LOCUS       XM_036153764            3392 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus inhibitor of kappaB kinase beta (Ikbkb),
            transcript variant X5, mRNA.
ACCESSION   XM_036153764
VERSION     XM_036153764.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..3392
                     /gene="Ikbkb"
                     /gene_synonym="IKK-2; IKK-B; IKK-beta; IKK2; IKKbeta;
                     IKK[b]; NFKBIKB"
                     /note="inhibitor of kappaB kinase beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 mRNAs, 15 ESTs, 460 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16150"
                     /db_xref="MGI:MGI:1338071"
     CDS             788..2224
                     /gene="Ikbkb"
                     /gene_synonym="IKK-2; IKK-B; IKK-beta; IKK2; IKKbeta;
                     IKK[b]; NFKBIKB"
                     /codon_start=1
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit beta isoform X4"
                     /protein_id="XP_036009657.1"
                     /db_xref="GeneID:16150"
                     /db_xref="MGI:MGI:1338071"
                     /translation="MLMWHPRQRGTDPQYGPNGCFRALDDILNLKLVHVLNMVTGTVH
                     TYPVTEDESLQSLKTRIQEDTGILETDQELLQEAGLVLLPDKPATQCISDSKTNEGLT
                     LDMDLVFLFDNSKINYETQITPRPQPESVSCILQEPKRNLSFFQLRKVWGQVWHSIQT
                     LKEDCNRLQQGQRAAMMSLLRNNSCLSKMKNAMASTAQQLKAKLDFFKTSIQIDLEKY
                     KEQTEFGITSDKLLLAWREMEQAVEQCGRENDVKHLVERMMALQTDIVDLQRSPMGRK
                     QGGTLDDLEEQARELYRRLREKPRDQRTEGDSQEMVRLLLQAIQSFEKKVRVIYTQLS
                     KTVVCKQKALELLPKVEEVVSLMNEDERTVVRLQEKRQKELWNLLKIACSKVRGPVSG
                     SPDSMNVSRLSHPGQLMSQPSSACDSLPESDKKSEELVAEAHALCSRLESALQDTVKE
                     QDRSFTTLDWSWLQMEDEERCSLEQACD"
ORIGIN      
        1 acgtcagggc aggaagtgtt tgaggaagtg gcgctgggct ggctgcgtgg ggaccccgag
       61 ttttcatgtc ctcagcgggt gtcgctggcg gccccgcggc ccccggggca gagttagcag
      121 ggcatcgata tgagctggtc accgtccctc ccaacccaga catgtggagc ctgggaaatg
      181 aaagaacgcc tggggaccgg gggatttgga aacgtcatcc ggtggcacaa tcaggcgaca
      241 ggtgaacaga tcgccatcaa gcaatgccga caggagctca gcccaaagaa cagagaccgc
      301 tggtgcctcg aaatccagat catgagaagg ctgaaccatc ccaatgtggt ggctgcccgg
      361 gatgtcccag aggggatgca gaacctggca cccaatgatt tgccactgct ggccatggag
      421 tactgccaag gaggagatct ccgaagatac ttgaaccagt tcgagaactg ctgtggcctg
      481 cgggaaggag ctgtccttac cctgctgagt gacatcggcg ccagagcttc tggagcagca
      541 gaagtacacc gtgaccgttg actactggag cttcggcacc ctggccttcg agtgcatcac
      601 tggcttccgg cccttcctcc ctaactggca gcctgtgcag tggcactcca aagtccggca
      661 gaagagcgaa gtggacatcg ttgttagtga agacttgaat ggagcagtga agttttcaag
      721 ttcgctaccc ttccccaata atcttaacag tgtcttggct gaacggctgg agaagtggct
      781 gcagctgatg cttatgtggc accctcggca aaggggcacg gatccccagt atggccccaa
      841 cggctgcttc agagccctgg atgacatctt gaacttgaag ctggttcatg tcttgaacat
      901 ggtcacaggc accgttcaca cataccccgt gacggaggat gagagtctgc agagcttaaa
