LOCUS       XM_011243713            4749 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus IKAROS family zinc finger 1 (Ikzf1),
            transcript variant X16, mRNA.
ACCESSION   XM_011243713
VERSION     XM_011243713.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011243713.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..4749
                     /gene="Ikzf1"
                     /gene_synonym="5832432G11Rik; hlk-1; Ikaros; LyF-1;
                     mKIAA4227; Zfpn1a1; Znfn1a1"
                     /note="IKAROS family zinc finger 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 7 ESTs, 127 long SRA reads, 13 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:22778"
                     /db_xref="MGI:MGI:1342540"
     CDS             51..1400
                     /gene="Ikzf1"
                     /gene_synonym="5832432G11Rik; hlk-1; Ikaros; LyF-1;
                     mKIAA4227; Zfpn1a1; Znfn1a1"
                     /codon_start=1
                     /product="DNA-binding protein Ikaros isoform X10"
                     /protein_id="XP_011242015.1"
                     /db_xref="GeneID:22778"
                     /db_xref="MGI:MGI:1342540"
                     /translation="MDVDEGQDMSQVSGKESPPVSDTPDEGDEPMPVPEDLSTTSGAQ
                     QNSKSDRGMVAYGADGFRDFHAIIPKSFSPSNVKVETQSDEENGRACEMNGEECAEDL
                     RMLDASGEKMNGSHRDQGSSALSGVGGIRLPNGKLKCDICGIVCIGPNVLMVHKRSHT
                     GERPFQCNQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALTGHLRTHSGD
                     KCLSDMPYDSANYEKEDMMTSHVMDQAINNAINYLGAESLRPLVQTPPGSSEVVPVIS
                     SMYQLHKPPSDGPPRSNHSAQDAVDNLLLLSKAKSVSSEREASPSNSCQDSTDTESNA
                     EEQRSGLIYLTNHINPHARNGLALKEEQRAYEVLRAASENSQDAFRVVSTSGEQLKVY
                     KCEHCRVLFLDHVMYTIHMGCHGFRDPFECNMCGYHSQDRYEFSSHITRGEHRYHLS"
ORIGIN      
        1 gggcgagcgg gctgcagccg ccggcggcgc cagcagataa cctgaagaca atggatgtcg
       61 atgagggtca agacatgtcc caagtttcag gaaaggagag ccccccagtc agtgacactc
      121 cagatgaagg ggatgagccc atgcctgtcc ctgaggacct gtccactacc tctggagcac
      181 agcagaactc caagagtgat cgaggcatgg ttgcatatgg ggctgatggc tttagggatt
      241 ttcatgcaat aattcccaaa tctttctctc ccagtaatgt taaagtagag actcagagtg
      301 atgaagagaa tgggcgtgcc tgtgaaatga atggggaaga atgtgcagag gatttacgaa
      361 tgcttgatgc ctcgggagag aaaatgaatg gctcccacag ggaccaaggc agctcggctt
      421 tgtcaggagt tggaggcatt cgacttccta acggaaaact aaagtgtgat atctgtggga
      481 tcgtttgcat cgggcccaat gtgctcatgg ttcacaaaag aagtcatact ggtgaacggc
      541 ctttccagtg caaccagtgt ggggcctcct ttacccagaa aggcaacctc ctgcggcaca
      601 tcaagctgca ctcgggtgag aagcccttca aatgccatct ttgcaactat gcctgccgcc
      661 ggagggacgc cctcaccggc cacctgagga cgcactccgg agacaagtgc ctgtcagaca
      721 tgccctatga cagtgccaac tatgagaagg aggatatgat gacatcccac gtgatggacc
      781 aggccatcaa caatgccatc aactacctgg gggctgagtc cctgcgccca ttggtgcaga
      841 caccccccgg tagctccgag gtggtgccag tcatcagctc catgtaccag ctgcacaagc
      901 ccccctcaga tggcccccca cggtccaacc attcagcaca ggacgccgtg gataacttgc
      961 tgctgctgtc caaggccaag tctgtgtcat cggagcgaga ggcctccccg agcaacagct
     1021 gccaagactc cacagataca gagagcaacg cggaggaaca gcgcagcggc cttatctacc
     1081 taaccaacca catcaacccg catgcacgca atgggctggc tctcaaggag gagcagcgcg
     1141 cctacgaggt gctgagggcg gcctcagaga actcgcagga tgccttccgt gtggtcagca
     1201 cgagtggcga gcagctgaag gtgtacaagt gcgaacactg ccgcgtgctc ttcctggatc
     1261 acgtcatgta taccattcac atgggctgcc atggctttcg ggatcccttt gagtgtaaca
     1321 tgtgtggtta tcacagccag gacaggtacg agttctcatc ccatatcacg cggggggagc
     1381 atcgttacca cctgagctaa acccagccag gccccactga agcacaaaga tagctggtta
     1441 tgcctccttc ccggcagctg gacccacagc ggacaatgtt gggagtggat ttgcaggcag
     1501 catttgttct tttatgttgg ttgtttggcg tttgatttgc gttggaagat aagtttttaa
     1561 tgttagtgac aggattgcat tgcatcagga acattcacaa catccatcct tctagccagt
