LOCUS       XM_036161918            3589 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus integrator complex subunit 6 like (Ints6l),
            transcript variant X3, mRNA.
ACCESSION   XM_036161918
VERSION     XM_036161918.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..3589
                     /gene="Ints6l"
                     /gene_synonym="4930535D10Rik; 6330505F04Rik; D130066O12;
                     Ddx26b"
                     /note="integrator complex subunit 6 like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 150 ESTs, 74 long SRA reads, 11 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 40 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:236790"
                     /db_xref="MGI:MGI:2442593"
     CDS             379..2964
                     /gene="Ints6l"
                     /gene_synonym="4930535D10Rik; 6330505F04Rik; D130066O12;
                     Ddx26b"
                     /codon_start=1
                     /product="integrator complex subunit 6-like isoform X2"
                     /protein_id="XP_036017811.1"
                     /db_xref="GeneID:236790"
                     /db_xref="MGI:MGI:2442593"
                     /translation="MPILLFLIDTSASMNQRTDLGTSYLDIAKGAVELFLKLRARDPA
                     SRGDRYMLVTYDEPPYCIKAGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLN
                     RLISGIDNYGQGRNPFFLEPSILITITDGNKLTSTASVQEELHLPLNSPLPGSELTKE
                     PFRWDQRLFALVLRLPGVASTEPEQLGSVPSDESAITQMCEVTGGRSYCVRTQRMLNQ
                     CLESLVQKVQSGVVINFEKTGPDPLPVGEDTLMELCRPSNLFAAQPWHSCHKLIYVRP
                     NSKTGVPVGHWPIPESFWPEQNLPSLPPRTSHPVVRFSCVDCEPMVIDKLPFDKYELE
                     PSPLTQYILERKSPHTCWQVFVTSSSKYNELGYPFGYLKASTTLTCVNLFVMPYNYPV
                     LLPLLDDLFKVHKLKPNLKWRQAFDSYLKTLPPYYLITKLESDQILASVGKKPPQEIG
                     IKVKNHSACGLPLAHNKSFRKLLKEIIGESAPRLTELNPKEFAGFQVGLLNKDLKPQT
                     YRNAYDIPRRGLLDQLTRMRSNLLQTRKFIVGQDEDSLHSVPVAQMGNYQEYLKMLAS
                     PLRELDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVVGPQNKVKRPGEPNSPMSSKRR
                     RSMSLLLRRAQTAPTVTNHVGGKGPLSASWFPSCPSLVKHTFGHPDTTVIHDTHEEKM
                     ENGQSPPDGFLLKSAPAEFMNVSGESFISSQLDSLSDDFTGLRKDGFIHKPGNNILLG
                     GAKTCSLSVADQKITMASALETVPNSMQITPAMAQGINADIKHQLMKEVRKFGRKYER
                     IFILLEEVQGPLETKKQFVEFTIKEAARFKRRVLIQYLEKVLEKIDSHHLLNNVNHIN
                     SRSSC"
ORIGIN      
        1 ctgatggtag gtgagcagac agaagttgtg tcagtgaaca gagagggctc tcagtctggg
       61 gcgagcgctc tagtgagcgt ggacggatgc ttaggcagta gtcctggcag cggcagcggc
      121 ggcgggcagt agtggtggca gaagagggga agagagacgg cccggagacc gacacactca
      181 cactttcaag ttcccttgga gggagaggag ttggggctgc agaaagaggc caggagcggt
      241 cccatctatc ccatcccgtt tcccactttt cctcttgctc cctggctctg cgagagttca
      301 ggatttgggt agccatacgt ggcattgagg gaaaagggac tgggagagtg gggaccagaa
      361 ccaggggtgt agtggaagat gcccatcctg ctgttcctca tagatacgtc cgcctccatg
      421 aaccagcgca ctgacctggg cacctcctat ttggacattg ctaaaggcgc tgtggagtta
      481 ttcttgaagc tgcgcgcccg ggacccagcc agccgcggag acaggtacat gctggtcacc
      541 tacgatgagc ctccctactg catcaaggct ggttggaagg aaaatcacgc cacattcatg
      601 aatgaactga aaaatctcca ggcttctgga ctgactactc ttggtcaggc tctaagatcc
      661 tcctttgatt tgttaaatct caatagatta atatctggaa tagacaatta tggacagggg
      721 agaaatccat tttttttaga gccgtctatt ttaattacca tcacagatgg aaacaagtta
      781 acaagtactg ctagcgttca agaagagctt catcttcctt tgaattctcc tctgcctgga
