LOCUS       NM_001378674            1704 bp    mRNA    linear   ROD 26-SEP-2023
DEFINITION  Mus musculus interleukin 11 receptor subunit alpha 3 (Il11ra3),
            transcript variant 2, mRNA.
ACCESSION   NM_001378674 XM_006537513 XM_006542759
VERSION     NM_001378674.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Church DM, Schneider VA, Graves T, Auger K, Cunningham F, Bouk N,
            Chen HC, Agarwala R, McLaren WM, Ritchie GR, Albracht D, Kremitzki
            M, Rock S, Kotkiewicz H, Kremitzki C, Wollam A, Trani L, Fulton L,
            Fulton R, Matthews L, Whitehead S, Chow W, Torrance J, Dunn M,
            Harden G, Threadgold G, Wood J, Collins J, Heath P, Griffiths G,
            Pelan S, Grafham D, Eichler EE, Weinstock G, Mardis ER, Wilson RK,
            Howe K, Flicek P and Hubbard T.
  TITLE     Modernizing reference genome assemblies
  JOURNAL   PLoS Biol 9 (7), e1001091 (2011)
   PUBMED   21750661
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X,
            Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y,
            Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague
            B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R,
            Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K,
            Eichler EE and Ponting CP.
  CONSRTM   Mouse Genome Sequencing Consortium
  TITLE     Lineage-specific biology revealed by a finished genome assembly of
            the mouse
  JOURNAL   PLoS Biol 7 (5), e1000112 (2009)
   PUBMED   19468303
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL824709.35.
            
            On or before Dec 9, 2020 this sequence version replaced
            XM_006537513.3, XM_006542759.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660815.221404.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                AL824709.35        136620-136670       c
            52-151              AL824709.35        136043-136142       c
            152-212             AL824709.35        135839-135899       c
            213-382             AL824709.35        134844-135013       c
            383-497             AL824709.35        134601-134715       c
            498-530             AL824709.35        134415-134447       c
            531-697             AL824709.35        134170-134336       c
            698-861             AL824709.35        133450-133613       c
            862-1003            AL824709.35        132132-132273       c
            1004-1129           AL824709.35        131661-131786       c
            1130-1226           AL824709.35        131467-131563       c
            1227-1309           AL824709.35        131157-131239       c
            1310-1704           AL824709.35        130250-130644       c
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.5 cM"
     gene            1..1704
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /note="interleukin 11 receptor subunit alpha 3"
                     /db_xref="GeneID:100042555"
                     /db_xref="MGI:MGI:3801997"
     exon            1..51
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1350
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="interleukin 11 receptor, alpha chain 2-like
                     isoform 2"
                     /protein_id="NP_001365603.1"
                     /db_xref="GeneID:100042555"
                     /db_xref="MGI:MGI:3801997"
                     /translation="MSAPYLRVMRFAMSSSCSGLTRVLVAVATALVSSSSPCPQAWGP
                     PGVQYGQPGRPVMLCCPGVSAGTPVSWFRDGDSRLLQGPDSGLGHRLVLAQVDSPDEG
                     TYVCQTLDGVSGGMVTLKLGFPPARPEVSCQAVDYENFSCTWSPGQVSGLPTRYLTSY
                     RKKTLPGAESQRESPSTGPWPCPQDPLEASRCVVHGAEFWSEYRINVTEVNPLGASTC
                     LLDVRLQSILRPDPPQGLRVESVPGYPRRLHASWTYPASWRRQPHFLLKFRLQYRPAQ
                     HPAWSTVEPIGLEEVITDTVAGLPHAVRVSARDFLDAGTWSAWSPEAWGTPSTGLLQD
                     EIPDWSQGHGQQLEAVVAQEDSLAPARPSLQPDPRPLDHRDPLEQVAVLASLGIFSCL
                     GLAVGALALGLWLRLRRSGKEGPQKPGLLAPMIPVEKLPGIPNLQRTPENFS"
     exon            52..151
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            152..212
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            213..382
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            383..497
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            498..530
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            531..697
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            698..861
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            862..1003
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1129
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            1130..1226
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            1227..1309
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
     exon            1310..1704
                     /gene="Il11ra3"
                     /gene_synonym="Gm13305; Gm2002"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acatttgggc ccatcatgtc agctccctat ctgcgggtga tgaggtttgc tatgagcagc
       61 agctgctcag ggctgaccag ggtcctggtg gccgtggcta cagccctggt gtcttcctcc
      121 tccccctgcc cccaagcttg gggtcctcca ggggtccagt atggacaacc tggcaggccc
      181 gtgatgctgt gctgccccgg agtgagtgct gggactccag tgtcctggtt tcgggatgga
      241 gattcaaggc tgctccaggg acctgactct gggttaggac acagactggt cttggcccag
      301 gtggacagcc ctgatgaagg cacttatgtc tgccagaccc tggatggtgt atcagggggc
      361 atggtgaccc tgaagctggg ctttccccca gcacgtcctg aagtctcttg ccaagcggta
      421 gactatgaaa acttctcctg tacttggagt ccaggccagg tcagcggttt gcccacccgc
      481 taccttactt cctacaggaa gaagacgctg ccaggagctg agagtcagag ggaaagtcca
      541 tccaccgggc cttggccgtg tccacaggac cctctggagg cctcccgatg tgtggtccat
      601 ggggcagagt tctggagtga gtaccggatc aatgtgaccg aggtgaaccc actgggtgcc
      661 agcacgtgcc tactggatgt gagattacag agcatcttgc gtcccgatcc accccaagga
      721 ctgcgggtgg aatccgtacc tggttaccca agacgcctgc atgccagctg gacataccct
      781 gcctcctggc gtcgccaacc ccactttctg ctcaagttcc ggttgcaata ccgaccagca
      841 cagcatccag cctggtccac ggtggagccc attggcttgg aggaagtgat aacagatact
      901 gtggctgggc tgccccacgc ggtacgagtc agtgccaggg actttctgga tgctggcacc
      961 tggagcgcct ggagcccaga ggcctggggt actcctagca ctggtctcct gcaggatgag
     1021 atacctgatt ggagccaggg acatggacag cagctagagg cagtagtagc tcaggaggac
     1081 agcctggctc ctgcaaggcc ttccttgcag ccagacccaa ggccacttga tcacagggat
     1141 cccttggagc aagtagctgt gttagcatct ctgggaatct tctcttgcct tggcctggct
     1201 gttggagccc tggcactggg gctctggctg aggctgagac ggagtgggaa ggaaggaccg
     1261 caaaaacctg ggctcttggc acccatgatc ccggtggaaa agcttccagg aattccaaac
     1321 ctgcagagga ccccagagaa cttcagctga tttcatctgt aacccggtca gacttgggtg
     1381 gttaaaagga caggcagaaa gaggcggggc agtggatccc tgtggatgga ggtctcagct
     1441 ggaagtctga gctcttttct ttgacaccta tactccaaac ttgctgccgg ctgaaggctg
     1501 tctggacttc tgatgtcctg aggtggaagt ccacctgagg aatgtgtaca gaagtctgtg
     1561 ttcctgtgat cgtgtgtgta tgtgagacag ggagcaaaag ttctctgcat gtgtgtacac
     1621 atgattggag agtgtgtgcg gtcttgggct tggcccttct ggggagtgtg aagagttgaa
     1681 ataaaagaga cggaagtttt tgga
//
