LOCUS       XM_006527852            6903 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus inhibitor of kappaB kinase gamma (Ikbkg),
            transcript variant X6, mRNA.
ACCESSION   XM_006527852
VERSION     XM_006527852.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006527852.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6903
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..6903
                     /gene="Ikbkg"
                     /gene_synonym="1110037D23Rik; IKK[g]; NEMO"
                     /note="inhibitor of kappaB kinase gamma; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 mRNAs, 50 ESTs, 831 long SRA reads, 4 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 25 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16151"
                     /db_xref="MGI:MGI:1338074"
     CDS             249..1487
                     /gene="Ikbkg"
                     /gene_synonym="1110037D23Rik; IKK[g]; NEMO"
                     /codon_start=1
                     /product="NF-kappa-B essential modulator isoform X3"
                     /protein_id="XP_006527915.1"
                     /db_xref="GeneID:16151"
                     /db_xref="MGI:MGI:1338074"
                     /translation="MNKHPWKNQLSEMVQPSGGPAEDQDMLGEESSLGKPAMLHLPSE
                     QGTPETLQRCLEENQELRDAIRQSNQMLRERCEELLHFQVSQREEKEFLMCKFQEARK
                     LVERLSLEKLDLRSQREQALKELEQLKKCQQQMAEDKASVKAQVTSLLGELQESQSRL
                     EAATKDRQALEGRIRAVSEQVRQLESEREVLQQQHSVQVDQLRMQNQSVEAALRMERQ
                     AASEEKRKLAQLQAAYHQLFQDYDSHIKSSKGMQLEDLRQQLQQAEEALVAKQELIDK
                     LKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFN
                     KLKVGCHESARIEDMRKRHVETPQPPLLPAPAHHSFHLALSNQRRSPPEEPPDFCCPK
                     CQYQAPDMDTLQIHVMECIE"
ORIGIN      
        1 ctccagaggc tgggtgggag gtgccgagtg tggctgtgca ctcctcttgt gctaaagctg
       61 agccgcctag cttcctacag tgtcactgct tcaagatgaa atctccttct agactttgag
      121 gaggaagaag tgctactggg tggtgcttta gcacctgtga tggtccaagt ctggtctcca
      181 ctcaatggct cagcacagag ttctgagatg tgacacaagt acatgtatat cagacactgt
      241 cctgttggat gaacaagcac ccctggaaga accagctgag tgagatggtg cagcccagtg
      301 gtggcccagc agaggaccag gacatgctgg gtgaagaatc ttctctgggg aagcctgcaa
      361 tgctacatct gccttcagag cagggtactc ctgagaccct ccagcgctgc ctggaagaga
      421 atcaagagct ccgagacgct atccggcaga gcaatcagat gctgagggaa cgctgtgagg
      481 agctgctgca tttccaggtc agccagcggg aggagaagga gttccttatg tgcaaattcc
      541 aggaagcccg gaagctggtg gagagactga gcttggagaa gcttgatctt cggagtcaga
      601 gggaacaggc cttaaaggag ttggagcaac tgaagaaatg ccaacagcag atggctgagg
      661 acaaggcctc tgtgaaagct caggtgacat cattgctcgg agaactccag gagagccaga
      721 gccgtttgga ggctgccacc aaggatcggc aagctttaga gggaaggatt cgagcagtta
      781 gtgagcaggt cagacagctg gagagtgagc gggaggtgct acagcagcag cacagcgtcc
      841 aggtggacca gctgcgtatg cagaaccaga gcgtggaggc tgccttgcga atggagcggc
      901 aggctgcttc agaggagaag cggaagctgg ctcagttgca ggcagcctat caccagctct
      961 tccaagacta cgacagccac attaagagca gcaagggcat gcagctggaa gatctgaggc
     1021 aacagctcca gcaagctgag gaggccctgg tagccaaaca ggaattgatt gataagctga
     1081 aagaggaggc tgagcagcac aagattgtga tggagactgt gccagtcttg aaggcccagg
     1141 cggatatcta caaggctgac ttccaagctg agaggcatgc ccgggagaag ctggtggaga
     1201 agaaggagta tttgcaggag cagctggagc agctgcagcg cgagttcaac aagctgaaag
     1261 ttggctgcca tgagtcagcc aggattgagg atatgaggaa gcggcatgta gagactcccc
