LOCUS       NM_178632               5370 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus integrator complex subunit 7 (Ints7), transcript
            variant 1, mRNA.
ACCESSION   NM_178632
VERSION     NM_178632.6
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5370)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5370)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 5370)
  AUTHORS   Nakagawa,H., Tategu,M., Yamauchi,R., Sasaki,K., Sekimachi,S. and
            Yoshida,K.
  TITLE     Transcriptional regulation of an evolutionary conserved intergenic
            region of CDT2-INTS7
  JOURNAL   PLoS One 3 (1), e1484 (2008)
   PUBMED   18213392
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 5370)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CD348032.1, AK086462.1, CK635124.1, AK052103.1, AK020029.1,
            AC132830.12 and BP758668.1.
            
            On Apr 16, 2015 this sequence version replaced NM_178632.5.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC054120.1, AK034856.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                CD348032.1         1-98
            99-3350             AK086462.1         2-3253
            3351-3849           CK635124.1         194-692
            3850-4405           AK052103.1         3445-4000
            4406-4615           AK020029.1         411-620
            4616-4792           AC132830.12        193489-193665
            4793-5370           BP758668.1         29-606              c
FEATURES             Location/Qualifiers
     source          1..5370
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 96.51 cM"
     gene            1..5370
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /note="integrator complex subunit 7"
                     /db_xref="GeneID:77065"
                     /db_xref="MGI:MGI:1924315"
     exon            1..316
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            317..446
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            447..593
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            594..731
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            732..778
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            779..978
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1101
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1219
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            1220..1354
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1452
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            1453..1692
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            1693..1830
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            1831..2037
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2038..2232
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2233..2336
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2337..2405
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2406..2538
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2539..2637
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2638..2823
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     exon            2824..5349
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4314..4319
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /note="hexamer: AATAAA"
     polyA_site      4335
                     /gene="Ints7"
                     /gene_synonym="5930412E23Rik; int7"
