LOCUS       XM_006511554            3745 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus IQ motif containing H (Iqch), transcript
            variant X2, mRNA.
ACCESSION   XM_006511554
VERSION     XM_006511554.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006511554.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3745
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..3745
                     /gene="Iqch"
                     /gene_synonym="4921504K03Rik"
                     /note="IQ motif containing H; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 19 ESTs, 5 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:78250"
                     /db_xref="MGI:MGI:1925500"
     CDS             107..3151
                     /gene="Iqch"
                     /gene_synonym="4921504K03Rik"
                     /codon_start=1
                     /product="IQ domain-containing protein H isoform X2"
                     /protein_id="XP_006511617.1"
                     /db_xref="GeneID:78250"
                     /db_xref="MGI:MGI:1925500"
                     /translation="MAQAQEDSDPIGSILIQVHEDLHQLKEKLVKFSAEETRSTLDIQ
                     NLETAIQRTEMGLKIHIDKYLGVVNQEVLMAPVKKSLESPVTSKWSIPTVIDQKSFIF
                     PMDSDFWRPQKHRGSLLHGLRRAKPKIQLTTKVMQDPENKHHRAAVTASYGISLPHIN
                     QRKAQDKVQRLIKGSTISNLTVLPPSHRTDPHFIPIPVLQKDASKGVLSMIERGLIPP
                     TARITFQNPPIKPQALPLHSFDEHRKVPMEASFPLALKPRPVPEEVEEPSHQIEIPKG
                     RAKRSRGPLRRKGMKIRTPSKTRKSPWDYIFSVYNGCVDRTAPDFLAFKSRFKLIWGS
                     IFSFLEQIEKFLKDYAISEAKIKGKSLVSLLPEFELKNKLTRNDVLAVLENPVHIQML
                     LNLPGQRYKGQDGKAEAATKIQATWKSYKARSSFISYRQKKWASGVIALAWLLHCHRT
                     RLKRIVKESRQRHLENFRIRAQHLAANWSRIRTSRRTIIHIPSLGYSQYVRKHIFDLD
                     VEQNMQLGRLCDIIDANVNVIYICSHPMTDELKLYYRKLLSLQAAVKTGYYGDRTDLQ
                     NRFRIITPEAVNVFTKHHMCLATHLMYSPKAIKRIKNLIRGEEAYIVGGILHRDDLAV
                     ADMLNVPILGSEPELVHLYSAKSGSKRIFDNANVPMPPGIYDIYTYQQMIEQLSQLVT
                     DNLGIRRWVFKMNTEFGGNGTAFCDIPSHLQCYNWVLKERNRFGHEDWKKKWAQESAL
                     VKISEELAGILAQHVQLVNEKRFPTWRKFLHMFLTQGGVIEAYPPADSVTNLTVDMLI
                     EPDGEVRVLSMGDQLHADGPFISSGTTMPQTSVDPQVLNSLCLQIGNICKEKDVVGYF
                     SIDLVTFIDPSTLEQQAPETSRYAVMSTQLKHDNLSLIFYYVFLQMCKAHGIGYDLED
                     RQGTVFILYESLKRYKLGMLTIGVDLQGVLMTFARNLFIIHQEISAPDMQGETNFKTT
                     IDDIETILGVTEENKMIFVREKQSKEEEDNLYEPVEIHSEIV"
ORIGIN      
        1 cggtcgcgcg cgccgcgttg ctatggtgac gggtgcccgc accatctagg agcgctccgc
       61 aggaggccat acctccggag cctagtgtct tctgccctcc ttagtcatgg cgcaggccca
      121 ggaggacagc gaccccattg gatccatcct aatccaggtt catgaggacc ttcatcagtt
      181 aaaggaaaaa ttagtaaaat tctcagccga ggagacaagg agcactctag acattcaaaa
      241 tcttgagaca gcaatccaaa ggactgaaat ggggttaaag attcacatcg acaagtatct
      301 aggtgttgta aaccaggagg tgttaatggc tcctgtgaag aaaagcttgg aatcccctgt
      361 cacttccaaa tggtcgattc caactgtaat tgaccagaaa tcctttattt tccccatgga
      421 ttctgatttt tggcgacctc aaaagcatcg cggttcattg ctacacggcc ttagaagagc
      481 aaagccaaag atacagttga ctacgaaggt catgcaggac cctgagaaca agcaccacag
      541 ggctgctgta actgctagct atgggatcag tttgccacat attaaccaga ggaaagccca
      601 ggataaggtt cagcggttaa taaaagggtc cacgatctcc aacctcacag ttctgccacc
      661 ctctcatcgc actgaccccc attttatccc catacctgtc ttgcagaagg atgccagtaa
      721 aggcgtctta agtatgattg agcgagggct gatcccccca acagcgagga ttacctttca
      781 gaacccaccc attaaacccc aagcacttcc tctgcacagt tttgatgagc atcgtaaggt
      841 acccatggaa gcctcctttc ctctcgctct caagccacgc ccagttcctg aagaagtgga