     1321 agcctccttt actccctgct ccagctcacc actcctttca tttggccttg tccaaccagc
     1381 ggaggagccc tcctgaagaa cctcctgact tctgttgtcc gaagtgccag tatcaggctc
     1441 ctgatatgga cactctacag atacatgtca tggagtgcat agagtaggag cagcagatgc
     1501 aaggccactt gcagtactat gtcctgatct gtgtgacttg tgctttcctg ttttacctgc
     1561 atagtccaca cttaagggct tgctttagcc ctttggtccc ccatttaggg tagacagccc
     1621 cattcagggc tttttttttt ctgtgtgcct gatccagttt gcctctggtg gcttcttccc
     1681 tcttctccca tagtcctagg gagtctagaa tggaggccag gggctcttag ggagcatccc
     1741 ttctccaagc aggtctgggt acagcttttc ttctctccaa ctggtacctt tcttgccggt
     1801 gaactgcagg ctctcctccc agggcatgtg gcacttgggt ctataacatg tgttacctct
     1861 ggtagacatg tggaaagtat tctgtccttt tgttactgta attaatggtg tagtgaaagt
     1921 acttgtacac tgatctgtgt gtacctttag gacagatgct tagatgtgac attggatcct
     1981 tgccctggag gaggtgggca gacctttgga tttttgccat ctctaagata taccattctt
     2041 tactaaagaa tttgcttaag tgtctttttc tggggcatgt gggccctttt taattcctct
     2101 gatgtaactt ggattttcat aattcctacc catttttctg ttgggacatt gccatttgtt
     2161 cttgggcttt gtagagcttt ttgattatca gtcaggttgg ttttgactat tacagaagtg
     2221 caccccttgt tccacattga ttgttagtgt tttggggcct agaagctgtt ttatactcct
     2281 acttacccat tctttactcc tagttttttg actttggaat tatgactgct ttgtcaacag
     2341 aaaggtattt cacatgtatg ctttcctttt tctagcccca gtgtgctctt gtttttgcca
     2401 agcacattgt taccttctgt gaatggtggt ggccatagtt catcacactc ctggagtttg
     2461 tgatcacatg ttcttcacca gccaaaatgt cctagggaac catttagcag tgactgactg
     2521 atcacagaaa agggaacact tcacttgttt tgcaaggttc tagacatttt gtgggacctt
     2581 accgtcattg gtattagacc tgcagttcta gtaaaggaaa ggaagttgta gttgagaaag
     2641 caataaatat gccttgctca ttccttaggt ctaaatcctt cctgccctcc tgtaagcttt
     2701 catggttctg agtggtatct gtgaatccat cccgggggct tttatttaca tggtttcttt
     2761 cccattaaga gtgagaaggc taagtagaat tcagattata aaaaaggatt taaaaagtaa
     2821 tcctgagctg ggggctttct cggaattttc aggggatgca gagtaagttt tccatttcct
     2881 aattcccagg tatctatcag aaagatcttt aggaaaatgt taaaggaaca aacaagttct
     2941 ttgcttatgt gttttcattt aaatacctaa tctataattt tcctttagga atactattgg
     3001 tttaggttga gtccagtttt gtggtggtat atatcacttt tctatagctg ctttaaaatt
     3061 tttcctaaac ttggaagagc aagaacaaca acaacaacaa caacaacaac aaatcactct
     3121 ttcctgtctg gaagccacat attaagtttt ttctggaggc tgtgagaatc aattccaggc
     3181 attctcttaa ctttcagtgg tttgtggtag tccttggtgt tgcttggctc atagacccat
     3241 cactccagtt tctggttcta gggccttgtg gtttcttcct ctcttctgtc tcataaggaa
     3301 accatgttgt gcatgtgggg tctatttgat tagattaagg aggatctcca gttcaagacc
     3361 cttaactcat tccacctacc aagatccttt ccccaaataa agtcttgttc tcacattatg
     3421 ggggtttggg cttatataac ccggagtatg gatatcatca gaacctgagt aaatgcagcc
     3481 caaaggcagg gcctttaaag ccttgtaatt ctgctagaga gacctggtct ctagggtgat
     3541 gaccagtagt cttcagagtt tgaaggcaga cccttgtcag tgcttgatgc tgttagtagg
     3601 gtcagtggga atgattggga aaggcaggtt ggctatagta ggagagagct gttgggctgc
     3661 ctgcagtggc tgcatgagct tcacgcttct tggataaaca gagatgcata ggtgcatttc
     3721 tgaccagtac tttatcctga aagggtccca gaaagcaggt gtgacccagg ttacacagta
     3781 ggaagcttga aaacatgggc ttcatgcact ggtcaagaca aatctgaggg tggcacaagg
     3841 taatggttgg gacctagtac ccttctagaa ggtgggagcc cttgccaccg acttaccctg
     3901 cagtatggtg tatgattaac cgtacatcaa agatttgaga ttctaccatc tttttgacat
     3961 gagacatgct cttttctttt gcagaattac ttaagctaga actggaaaaa gtggtcgttc
     4021 cattcccctc aggaattagt ctacttgctt ttgcacaaat tttatgtggc ctctggcaga
     4081 caacttttag atccatacag ctagaagcat gccctttcca gaagacctgt tctggaatag
