     gene            1..1579
                     /gene="Iqcj"
                     /gene_synonym="D230050A05; EG208426"
                     /note="IQ motif containing J"
                     /db_xref="GeneID:208426"
                     /db_xref="MGI:MGI:3644166"
     exon            1..102
                     /gene="Iqcj"
                     /gene_synonym="D230050A05; EG208426"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..426
                     /gene="Iqcj"
                     /gene_synonym="D230050A05; EG208426"
                     /codon_start=1
                     /product="IQ domain-containing protein J"
                     /protein_id="NP_808253.1"
                     /db_xref="CCDS:CCDS57217.1"
                     /db_xref="GeneID:208426"
                     /db_xref="MGI:MGI:3644166"
                     /translation="MRLEELKRLQNPLEQVDDGKYLLENHQLAMDVENNIENYPLSLQ
                     PLESKVKIIQRAWREYLQRQDPLEKRSPSPPSVSSDKLSSSVSMNTFSDSSTPVSVSR
                     PLAWTVLH"
     exon            103..167
                     /gene="Iqcj"
                     /gene_synonym="D230050A05; EG208426"
                     /inference="alignment:Splign:2.1.0"
     exon            168..248
                     /gene="Iqcj"
                     /gene_synonym="D230050A05; EG208426"
                     /inference="alignment:Splign:2.1.0"
     exon            249..1579
                     /gene="Iqcj"
                     /gene_synonym="D230050A05; EG208426"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagtgacac cgggctctgt gcttccgagg aacaccgtgc gccagcctct gattcagtct
       61 cctctcacct gcaggtgctc tagaaacttc aaaatgcgac tggaagaact aaagagacta
      121 cagaatcctt tagaacaagt tgacgatgga aaatatttgc ttgagaatca ccagctggcc
      181 atggatgtgg agaataacat tgagaactat cccctcagcc tacagccctt ggaatcaaag
      241 gtgaaaatca tccagcgagc atggcgagag tacttgcaga ggcaggaccc cctggagaag
      301 cggagcccat ccccaccttc tgtctcttca gacaagctga gcagctctgt cagcatgaac
      361 accttctccg acagcagcac acccgtgagt gtctcccggc cgcttgcttg gactgtcttg
      421 cactgagtat tgttagccca ggctctggtt cccagaaaag atcttgagat ggtttgtgat
      481 ggggtgtgtg tgtgtgtgga ggggtgctta tttgctgcat gggagcccac agtgaggctc
      541 ttggcgtggt agaactaaga caagattcat gatacaaaaa tgaactcaat gcgtccacag
      601 agtggggatt ctgtgcgacg ttgcttctct atccctgagg tgggtgcgcc ccacccccca
      661 tttcttctgg tgtgttttct ctggcatgtg cttatgtgat gcttgtctgg ttggaaagtc
      721 atcttcgtta ttaggattag aaagagaact tttggcagga aaaattgaag ttgatcacag
      781 actgaaattg ctgaaatgga ttgagtgtgg ctaaatgggt tgcacagacc cctcctgaaa
      841 ggactcctga tagggcttgg gggaacctgc cgcacctgta caggcaggac agacgctggc
      901 aagtgcagtt ctcctgacgt ccagagtttt aagtgatgac aaccattaag aagttttgaa
      961 agggaaacat atggttttgc atactgaaat tggccacccg tttgagttct ccagaatggg
     1021 gttatggaat taacgcatct gctacaagcc tgtgctttgt gtggtgtggg ggtgggggtg
     1081 ggtgggggcg ctggtggggg aatcatcatt aggctctgtt aaatcagcgc gtttcgccat
     1141 tgcgatcatt tatttgtaaa tagtcataga aatgataaaa agttaggaag aggtaaccat
     1201 gcaaagtata ttattaaaaa atattctttt tataatttgc tgtcatactt tctcaggcat
     1261 atgatgagat atggcaaaag ttactttctt tgaaatgtgt gcagaagtct gcatggcttg
     1321 gcattattgc ctaatatttt aatgtagatg tgagttgatt tgttgttgtt gttattgttg
     1381 ttgttgttgt tagtttagtt agtttttaga agaaagaaaa agctagtttt atagctgtga
     1441 aagtaaaaaa cggcagatct gtttaatcga cccaacattt ggtcatttgg agaaagggat
     1501 ccctgttact ggcctcccgg tcactagagg gcgcttgtga accacattgg aaaatgctgg
     1561 gcggtgcttg gtttataag
//
