LOCUS       XM_006511555            3724 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus IQ motif containing H (Iqch), transcript
            variant X3, mRNA.
ACCESSION   XM_006511555
VERSION     XM_006511555.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006511555.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3724
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..3724
                     /gene="Iqch"
                     /gene_synonym="4921504K03Rik"
                     /note="IQ motif containing H; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 19 ESTs, 5 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:78250"
                     /db_xref="MGI:MGI:1925500"
     CDS             107..3130
                     /gene="Iqch"
                     /gene_synonym="4921504K03Rik"
                     /codon_start=1
                     /product="IQ domain-containing protein H isoform X3"
                     /protein_id="XP_006511618.1"
                     /db_xref="GeneID:78250"
                     /db_xref="MGI:MGI:1925500"
                     /translation="MAQAQEDSDPIGSILIQVHEDLHQLKEKLVKFSAEETRSTLDIQ
                     NLETAIQRTEMGLKIHIDKYLGVVNQEVLMAPVKKSLESPVTSKWSIPTVIDQKSFIF
                     PMDSDFWRPQKHRGSLLHGLRRAKPKIQLTTKVMQDPENKHHRAAVTASYGISLPHIN
                     QRKAQDKVQRLIKGSTISNLTVLPPSHRTDPHFIPIPVLQKDASKGVLSMIERGLIPP
                     TARITFQNPPIKPQALPLHSFDEHRKVPMEASFPLALKPRPVPEEVEEPSHQIEIPKG
                     RAKRSRGPLRRKGMKIRTPSKTRKSPWDYIFSVYNGCVDRTAPDFLAFKSRFKLIWGS
                     IFSFLEQIEKFLKDYAISEAKIKGKSLVSLLPEFELKNKLTRNDVLAVLENPVHIQML
                     LNLPGQRYKGQDGKAEAATKIQATWKSYKARSSFISYRQKKWASGVIALAWLLHCHRT
                     RLKRIVKESRQRHLENFRIRAQHLAANWSRIRTSRRTIIHIPSLGYSQYVRKHIFDLD
                     VEQNMQLGRLCDIIDANVNVIYICSHPMTDELKLYYRKLLSLQAAVKTGYYGDRTDLQ
                     NRFRIITPEAVNVFTKHHMCLATHLMYSPKAIKRIKNLIRGEEAYIVGGILHRDDLAV
                     ADMLNVPILGSEPELVHLYSAKSGSKRIFDNANVPMPPGIYDIYTYQQESALVKISEE
                     LAGILAQHVQLVNEKRFPTWRKFLHMFLTQGGVIEAYPPADSVTNLTVDMLIEPDGEV
                     RVLSMGDQLHADGPFISSGTTMPQTSVDPQVLNSLCLQIGNICKEKDVVGYFSIDLVT
                     FIDPSTLEQQVWTTGLNLSYSDQLAMTQLTLYLTNGHLNCSLSTLEVPRFTEDSERER
                     KRLSIQAELAPETSRYAVMSTQLKHDNLSLIFYYVFLQMCKAHGIGYDLEDRQGTVFI
                     LYESLKRYKLGMLTIGVDLQGVLMTFARNLFIIHQEISAPDMQGETNFKTTIDDIETI
                     LGVTEENKMIFVREKQSKEEEDNLYEPVEIHSEIV"
ORIGIN      
        1 cggtcgcgcg cgccgcgttg ctatggtgac gggtgcccgc accatctagg agcgctccgc
       61 aggaggccat acctccggag cctagtgtct tctgccctcc ttagtcatgg cgcaggccca
      121 ggaggacagc gaccccattg gatccatcct aatccaggtt catgaggacc ttcatcagtt
      181 aaaggaaaaa ttagtaaaat tctcagccga ggagacaagg agcactctag acattcaaaa
      241 tcttgagaca gcaatccaaa ggactgaaat ggggttaaag attcacatcg acaagtatct
      301 aggtgttgta aaccaggagg tgttaatggc tcctgtgaag aaaagcttgg aatcccctgt
      361 cacttccaaa tggtcgattc caactgtaat tgaccagaaa tcctttattt tccccatgga
      421 ttctgatttt tggcgacctc aaaagcatcg cggttcattg ctacacggcc ttagaagagc
      481 aaagccaaag atacagttga ctacgaaggt catgcaggac cctgagaaca agcaccacag
      541 ggctgctgta actgctagct atgggatcag tttgccacat attaaccaga ggaaagccca
      601 ggataaggtt cagcggttaa taaaagggtc cacgatctcc aacctcacag ttctgccacc
      661 ctctcatcgc actgaccccc attttatccc catacctgtc ttgcagaagg atgccagtaa
      721 aggcgtctta agtatgattg agcgagggct gatcccccca acagcgagga ttacctttca
      781 gaacccaccc attaaacccc aagcacttcc tctgcacagt tttgatgagc atcgtaaggt
      841 acccatggaa gcctcctttc ctctcgctct caagccacgc ccagttcctg aagaagtgga
