LOCUS       NM_027256               3260 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus integrator complex subunit 4 (Ints4), transcript
            variant 1, mRNA.
ACCESSION   NM_027256
VERSION     NM_027256.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC149605.7, CA450656.1, CX565861.1, CF724981.1, CX218921.1,
            AK011676.1 and AW493223.1.
            
            On Aug 26, 2009 this sequence version replaced NM_027256.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC013710.1, SRR7345562.2145665.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               AC149605.7         66330-66459
            131-884             CA450656.1         1-754
            885-1289            CX565861.1         369-773
            1290-1908           CF724981.1         77-695
            1909-2204           CX218921.1         271-566
            2205-3243           AK011676.1         202-1240
            3244-3260           AW493223.1         1-17                c
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 53.52 cM"
     gene            1..3260
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /note="integrator complex subunit 4"
                     /db_xref="GeneID:101861"
                     /db_xref="MGI:MGI:1917164"
     exon            1..195
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            196..390
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            391..508
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            509..615
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            616..801
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            802..852
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            853..941
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            942..1062
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1063..1134
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1135..1309
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1310..1515
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1516..1658
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1659..1774
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1775..1908
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1909..2066
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2067..2160
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2161..2241
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2242..2372
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2373..2432
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2433..2592
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2593..2736
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2737..2857
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2858..3244
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3223..3228
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3244
                     /gene="Ints4"
                     /gene_synonym="2610034N24Rik"
                     /note="major polyA site"
ORIGIN      
        1 actgggcagt ggagcttcag gaagaggcct ctctatccag caaccccact gctttgtggg
       61 attgcagcga aatcggtgct gtagaaaggt ttctctccac gttctcagca agtacagaag
      121 ccgagaaggt ccggtgcagc catggcggcg cacctgaaaa agcgggtgta tgaggagttc
      181 actaaagtgg ttcagcagca gcaggaggaa attgctacca agaagctccg attaacaaag
      241 ccgagcaaat ctgccgctct ccacatagat ctgtgtaaag ccacctcccc agcagatgct
      301 ttgcagtacc tactccagtt tgccagaaag cctgtagaag cagagagtgt ggagggggta
      361 gtcaggattc tcttggaaca ttattacaag gaaaatgatc catctgtgag actgaaaatt
      421 gcatcactct tgggattatt atcaaagacg gcaggattct ctccagactg cataatggac
      481 gacgccatta acatactaca gaatgaaaag tctcaccaag tgctagctca actactggac
      541 actttgcttg caattggcag taaactacca gaaaatcaag ctacccaagt gcgattagtg
      601 gatgtggcct gcaagcacct gacagatact tcccatggtg taagaaataa gtgcttgcaa
      661 ttacttggca atcttggctc tttggagaaa agtgtcacaa aagatactga aggctcagct
      721 gccagagatg ttcagaaaat tatcggggac cacttcagtg accaagatcc acgggtcaga
      781 acagcagcta taaaagccat gttgcagctc catgaaagag gactgaagtt acaccaaacg
      841 atttataatc aggcctgtaa attgctctct gatgactacg agcaggtgcg cagtgctgca
      901 gtccagctta tctgggttgt cagccagctc tatcctgaga gtatagttcc aataccgtct
      961 tctaatgaag aaatccgtct agttgatgat gcatttggaa aaatttgcca catggtcagt
     1021 gatggctcct gggtggttcg tgttcaagct gcaaagctat tgggctcgat ggagcaagtt
     1081 agctctcatt tcttggagca gactcttgac aagaagctga tgtcagatct gaggaggaaa
     1141 cgcactgcac atgagcgtgc caaggaactt tacagttcgg gggagttttc cagtggcagg
     1201 aaatggggag atgatgctcc caaggaagaa atagacacgg gggccgtgaa cctgatagag
     1261 tcaggagcgt gtggagcctt tgttcatggg ttggaagatg agatgtatga ggttcgcatt
     1321 gctgctgtgg aggctctgtg catgctagcc cagtcttcgc cctcttttgc tgaaaagtgc
     1381 cttgactttc tagttgacat gttcaatgat gaaattgagg aagtgcgtct gcagtccata
     1441 cacaccatga gaaaaatctc taacaatatc accctccgag aagatcagct tgacactgtc
     1501 ctggctgtgt tagaggattc atccagggat attagagagg ctcttcatga actcttatgc
     1561 tgcactaatg tctcaaccaa agaagggatt catcttgcac tggtggagct tctaaaaaac
     1621 ctaaccaagt accctactga cagggactcc atatggaagt gcttgaagtt tctgggcagc
     1681 cggcatccga ccctcgtgct tcctctggtg ccagagctct tgagcacgca cccatttttt
     1741 gatactgctg aaccagacat ggacgatcca gcttacattg cagttttagt tcttatcttc
     1801 aatgctgcta agacctgtcc tacaatgcca gcactcttct cagaccacac cctcaggcac
     1861 tatgcctacc tccgagacag cctttctcat cttgttcctg ccttgaggtt accagggaga
     1921 aaactggtgt cctccactgt cccctctaac atcacccctc atgaagatcc ttcccagcag
     1981 ttcctgcagc agagccttga aagggtgtat agtgttcagc acctagatcc tcagggggcc
     2041 caagagctgc tggaattcac catcagagat ctgcaaagac ttggagagct tcagtctgaa
     2101 ttggcaggag tagctgactt ctctgccacc tatcttcagt gtcaactgct cctcattaag
     2161 gccttgcagg aaaagctgtg gaatgtggct gcccccttgt atctaaagca gagtgatttg
     2221 gcctcagcag cagcaaaaca gatcatggag gaaacctaca aaatggagtt tatgtacagt
     2281 ggtgtggaaa acaagcaggt tgtgatcata cagcacatga ggcttcaggc caaagctctg
     2341 caactcatag taactgcacg aactactcga ggagtagacc ccttatttgg aatgtgtgaa
     2401 aaatttttac aggaagtgga tttttttcag aggtgtttca ttgcggattt gccccacctt
     2461 caagatagct ttgtggacaa actccttgat cttatgcccc gactcatggc atctaaacct
     2521 gttgaagtga tcaaaattct gcagacaatg ctgcggcaga gcaccttctt acatcttccg
     2581 cttccagagc agatacacaa agcctcagcc accattattg agccggcagg agagtcagac
     2641 aatcctttgc ggtttacatc tgggttggtg gtagccttgg atgtggatgc aaccctggaa
     2701 catgtgcaag acccccagaa cactgtcaag gttcaggtct tatatccaga tggccaggct
     2761 cagatgatcc accccaagcc agcagatttc cggaatcctg gcccaggacg gcaccgtctc
     2821 ctcactcagg tgtacctctc ccatactgcc tggacagaac catgccaagt ggaagtgagg
     2881 ctattgctgg cctacaactc cggtgcacga attccaaaat ctccatggct ggagggtagt
     2941 gagatgtcac cacaggtgga aaccagcatc gagggcacca tccccttcag taagcctgtg
     3001 aaagtctaca taatgcccaa gcctgcaaga cgctgaccca caagcagtca tcacagccat
     3061 ggcctagaaa cccttgtcag gcaccagcga gccgaagcct ggatgtgtat gtataggctt
     3121 gaagaacatg taaaccttat aatctcattt cataccacac acaggatcaa tcatttctgc
     3181 attaaaacca gaaatctttt ggtttctttc ctccattccc ataataaagt tgagaaaaca
     3241 cctaaaaaaa aaaaaaaaaa
//