      901 ggagccttct caccagatag aaatacccaa ggggagagcc aaaaggtcaa gaggaccgct
      961 cagaagaaag ggcatgaaga ttaggacacc gtctaagact aggaaatcac catgggatta
     1021 tatattttct gtttacaacg gctgtgtaga caggacagcc ccagacttct tagcattcaa
     1081 atcacgcttc aaattaatct gggggagtat tttttctttc ctggaacaaa ttgagaaatt
     1141 tctcaaggac tatgcaatat ctgaagccaa aataaaaggg aagagtctgg tgtccctgct
     1201 tccagagttt gagctgaaga acaaattaac cagaaatgat gttctggctg tgttagagaa
     1261 cccagttcac attcagatgc tgttaaacct tccgggacag aggtacaagg gccaagatgg
     1321 aaaggcagaa gctgccacca agatccaagc cacgtggaaa agttacaagg caagatcttc
     1381 tttcatttct tatcgccaga agaaatgggc ctcaggtgtg atcgccctgg cgtggctttt
     1441 acattgccac aggacaagac taaagaggat agtgaaggaa tcccgacaga gacacctgga
     1501 gaacttccgc attcgagccc agcatctggc agccaactgg agtcgcatca ggacctccag
     1561 gaggactatt atccatatac catcattagg gtactcccag tatgtgagaa aacacatttt
     1621 tgatttggac gtagaacaga acatgcagtt ggggaggctg tgcgacatca tagatgccaa
     1681 cgtcaatgtc atctacatct gttcccatcc tatgacggat gagttaaagc tgtactacag
     1741 gaaactcctg agtctacaag cagctgtcaa aacggggtac tacggggatc ggactgacct
     1801 gcagaacagg ttcagaatta tcacccctga agctgtaaac gtcttcacta agcatcacat
     1861 gtgcctggcc actcacctga tgtacagtcc caaggcaatc aaaagaataa aaaatctcat
     1921 ccgaggagaa gaggcctaca tcgtgggcgg gatcctccac agagacgact tagctgtggc
     1981 cgatatgctg aatgtcccca tcctgggctc agagcctgag ctggttcacc tgtacagtgc
     2041 caagtctgga agcaagcgga tctttgataa tgctaatgtg ccaatgcctc ctggaatata
     2101 tgacatctat acttaccaac agatgataga acagttgagc cagttggtga ctgataacct
     2161 gggaatccga cgctgggtct ttaaaatgaa cacggaattt ggaggaaatg ggacagcatt
     2221 ttgtgacatt ccttcccatc tacagtgcta caactgggtg ctgaaggaaa gaaacagatt
     2281 tggccatgag gactggaaga agaagtgggc acaagagtca gctctggtga agatctccga
     2341 ggagctggcg ggcattttag cacagcacgt acagctagtc aatgagaaac ggttcccgac
     2401 gtggaggaaa ttcctccaca tgtttctcac tcaaggtggc gtgattgaag catacccacc
     2461 tgcagacagc gtcaccaacc tcacagtaga catgctgata gaacctgatg gagaagtcag
     2521 ggtgctgtca atgggagacc agcttcatgc tgatggcccc tttatttctt ctggtaccac
     2581 catgcctcag acctcagtgg atccccaagt tctcaattct ttgtgcctcc aaattggaaa
     2641 tatctgcaaa gagaaagatg tggttggtta tttttctata gatctggtga ctttcattga
     2701 tccgagcacc ttagagcagc aggcaccaga aaccagtcgc tatgcagtga tgtccaccca
     2761 gctgaagcat gacaatctct cactaatctt ctattacgtt tttctccaga tgtgtaaggc
     2821 ccatggcatt ggctatgacc ttgaggacag acaaggaact gtttttatat tatatgaatc
     2881 tctgaagaga tacaagttgg gcatgttaac aatcggtgtg gatctccagg gggtcctcat
     2941 gacctttgct cgcaatctct tcatcatcca tcaagaaata tcagcacctg atatgcaagg
     3001 cgagaccaat tttaagacta ccattgatga tattgaaacc attttaggag taacagaaga
     3061 aaataaaatg atatttgtaa gagaaaaaca gagcaaagag gaggaagata acctttatga
     3121 acctgttgaa atacactcag aaatagtctg actttggata cctgtctaga gcaagaaaga
     3181 atgtttgctt tgcaattagt ataaaagtgg ggaagttagt ttgctttgtt tgccaagaga
     3241 taaatcagaa caaattgtaa tgtaatcttt aaaatcttgt ttattatgca acgttatttt
     3301 actcattaaa tttaaaccta ccggtgtttt cggtgtgaat gctaagaacc ccttcctcct
     3361 cccaaagtaa ccacgggggg gggggggaag tccactactg catccgcttc tctgtaaatt
     3421 tgtaactgta tgagtcactc ttgctttctt gcgttttaca agttttctcc tgcttccaaa
     3481 agccacttag cttctgcatt taaaacaccg aataaaccag gatgaccact atttgtcaaa
     3541 gcacagtgtc ctcttttccc aaaataaatg acatcagttt taagtgacta tcatccattc
     3601 tacagtgtac ccagccctat tacttgttct cactgtcaca cagtaggaaa agccaatgtg
     3661 gagttaactg tggcatcaga gtgtgtctag gtggcagtat ctgctctgag tttaagacta
     3721 tgtaattgga gcccttcgct ggaat
//
