LOCUS       NM_198610               2017 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus immunoglobulin superfamily, member 21 (Igsf21), mRNA.
ACCESSION   NM_198610 XM_131808
VERSION     NM_198610.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Botella-Lopez,A., Garcia-Lopez,R., Pombero,A. and Martinez,S.
  TITLE     Radial glia fibers translate Fgf8 morphogenetic signals to generate
            a thalamic nuclear complex protomap in the mantle layer
  JOURNAL   Brain Struct Funct 224 (2), 661-679 (2019)
   PUBMED   30470893
REFERENCE   3  (bases 1 to 2017)
  AUTHORS   Tanabe,Y., Naito,Y., Vasuta,C., Lee,A.K., Soumounou,Y.,
            Linhoff,M.W. and Takahashi,H.
  TITLE     IgSF21 promotes differentiation of inhibitory synapses via binding
            to neurexin2alpha
  JOURNAL   Nat Commun 8 (1), 408 (2017)
   PUBMED   28864826
  REMARK    GeneRIF: IgSF21 interacts with neurexin2alpha to induce presynaptic
            differentiation of inhibitory synapses, and mice lacking IgSF21
            exhibit deficits in inhibitory synaptic transmission
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2017)
  AUTHORS   da Silva,S., Hasegawa,H., Scott,A., Zhou,X., Wagner,A.K., Han,B.X.
            and Wang,F.
  TITLE     Proper formation of whisker barrelettes requires periphery-derived
            Smad4-dependent TGF-beta signaling
  JOURNAL   Proc Natl Acad Sci U S A 108 (8), 3395-3400 (2011)
   PUBMED   21300867
REFERENCE   5  (bases 1 to 2017)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB867903.1 and BC055811.1.
            
            On May 1, 2010 this sequence version replaced NM_198610.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC055811.1, AK137439.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-27                BB867903.1         2-28
            28-2017             BC055811.1         1-1990
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 71.09 cM"
     gene            1..2017
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /note="immunoglobulin superfamily, member 21"
                     /db_xref="GeneID:230868"
                     /db_xref="MGI:MGI:2681842"
     exon            1..510
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            511..623
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            624..745
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            746..864
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            865..980
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1455
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..1541
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            1542..1734
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            1735..1773
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     exon            1774..2000
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1974..1979
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /note="hexamer: ATTAAA"
     polyA_site      2000
                     /gene="Igsf21"
                     /gene_synonym="Gm141"
                     /note="major polyA site"
ORIGIN      
        1 gagcgcgggg cagagcgcgg cggcgcgggc agagcttcgg ctccaaactc cgccactgcc
       61 gccacggatc cgactccggc cgccgtggcc gcctatcgca gccaaccagc cgggagcagc
      121 tgcgcgcccc agccaggtcc ggtgcagccc ggagcagcca gtgcgtctgg tgcagcccgg
      181 agcatcctat tacagcccag agtagcctgg tggtgcagcc cggagcatcc cggtacagcc
      241 cagagcagcc ccgggtagcc tggcggccgg gctacagtag catggggacc tcccctcggc
      301 tctcctcgcc tctcgtcacc gccacggccg gcggcccggg tcacaagcgc ttctgagccc
      361 atggcgaggg gacccaccgc cgccactgcg atcgctgccg ccgccgccgc ctcggccagc
      421 gccgccagct tctggacacc atgcaagctg ctccaagcct ccgccgcgct tcctgcctgc
      481 tgctcgccgc gattctggac ctggcacgcg gctacctgac agtcaacatt gagccccttc
      541 cccctgtggt ggctggggac gcagtgaccc tgaagtgtaa cttcaagaca gacggccgta
      601 tgcgtgagat cgtgtggtac cgggtgacag atggcggcac catcaagcag aagatcttca
      661 cgtttgacgc catgttctcc acgaactact cgcacatgga gaattaccgc aagagggagg
      721 accttgtgta tcagtccacc gtgaggctgc ccgaggtccg gatctcagac aatggtccct
      781 atgagtgcca cgtgggtatc tacgaccgag ccacgaggga gaaggtggtc ctcgcctcag
      841 gcaacatctt cctcaatgtc atggctcctc ccacctccat cgaagtcgtg gctgctgact
      901 cccctgcccc ctttagccgg taccaggccc agaacttcac actggtctgc atcgtgtcag
      961 gagggaagcc ggcgcccatg gtttatttca aacgggacgg ggagccgata gatgccgtgc
     1021 ccctgacaga actgccagca gccagctctg gcccagtcca ggacagcagg cccttccgaa
     1081 gccttctgca ccgagacgtg gatgatacca aaatgcaaaa gtcactgtcc cttctggaca
     1141 ctgaataccg ggctggacgt ccctacacgg agcgccccgc gcgcagcctg acccaggacc
     1201 ccagcctctt cgtgcagccc accacggaaa acatcccaga gacagtggtg agccgagagt
     1261 tcccccgttg ggtacacagc gccgagccgg tctacttcct gcgccacagc cgcaccccag
     1321 gcagcgatgg cacggtggag gtgcgggccc tgctcacctg gaccctcaac ccgcagatcg
     1381 acaatgaggc cctcttcagc tgtgaggtca agcacccagc gctgtccatg cccatgcagg
     1441 cggaggtcac gctggttgct cccaaaggac ccaaaatcat gatgacgccc agcagagccc
     1501 gggttgggga cacagtgagg atcctagtcc acggatttca gaatgaggtc ttcccagaac
     1561 ccatgttcac gtggacgaga gtgggcagcc gcctcctgga tggcagtgcc gagtttgacg
     1621 ggaaggagct tgtgctggag cgggttcctg ccgagctcaa cggctccatg taccgctgca
     1681 ctgcccagaa ccccctgggc tccactgata cacacactcg gctcatcgtg ttcgaaaacc
     1741 caaatatccc aagaggaaca gaggactccc gtggttctgc ttccggcccc gctggcgtcc
     1801 ggctcaccct ggtgcttgcc ctgacagtga tcctggagct cacgtgaaga tgctgcctcc
     1861 tcccgatgct ccagccgccc ggcatctctg cgatcgattt tcatttcttt tctaaactat
     1921 ttccagtctt gttcttagtc tcggcccatg tcttggcttc ctcactgggt ttaattaaac
     1981 aaacagacca attttcccca aaaaaaaaaa aaaaaaa
//
