LOCUS       XM_036158479            1079 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus interleukin 3 receptor, alpha chain
            (Il3ra), transcript variant X21, mRNA.
ACCESSION   XM_036158479
VERSION     XM_036158479.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000080.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="14"
     gene            1..1079
                     /gene="Il3ra"
                     /gene_synonym="CD123; CDw123; SUT-1"
                     /note="interleukin 3 receptor, alpha chain; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 14 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     24 samples with support for all annotated introns"
                     /db_xref="GeneID:16188"
                     /db_xref="MGI:MGI:96553"
     CDS             242..1012
                     /gene="Il3ra"
                     /gene_synonym="CD123; CDw123; SUT-1"
                     /codon_start=1
                     /product="interleukin-3 receptor subunit alpha isoform
                     X20"
                     /protein_id="XP_036014372.1"
                     /db_xref="GeneID:16188"
                     /db_xref="MGI:MGI:96553"
                     /translation="MTSLPVLASSLGLNVTSCHHISVGVASGCDFTSCVTSCARLWAS
                     DFSSRPLSLPPGSVLPTTASVHTTTALMSTPLAPPLMVAMKAAPLTSTLSLAPPPTAL
                     TLSPRSPSPSTAVAALAPCPAWTTLWTCSAQSSRSEPQEYNVSIPHFWVPNAGAISFR
                     VKSRSEVYPRKLSSWSEAWGLVCPPEVMPVKTALVTSVATVLGAGLVAAGLLLWWRKS
                     LLYRLCPPIPRLRLPLAGEMVVWEPALEDCEVTPVTDA"
ORIGIN      
        1 gggtcgcagt cctctgccct gtaagcagtt ccgaccccca gacccccgag gacaggaacg
       61 gacgccgcca gcgccgtggg cgccactcag atggcgacca cgaggccgca gcccaggacc
      121 tgcgctgctg ggtgcatgag gggcagctga gctgccaatg ggagcggggt ccgaaagcaa
      181 cgggtgacgt gcactaccgg atgttctggc gtgatgtgcg gtggagcctc tccaagaact
      241 gatgacatca cttcctgtgc ttgcttcctc tttggggctt aatgtcactt cctgtcatca
      301 tatttcggtg ggcgtggcct ctgggtgtga cttcacttcc tgtgtcactt cctgtgcccg
      361 cctctgggcc tctgacttct cttcccgacc cctgtccctg ccaccaggct cggtcctgcc
      421 cacaaccgcg agtgtccaca ctaccacagc cttgatgtca acaccgctgg ccccgcccct
      481 catggtggcc atgaaggctg cacccttgac ctcgacactg tccttggctc cacccccaac
      541 agccctgacc ttgtccccca ggtcaccatc accgtcaacg gcagtggccg cgctggcccc
      601 gtgccctgca tggacaacac tgtggacctg cagcgcgcag agctcccgct cagagccaca
      661 ggaatacaat gtctccatcc cccacttctg ggtccccaac gctggtgcca tctccttccg
      721 ggtcaagtcg aggtcagagg tttaccctcg gaagctcagc agctggagcg aagcctgggg
      781 cctcgtctgc cccccagagg tgatgcctgt gaagacagcc ttggtgactt cagtggctac
      841 ggtgctgggg gcagggctcg tggcagctgg gctcctgctg tggtggagga agtcgctgct
      901 ctaccgcctg tgcccaccca ttccacgcct gcgcctgccc ttggcagggg agatggtcgt
      961 gtgggaacca gctcttgaag actgcgaggt gacgcctgtg acagacgcct gagaactgtg
     1021 tgggggctgg ggcataggga gcggtgggcg gggtcaataa agtgcgtgga ttcctggga
//