     4141 atagtgcttc ttatgtatgc tctcttcctg ttggcccatg cccaagagaa aaccagagag
     4201 ccagtaagac agtacagagt gcttcaccta ctgaagtaat aaacgataag gcagattgta
     4261 ggtaggaatg atatctaaaa aggaacaatt gcagccctgt gtgtgacacc ctcaggcaag
     4321 gtaaggccta ccttttagtg tttccccttt caaggtggga gtttggagag atgaacaagc
     4381 actttggaag catccccagc cctctttacc tgacaacagt ttggtcctca cagtgactgc
     4441 ttcattggag tgcctctcca gtgttatggc accatcatct gttaccaccc aaggctgtga
     4501 tgaaataaga tacaacatat ccgatgacac aggcctgcat ggctagcatc ttgaacattt
     4561 tattacatga acattctctg tacgatggta taaaaaggcc cgaggattaa attatgtata
     4621 aaatatgaaa taaagaagta agactttcaa gcatgcactc tgtcctccct tgttggatgt
     4681 aggggtagga ttgccagtaa caaaggtttt ctttgctatt tctatctctt taattcccct
     4741 gtattacata ggaagtagct gttacacaca gctctgaggt ttcttctgcc tatggctgag
     4801 gaaagctcat tattgacaca acagagtggt gaaaggggcc aagtcaacta atttggggct
     4861 tgaatttcct gtggttgcag caacaaagta ccacacgtta gggagcttag gcaacagatt
     4921 tcctctccct gttaaggatg gcaggcatct gagaagtggg ttcctcataa gggataaccc
     4981 attccagtgc ccctctccag tgtgtggcag gtcccagaaa ttcttagttt tctctagttg
     5041 tacctgcatc tctgcctctg ccacttttgt cacatggcca tcttgtgttt cctttttata
     5101 agcacaccag tgttgtatac aggtgggtat ttggaaacat ggaagcattt tgttcagtat
     5161 ctagtgacag tgatggaaag agatgatttg cagagaaggt cagagcagca tgagggtctt
     5221 aggtatggag ctgcagccaa cattatggac atggaagaga gggattgctg gacttttggt
     5281 ttcctgcctg ggtacctgga caatctatct accattggga ggactaggta acagtggaag
     5341 ttagttatga gagaagttgt ttgatgttca attctgatct agccaggctc agtgtgagat
     5401 gtcctgggtc ccttcatctt gccttgactg ttaggtgcag tttcatattg aaactgcagg
     5461 ctctttttta tccattgcta ctggcaacca gtgtgatctg gtaaatctgt ttccactttg
     5521 cttagtgctc tccactgatt ttctgttact tgagacctaa actccatctt cagccttgtg
     5581 ttgatctaat gtcatgtcaa cttctctaaa agctcagcca attctacact ggccttctat
     5641 tcctttcctc aaaccactta gcactttttt tttttaaatt tttttagatt tatttattta
     5701 tttattatat gtaagtacac tgtagttgtc ttcagacact ccagaaaagg agtcagatct
     5761 tgttacggat ggttgtgagc caccatgtgg ttgctgggat ttgaactcca gacctttgga
     5821 agagcagtag ggtgctctta cccactgagc catctcacca gcccagcact tctgtttctt
     5881 aaggctgttg ctcctgttgt ctcctttgct gagaaagttc tgttccctaa tttgtactgt
     5941 tgactacttt ttgtcatcca tataagtgta aacaaaagtt ctttcatctg atctcttcat
     6001 cctaaatcat actaccctgt tttaactcac attactacca ctgacctttt ctagtgtttt
     6061 tttcttttct accactagag ggagacagaa gccgtatcaa tttagtcgta tactcaacac
     6121 agggaaactg catttactga tggctgagct tgtctgagac gatatcagga ttcccctgcc
     6181 aatatcttca tggacgtcac ttgtcaccat aattggtgac ttatagaagt tattaatgta
     6241 ctagaaatta tagtacagaa atcttatttt aggactatag taccaatagc ctttttttgt
     6301 ggtgctgggg atagaaccca gggtctttca catgtaagca ttcataccat cactgagcta
     6361 caatccctgg ttatcagctt ctcactttat ttaccttccc ctgactttga cagccctgtc
     6421 tagtttggaa cttattatgt aatccacgat ggccttgaat ttacagccat cctcagcctc
     6481 tccagtgcta ggattataaa tatatctgac tagcttattt ttttcatttt gttcaggttt
     6541 ttaatgagtg tcttggtttc agatatgaaa aacagaattt ggaagaaagc cagttgggcc
     6601 agtctgtggt agagcatgca ctcaaagttg aagcaagatg ttaatgagtt ctaggctggc
     6661 ttaggcttca tagcaagatc ctatctcata aaacaaaaag ttaactggtg attccctgga
     6721 ggtgagaggg gtgaggagag agtgatagtt aatgaataca aagttctttg agggaaaatg
     6781 agaatattct gaaattggct atggcgatac tcatacattt gtgaatgtgc aaggaacact
     6841 tcagatgaat gacttttgtt gtatatggat taggttgcaa taaaactggc atttaaaatg
     6901 tta
//