      841 agtgaactaa ccaaagaacc ttttcgttgg gatcaaaggt tatttgccct ggtgttgcgt
      901 ttgcctggag tggcttctac tgagccagag cagctaggga gtgtcccaag tgatgaatca
      961 gccatcacac agatgtgcga ggtcacagga ggtcgctcct actgtgtgag aacacaaaga
     1021 atgttaaatc agtgtttaga gtcactagtt caaaaagtac agagtggtgt agttattaat
     1081 tttgagaaaa caggaccgga tccacttcct gttggagaag acacactgat ggagttgtgc
     1141 aggccaagca acctatttgc tgctcaaccg tggcatagtt gtcataaact catctatgtg
     1201 cgacctaatt ctaaaactgg tgttcctgtt ggacactggc caattccaga atcgttttgg
     1261 ccagaacaga atttaccttc actacctcca cgaacatcac atcctgttgt gaggttttcc
     1321 tgtgttgatt gtgaaccaat ggttatagac aaacttccct ttgacaaata tgaacttgaa
     1381 ccgtctccct taactcagta tatcttggaa agaaaatctc ctcatacttg ctggcaggtg
     1441 tttgttacca gcagttcaaa atataatgag cttggatatc catttggtta tttgaaagcg
     1501 agtactactt taacttgtgt aaacctcttt gtgatgcctt acaactaccc agtcttactt
     1561 cctcttttag atgacttgtt taaagtgcac aagcttaagc caaatctgaa gtggcgacag
     1621 gcttttgaca gctacttaaa aactctgcct ccatactact taataaccaa gctagagtca
     1681 gaccaaattc tagcatcagt ggggaagaaa cctccccagg aaattggtat caaagtgaaa
     1741 aaccattctg catgtggcct acccttggct cacaataaaa gttttaggaa actgttaaaa
     1801 gaaatcatag gggaaagtgc accaaggctc acagaactga atcccaaaga gtttgctggc
     1861 ttccaagtgg ggctcttaaa caaggatttg aaacctcaga catataggaa cgcttatgat
     1921 atcccacgta gaggactttt ggaccagttg accagaatga gatccaatct gctgcagact
     1981 cggaagttta ttgttggcca agatgaagat tcacttcata gtgtcccagt tgcacaaatg
     2041 ggtaactatc aggaatatct aaagatgctg gcttctccac tacgagagct cgatccagat
     2101 cagccaaaac gactgcatac ttttggcaat ccatttaagc aagataagaa gggaatgatg
     2161 atcgatgaag cagatgagtt tgtagtaggg ccacaaaaca aagtgaaacg tcctggagaa
     2221 cccaacagtc ctatgtcatc taagcgaagg cggagtatgt ccctgctgtt gaggagagca
     2281 cagacagcac ctactgtaac taaccatgtg ggcgggaagg gaccactctc agcctcgtgg
     2341 ttcccatctt gtccaagcct cgtaaaacac acctttggac atccagacac cactgtcatt
     2401 catgataccc atgaagagaa gatggaaaat gggcaaagcc cacctgatgg cttcttatta
     2461 aaatctgctc cagcagagtt tatgaatgtg tcaggagaaa gctttatatc cagccagttg
     2521 gattctctat ctgacgactt tactggtctc aggaaagatg gattcattca caaacctggt
     2581 aataatatac ttctaggagg agccaaaacc tgcagtcttt ctgtagctga ccaaaaaatc
     2641 acaatggcat ctgctttgga aacggtgcca aattcaatgc aaatcactcc tgcaatggct
     2701 caaggcatca atgctgacat aaagcatcaa ttaatgaagg aagttcgaaa gtttggacga
     2761 aagtatgaaa ggattttcat tttgcttgaa gaagtgcagg gacctctaga gacgaagaaa
     2821 cagtttgttg aatttaccat caaggaagct gcaaggttta aaagaagagt cttaattcag
     2881 taccttgaga aggtactaga aaaaatcgat tcccaccacc ttcttaacaa tgtgaatcac
     2941 atcaacagca gatcatcatg ttaatgccaa gccaagaaaa gagatgctga atcacagagc
     3001 actgctgctc ctactacagc tagtagagtt cactcatttt ggaccttgcc attccaggcg
     3061 gtttcagagt gaatagggac tggccacttc caaggcgagc actacctact gtcctcattg
     3121 tgtgctaaag aacacgaaag cagagagagt ccacgtggtg atcttgtgct caaagaactc
     3181 ttcaaagatt tctagctgtg ccttttaaac catgcaatat tcaggatcgt tggaatcaaa
     3241 gagtaaaaag ctgctatttc ggtaacttaa ttctctctgg gaaagggcag ggggagtcag
     3301 caaacaatct acctcgagtg ctcttccact ttgactagga ccattacaaa gtgtatctga
     3361 ggctgcacta acctctgaca tctgttcttg catgtgacaa cagaaagctt tcaggtggac
     3421 ttgtacattt ttgtgctttg gaagcaccaa aaggaaaaat aatatgtata ttttctttga
     3481 agtttataca gaagtttata tggagcagta ttgttgtttt tatttgtaaa aatgtaagtg
     3541 atcaaagaga ttttcacttt gcatatatga aataaaatca ttttattga
//