      901 ggagccttct caccagatag aaatacccaa ggggagagcc aaaaggtcaa gaggaccgct
      961 cagaagaaag ggcatgaaga ttaggacacc gtctaagact aggaaatcac catgggatta
     1021 tatattttct gtttacaacg gctgtgtaga caggacagcc ccagacttct tagcattcaa
     1081 atcacgcttc aaattaatct gggggagtat tttttctttc ctggaacaaa ttgagaaatt
     1141 tctcaaggac tatgcaatat ctgaagccaa aataaaaggg aagagtctgg tgtccctgct
     1201 tccagagttt gagctgaaga acaaattaac cagaaatgat gttctggctg tgttagagaa
     1261 cccagttcac attcagatgc tgttaaacct tccgggacag aggtacaagg gccaagatgg
     1321 aaaggcagaa gctgccacca agatccaagc cacgtggaaa agttacaagg caagatcttc
     1381 tttcatttct tatcgccaga agaaatgggc ctcaggtgtg atcgccctgg cgtggctttt
     1441 acattgccac aggacaagac taaagaggat agtgaaggaa tcccgacaga gacacctgga
     1501 gaacttccgc attcgagccc agcatctggc agccaactgg agtcgcatca ggacctccag
     1561 gaggactatt atccatatac catcattagg gtactcccag tatgtgagaa aacacatttt
     1621 tgatttggac gtagaacaga acatgcagtt ggggaggctg tgcgacatca tagatgccaa
     1681 cgtcaatgtc atctacatct gttcccatcc tatgacggat gagttaaagc tgtactacag
     1741 gaaactcctg agtctacaag cagctgtcaa aacggggtac tacggggatc ggactgacct
     1801 gcagaacagg ttcagaatta tcacccctga agctgtaaac gtcttcacta agcatcacat
     1861 gtgcctggcc actcacctga tgtacagtcc caaggcaatc aaaagaataa aaaatctcat
     1921 ccgaggagaa gaggcctaca tcgtgggcgg gatcctccac agagacgact tagctgtggc
     1981 cgatatgctg aatgtcccca tcctgggctc agagcctgag ctggttcacc tgtacagtgc
     2041 caagtctgga agcaagcgga tctttgataa tgctaatgtg ccaatgcctc ctggaatata
     2101 tgacatctat acttaccaac aggagtcagc tctggtgaag atctccgagg agctggcggg
     2161 cattttagca cagcacgtac agctagtcaa tgagaaacgg ttcccgacgt ggaggaaatt
     2221 cctccacatg tttctcactc aaggtggcgt gattgaagca tacccacctg cagacagcgt
     2281 caccaacctc acagtagaca tgctgataga acctgatgga gaagtcaggg tgctgtcaat
     2341 gggagaccag cttcatgctg atggcccctt tatttcttct ggtaccacca tgcctcagac
     2401 ctcagtggat ccccaagttc tcaattcttt gtgcctccaa attggaaata tctgcaaaga
     2461 gaaagatgtg gttggttatt tttctataga tctggtgact ttcattgatc cgagcacctt
     2521 agagcagcag gtatggacaa caggcctcaa cctctcatac agtgaccagc tagccatgac
     2581 gcagctcacc ctctacctga caaatggtca tctgaattgt agtctgagca ccctggaagt
     2641 gccccgtttt actgaagatt cagaaaggga aaggaagcgc cttagcatcc aggcagagct
     2701 ggcaccagaa accagtcgct atgcagtgat gtccacccag ctgaagcatg acaatctctc
     2761 actaatcttc tattacgttt ttctccagat gtgtaaggcc catggcattg gctatgacct
     2821 tgaggacaga caaggaactg tttttatatt atatgaatct ctgaagagat acaagttggg
     2881 catgttaaca atcggtgtgg atctccaggg ggtcctcatg acctttgctc gcaatctctt
     2941 catcatccat caagaaatat cagcacctga tatgcaaggc gagaccaatt ttaagactac
     3001 cattgatgat attgaaacca ttttaggagt aacagaagaa aataaaatga tatttgtaag
     3061 agaaaaacag agcaaagagg aggaagataa cctttatgaa cctgttgaaa tacactcaga
     3121 aatagtctga ctttggatac ctgtctagag caagaaagaa tgtttgcttt gcaattagta
     3181 taaaagtggg gaagttagtt tgctttgttt gccaagagat aaatcagaac aaattgtaat
     3241 gtaatcttta aaatcttgtt tattatgcaa cgttatttta ctcattaaat ttaaacctac
     3301 cggtgttttc ggtgtgaatg ctaagaaccc cttcctcctc ccaaagtaac cacggggggg
     3361 ggggggaagt ccactactgc atccgcttct ctgtaaattt gtaactgtat gagtcactct
     3421 tgctttcttg cgttttacaa gttttctcct gcttccaaaa gccacttagc ttctgcattt
     3481 aaaacaccga ataaaccagg atgaccacta tttgtcaaag cacagtgtcc tcttttccca
     3541 aaataaatga catcagtttt aagtgactat catccattct acagtgtacc cagccctatt
     3601 acttgttctc actgtcacac agtaggaaaa gccaatgtgg agttaactgt ggcatcagag
     3661 tgtgtctagg tggcagtatc tgctctgagt ttaagactat gtaattggag cccttcgctg
     3721 gaat
//