                     /note="major polyA site"
ORIGIN      
        1 ctcgctcagc cgcgggaacc caaggttcac aggctccctg agcgcctgcg cgggggggcc
       61 cagagaggaa ctggcgaacc gcggggcgac cgaggcgcat gcgtacactg cctgacagcg
      121 cgcggaggga aaaatccgcg agaccgcggc gggagaagat ggcggtgctg gggtagagtt
      181 tgcaatcttt gtgactgggc gagtcgggta actgtccggg tcatggcgtc aaactcaacc
      241 aagtcgttcc tggccgatgc cggctatggc gaacaggagc tggacgctaa ttccgctctt
      301 atggaactgg acaaaggact gaggtctggc aaactcgggg agcagtgtga ggcagtcgtg
      361 cgctttccca ggcttttcca gaagtacccg ttccctatcc tcatcaactc agcattccta
      421 aagttagctg atgttttcag agttggaaac aacttcctgc ggctgtgtgt tctcaaagtg
      481 acgcagcaaa gtgagaagca cctggagaag attctaaatg tggatgagtt tgtgaagagg
      541 gtgttctcag tgatccacag taacgacccc gtggccagag ccatcactct ccggatgttg
      601 ggaagtctgg cgtccatcat ccctgagagg aagaatgccc atcacagtat ccgccagagt
      661 ctggattccc atgataatgt agaagtcgaa gctgctgttt ttgcagccgc aaacttctct
      721 gcacagtcga aggattttgc tgtggggatc tgtaacaaaa tcagtgaaat gattcaaggc
      781 ttagctacac cggtggacct gaagctgaag ctgatcccga tcctgcagca catgcaccac
      841 gatgccctcc tggcctccag cgcccgccag ctcctgcagc agctggtcac gtcctacccc
      901 tccaccaaga tggtcatcgt gtctctgcac actttcactc tgctggcagc ctcctctttg
      961 gttgacacac ccaagcagat tcagcttctg ctgcagtatt tgaagaatga ccccaggaaa
     1021 gccgtgaaga gacttgctgt tcaggatctg aagctgcttg ctagtaagac accacacacg
     1081 tggagtaagg agaatattca ggcactctgt gagtgtgcac tgcacactcc ttatgacagc
     1141 ttgaaactcg ggatgttgtc tgtcctctct acgctgtcag gaaccattgc cattaaacat
     1201 tacttcagtg tagttcccgg aaatgtaggc tcttccccca gatcttctga tttagtcaaa
     1261 ttagctcaag aatgctgtta ccatagcaac aggggcatcg cagctcatgg agtgagagtg
     1321 ctaactaata taacagtgtc ttgtcaagaa aaagatctct tgtcactgga gcaagatgct
     1381 gtcttcggcc tggaatccct tctggtgctt tgtagtcaag atgacagtcc aggtgctcaa
     1441 tccactgtga agagtgctct cagctgtatg gtgaagctgg ccaagggccg gccccatctg
     1501 agcaggtcag tggttgacac tctgctaact cagctgcaca gctctcagga tgctgcccgg
     1561 atcctcatgt gccactgcct ggcagccatt gccatgcagc tcccggtact gggcgatgga
     1621 atgcttgggg acctcgtgga gctctacaag gtgattggac gatcagccac agacaagcaa
     1681 caggaacttc tggtaagttt ggctactgtg attttcgtag ccagccagaa agcattgtct
     1741 gcagaagtga aggcggtaat caagcagcag cttgaaagcg tctccagtgg gtggaccgtg
     1801 taccggattg ccaggcaggc ttccagaatg ggcaaccacg acatggctcg agagctttac
     1861 cagagtttgc tgacgcaggt tgcatcagaa cacttctact tctggctgaa cagtctgaag
     1921 gagttctccc atgcggagca gtgtctgact gggctgcagg aggatagctt cagctcagca
     1981 ctttcctgca ttgctgagtc tttgaagttc taccacaaag ggatcgcctc cctaacggcc
     2041 gccagcacac cgctgaatcc tttgagcttt cagtgtgagt ttgtaaagct ccggatcgat
     2101 ctcctccaag ccttctcgca gctcatttgc acgtgtaaca gcctgaagac aagccctccc
     2161 cctgccatcg ccaccaccat cgccatgacc ttaggaaacg atcttcagag gtgcggccgg
     2221 atctccaatc agatgaagca gtccatggaa gaattccgaa gccttgcttc ccggtacaga
     2281 gatctctatc aggcatcctt tgatgcagat tcggccactc tgaggaatgt agaactccag
     2341 cagcagagct gcttactgat agctcatgcc atagaagccc tggttttgga tcctgaatca
     2401 gcaagcttcc aggagtatgg gtccacgggc gctgcccacg ccgacagtga gtatgagaga
     2461 agaatgatgt ccgtgtacag tcgcgtccta gaggaggtgg agtcgcttaa ccggaagtat
     2521 gccccagttt cctacatgca cacagcatgc ctctgcaatg ccatcatcgc tctgctgaaa
     2581 gttcctcttt catttcagag atactttttc cagaaactac agtctaccag catcaagctt