      961 aaccagaatc caggaagaca cggggatcct ggagacagac caggagctgc tgcaagaggc
     1021 agggctggtg ctgctccctg acaagcctgc tactcagtgc atctcagaca gcaagacaaa
     1081 cgagggcctc acgttggaca tggatcttgt ttttctcttt gacaacagta aaatcaacta
     1141 tgagactcag atcacccccc gaccccaacc ggaaagtgtc agctgtatcc ttcaggagcc
     1201 caagcggaac ctctccttct tccagctgag gaaagtgtgg ggccaagtct ggcacagcat
     1261 ccagacgctg aaggaagact gtaaccggct gcagcaggga cagcgagcag ccatgatgag
     1321 tctcctccgg aataacagct gcctctctaa gatgaagaac gccatggcct ccacggccca
     1381 gcagctcaag gccaagctgg acttcttcaa aaccagcatc cagatcgacc tggagaagta
     1441 taaagagcag accgagtttg ggatcacctc agataaattg ctgctggctt ggcgggagat
     1501 ggagcaggct gtggagcagt gtgggcggga gaatgacgtg aagcatctag tagagcggat
     1561 gatggcactg cagactgaca ttgtggacct gcagaggagc ccgatgggtc ggaagcaggg
     1621 gggcaccctg gatgacctag aggaacaagc gagggagctc taccgaagac tcagggagaa
     1681 gccaagagac caaaggacag aaggtgacag ccaggagatg gtacggctgc tgcttcaggc
     1741 aatccaaagc tttgagaaga aagttcgggt gatttataca cagctcagta agaccgtggt
     1801 ttgtaagcag aaggcactgg agttgctgcc caaggtagaa gaggtagtga gccttatgaa
     1861 cgaggacgag aggaccgtgg tccggcttca ggagaagcgg cagaaggaac tctggaacct
     1921 cctgaagatc gcctgtagca aagtccgagg tcccgtgagt ggaagcccag acagcatgaa
     1981 tgtgtctcga ctcagtcacc ctggtcagct aatgtcccag ccttccagtg cctgtgacag
     2041 cttacctgaa tcagacaaga aaagtgaaga actggtggcc gaagcccacg ccctctgctc
     2101 ccggctagaa agtgcgctgc aggacactgt gaaggagcaa gacagaagct tcacgactct
     2161 agactggagc tggttacaga tggaggatga agaaaggtgt agcctggagc aggcctgtga
     2221 ctgaggtgcc catgagctgg cccgtggctc tgcatgtgac gatgttctgg tatctccagg
     2281 tggacatctc actctgccag cagctgtgat acttgcccgc agcagcctag gctggccctg
     2341 tccacacact ggattctcgc ccacagaagc acaacaatgc aggtacaagc acttgcagca
     2401 gcgacgcttc atggctgctg tacaaagaaa gcgacacaga gaaatgacaa gtgtctatct
     2461 tgagtgtttc cagacagcag acagcctgtc tgctttggac tcctggggga ggaagctctg
     2521 ccctgcccac ccctcctctc cttacagctg gacgtcatcc ggatccagct ctcttagaca
     2581 gttaatccta agtttgacta tcctatatct ctcttcctct tcacttctcc cctggtaaat
     2641 gtttcaacct tctgtgctgg tcgctgtggc aaacgacctt tgactatgct gtagtgatgg
     2701 cgatgccaaa ctccctgctg tttctggtcc tttaagccac aaagtgactt acaaagccag
     2761 gcagaacaga aatgcagcta catatcttga gtcccaaaga ttacctagaa tcaattgtca
     2821 cagagaaaaa aggaagatga aggtgttatg ccaactacta ccctactgaa cactgcgact
     2881 cctgggtgcc tgtcaggtgt gtgtggatat tgctgcctct taaattagct agcaatatta
     2941 ttaaattggt tcattttata aatagtttct attttttgta acattactca gatatgtatc
     3001 ctgggctcaa aggtgtattt ccatagtata ccatcactag tacttctgag ctcaaaactc
     3061 aacatcatgg gaaagtttgt aaaattgaat agtgtgtcta tgtctagatc atgagccatt
     3121 tttaacatca cacaaaactt gtgtgtttgt gtgcatgtgt gtgtgtaaaa gcaaaaaccg
     3181 gctcaggtta tcataggcag gtatatttaa ttagagaata cgtaacgctg gagcagagaa
     3241 atgtcagagt ggccaccgca gaggcagtat gaagcatcga cggtcaaatg agttcagagg
     3301 tgctgcacgc tttgattgtt cctgagagat tgacactgtg cactggtaaa ctgtctgaaa
     3361 gctctgacaa taaagatgct ggcttaagct ca
//