     1621 tttgttcact ggtagctgag gtttcccgga tatgtggctt cctaacactc tccccaccca
     1681 ccccaccccc caaaacagag cctgaatctt catgaagtga ataaaacaat tatccaagaa
     1741 ggagtaaggt ggatcttgcc ctaagcagag tttatgccac aaagattctc caaatccccc
     1801 aagacagcac agccactggg gttgagccat ctcagggagc tctgcaggtg agccagagga
     1861 ccagatataa ggcagctggg gaggagcagg gacatcagcc tgtgcagaga ccaaggccaa
     1921 aggttgaact ttgaaagact attaagtcat atattgtatg gcaatatggt gtctggacaa
     1981 gttgtgcaat gtgctgaagg gaagggattg gagagccttg aagactcttc ttcatttgcc
     2041 tgatcaaccc gacctccaga gggtttgttg cccagtaaga cgagctcagt gctcttgtga
     2101 tcatttttct cttatcgttt ccatgccgtt gatggccctg aagctcatca ctgcatttta
     2161 gaacccaatc ctgaaattgg gacctttttt ttaaacttct gatactgtaa aacttcttgg
     2221 aagccaaagc tttcttccaa gccccatcct cagttatcct ggttcctgtt cttccccgag
     2281 ctgatagtac caggacctgt tattccacaa aagcacaggc atccgtcact tcaattcaat
     2341 ccctgttcag attatagata tggactttgc tatcttgata aatgtcttct ctatgttatt
     2401 ttgtctgaaa aacctataaa accattatta agaatgacca tttttagatg gaagaaatga
     2461 gcccagcatc tcagtggcta aaacacaaaa tatccatgct tttaaacaaa attgttaaat
     2521 attccgaagc tctctagtat aaacaccaag tagcatgtgt tttcacataa agaagacagg
     2581 ggccatgcaa cctttatcaa gtggaggtat tagaatgttg taatgtttgg agacacagtg
     2641 tgaccagtac aggttcccag agaggaatgc ccaccatatc acagaaaggt agaggtggga
     2701 tctggtatag ccagaccaag acagggatgt cacgctgaag ccaagtcagt tagctgaaga
     2761 ttctcaacag gaaggcctct cttaagagtc agtaataggg ttgttaccat ccaccacctc
     2821 aacaaaacaa aaagcttata attgtaaatg tttacagcac tgtcttcgca gaaactttct
     2881 gaggtgattc caaagaacta gaggggagat ggtctataac agctcttgaa gtaaacgagg
     2941 ttcttagtct cagctctcct gacatatagg gcttgatcat tactggtagg gattgttctg
     3001 tgaattgctt actactaccc ctggtctctc cccagtagat gccaggaaca ttctagctga
     3061 tacctaactg tcttcccagg tgttcgaggg agcaaaccac tgatctaaac tctaaacgct
     3121 gaagtacgca ggttttctaa aaatgacaag cccttgaaac ctttcccagt aggcagcctc
     3181 gagctggact tgtgtctttg gaatgctgat gaattctata gatcagcatt gcaaatacac
     3241 ttcaaatacg tctgagttca agtgcaggga ctgagttcac caaggtgtga aatgtgctca
     3301 aaaagttcaa aagtgtgtgt ttctttgttt ctaaaacatt gtggcatctt tttcatttgt
     3361 ttctaaaact ttttttttag aaacaaatga agcacttgga aagtgaaagt aaaattacaa
     3421 atataaggat ttacactgaa gagagaaaaa ttttaggaac tatagctgtg aaaagatttt
     3481 gttcaaaagg caggctagcc ttacccaaat tcatatatgg caggtgtcaa cctcccaagc
     3541 ttacagttag caggcagctt ttgctcactc atccttagcc atgagagcca ttaagtgtgg
     3601 tccaagaaag atggctccaa accctacccc cgacccacca gtggtattca gagattaaag
     3661 cagaattgta aatagtggct tcaggagctc ttttttagaa tgctttgccc cttcctctca
     3721 ctgccttttt tagccaatat aaatgtcaat ttgcacacct tttgttgtgg ttttatattg
     3781 taacagcatt tttttgaaac tattgtattt aagataaggt ttcatattat gtccacaagt
     3841 aattaaatta tgtttgaagg tggctatatg ctgtatcaga agttgatgat gtttttcttt
     3901 agctggtaaa ggagggtttt gcatgacctc actgtttgtt ctgtggtttg ttctgttgta
     3961 tgatgtgtgt cttgagtttt gctgtgtgat gaagtgcgct gagattccag tgccctcaag
     4021 ttgtgtttta agtagctatc agaggcaaga gggttcctaa gagcaggttg acctgttggc
     4081 gacagatggc aatcaccatt tctcattcct tcttctccct gttaccccag cttcctgtcc
     4141 caggtccctt ctgtgattct taccttagtg tgcatgtgtg tctgtcctgg tgagagtcag
     4201 gagcatcgat atgttatcat tgcattatca ccaagggcac gcacagccta gcacctgttg
     4261 cttcagatac cgtcacactc tgtttccaat ttagatacaa ccacataata aaatgttaga
     4321 gtcttcaatg ggaagcagag gtgcttgtta taaagatggg ggcttatgct tgtgtcacat
     4381 tttgtgttct tttcttcttt tgtttggttt taacttaatt gtgacccttg taacatcatc
     4441 ttgccaaaaa aaaaaaaaaa gttgaactgg atttatgtag acatgtcaag acgtactatc
     4501 tatttctttg tcagttatag caataagagt ggataaactc taaaatccag atctcccaca
     4561 atgaacatcc gtgttctttc tatgattttt ctttctttat ggtgagccac aattaaactt
     4621 gagatgtaca gccacccaaa cccaggaagc tcatgtgcat ctggtgctat ggcactcact
     4681 gtgaataagt gtgaccagat attaatatgc aatattgttt ccaatccttt ctaatacatt
     4741 ttttcatga
//