     2641 gctctgtcac cttctccccg gagccctgca gagcccattg ctgtgcagaa taaccagcag
     2701 ctggcactaa aggtagaagg cgttgttcag cacggatcta aaccaggcct cttccgcaga
     2761 gttcagtctg tgtgtctgaa tgtttcctcc acactgcaga gtaaatctgg ccaagactac
     2821 aagattccca ttgatagcat gaccaatgag atggagcaga gggttgagcc acataatgat
     2881 tacttcagca cccagttcct gttgaacttt gctgtccttg gaacgcacag catcacagtg
     2941 gagtcatcgg tgagagatgc caatggcatc gtctggaaga ctggccccag aactactatg
     3001 tttgtcaaat ccctggaaga cccctactcc cagcagattc gcctacagca gcaggcccag
     3061 cagcctttgc agccacagcc acagccgcag ccgcagcctc gcagtgccta cacccggttt
     3121 tagctgtgct acaagcatac tactgccaca ctgcacagcc atcagactac aagaagagtc
     3181 ttccgcatgt gcattaagtg tcaatgttac agtgtgaaat ccagtattca ctgatagctg
     3241 taatgtaaca ttctggtgaa gttgtttttg ttgttgttgt tgttgttttc ttaaaaattt
     3301 agtgtaagaa ataacctggc tctcagccaa aataaaagtg cttttttttt tttttttttt
     3361 tcgagacagg gtttctctgg gtagccctgg ctgtcctgga actcactctg tagaccaggc
     3421 tagcctcaaa ctcagaaatt cacctgcctc tgcctcccaa gtgctgggat taaaggcgtg
     3481 cgcccaaatt tcttaaaccc agtcttctgt ctcacactta gcatttttgt tgtattattc
     3541 tttgtggttg gtgagctttt cttcttccaa gaatagtcac agatcattgg taaatttgac
     3601 tgtgtctctg tctaccagaa ttattgtgct gactggcccg acctggggtt ttgaggcagg
     3661 cagggagtac tgttgagtcg tgcagtgctt gtcctgggct ggagaatgag gccttcacag
     3721 aggccgcacc tgccttctgg tctgtgggag cctgtgggcc acaggctcag cggcctgctg
     3781 cattggcacc tcttacccac cttctgtcct gaagcaatgt tagtttattg ttttggtctt
     3841 tgattgaccc aaaaaacagc tccagctaga aaggttggaa atgaatgtgt tgttttttct
     3901 ggtatgtgac tagtgtggac ttctgatatt ttttttctac aaatggaatg tggttcacat
     3961 atgtcttcct gtttgatgta aagggaacag atccttcccc gctctggttt ctactagatg
     4021 acgtattact ctacacctga tgtctagaca gctatctccg agacgtaacc tcagctggga
     4081 tgctcaggga acagactctg gctagccaga aaagcccttt ttctacttga gtcatggtca
     4141 gaaactacat gacaacacac tgattctagg tttgatttaa cagttgacta tggctgctca
     4201 gtgcttttgg accacggtta atatgatgag ctgagcctgc cgataccccc tgtggtcatt
     4261 ggtgttgggt gcagtgggct gctaagggca tgagccctgg atttccctgt gtaaataaat
     4321 ctcctaattt ctttgcttgt gttttacctt ttttttctct tcaaagtcat actgattcat
     4381 aagaggactt gacttttttt aaatggagtt tggtttttgt tttttcctgt cgcatcaccc
     4441 cagggactga gaagtgatcg acaacttggg ttcccctgag gtcactttgc tttgtgagat
     4501 gttacctctg catagcccat tctgcttgtc atagtctgtg caagtctact gtatccactg
     4561 taagtgacct ccccccccag ccacctcagt gcacatggtg cacagtcggc acttggtcag
     4621 cgtctgggga ctgatgccag agtgcgaggg aagacccgtg cggagcccgt gtcctttgct
     4681 ggatatggaa agagctgagt caatgttcca ctttgggctc agcagtgagt cgcgtgtctc
     4741 tgtagagtca gcctcttagc aaatgactga attaggctag gtctctccac tctaactcag
     4801 ctttatcagg caactggatt aaaaaaaaaa aagatagtgg tgaagaaaat tggggaaaat
     4861 gccagagatt gaacttggtt gaggacccaa gtcccactta ctctgtcacc ggcctgactt
     4921 agcacccaga ggaagaccct ttttttcttt ctttctttct tttttttttt tttggaagac
     4981 gggatccagg atctctctgt gtagccctgg ctgtccaacc acttgcttat agaccagact
     5041 aacctctaac tcagactgcc tctgcctcct gagtgctggg attaaaggcg tgtgccacca
     5101 cgcccagcct gtcctttttc actcttaagt agctgatatt gtagagtgag ttgcaggtct
     5161 ctggcactgt tacacagtag attccagaaa gaatgtaaat ctagtaagac actcatttct
     5221 tttgtggccc tcacatttta tgttattaag atgttttgat acttgtggtt ataaactctt
     5281 ggattccatg tactgtggtg acccccagac cccaacagac ttagaaaaca aataaaagca
     5341 ggtcctgata aaaaaaaaaa aaaaaaaaaa
//
