LOCUS       NM_001164518            2758 bp    mRNA    linear   ROD 13-MAY-2024
DEFINITION  Mus musculus IgLON family member 5 (Iglon5), mRNA.
ACCESSION   NM_001164518 XM_001474467 XM_357746
VERSION     NM_001164518.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Lee,S.Y., Shoji,H., Shimozawa,A., Aoyagi,H., Sato,Y., Tsumagari,K.,
            Terumitsu,M., Motegi,H., Okada,K., Sekiguchi,K., Kuromitsu,J.,
            Nakahara,J., Miyakawa,T. and Ito,D.
  TITLE     Phenotypic Insights Into Anti-IgLON5 Disease in IgLON5-Deficient
            Mice
  JOURNAL   Neurol Neuroimmunol Neuroinflamm 11 (3), e200234 (2024)
   PUBMED   38657185
  REMARK    GeneRIF: Phenotypic Insights Into Anti-IgLON5 Disease in
            IgLON5-Deficient Mice.
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 2758)
  AUTHORS   Landa,J., Serafim,A.B., Alba,M., Maudes,E., Molina-Porcel,L.,
            Garcia-Serra,A., Mannara,F., Dalmau,J., Graus,F. and Sabater,L.
  TITLE     IgLON5 deficiency produces behavioral alterations in a knockout
            mouse model
  JOURNAL   Front Immunol 15, 1347948 (2024)
   PUBMED   38370417
  REMARK    GeneRIF: IgLON5 deficiency produces behavioral alterations in a
            knockout mouse model.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2758)
  AUTHORS   Fearnley,S., Raja,R. and Cloutier,J.F.
  TITLE     Spatiotemporal expression of IgLON family members in the developing
            mouse nervous system
  JOURNAL   Sci Rep 11 (1), 19536 (2021)
   PUBMED   34599206
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2758)
  AUTHORS   Gu,Z., Imai,F., Kim,I.J., Fujita,H., Katayama,Ki., Mori,K.,
            Yoshihara,Y. and Yoshida,Y.
  TITLE     Expression of the immunoglobulin superfamily cell adhesion
            molecules in the developing spinal cord and dorsal root ganglion
  JOURNAL   PLoS One 10 (3), e0121550 (2015)
   PUBMED   25826454
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154108.3.
            
            On Jun 17, 2019 this sequence version replaced NM_001164518.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK039193.1, SRR7652917.179535.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164142 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-267               AC154108.3         154691-154957
            268-346             AC154108.3         164243-164321
            347-579             AC154108.3         165669-165901
            580-699             AC154108.3         166669-166788
            700-834             AC154108.3         167936-168070
            835-955             AC154108.3         168243-168363
            956-1110            AC154108.3         168859-169013
            1111-2758           AC154108.3         170351-171998
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 28.25 cM"
     gene            1..2758
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /note="IgLON family member 5"
                     /db_xref="GeneID:210094"
                     /db_xref="MGI:MGI:2686277"
     exon            1..267
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            268..346
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            347..579
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            580..699
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            700..834
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            835..955
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            956..1110
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     exon            1111..2758
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2739..2744
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /note="hexamer: AATAAA"
     polyA_site      2758
                     /gene="Iglon5"
                     /gene_synonym="A230106M20Rik; Gm1431"
                     /note="major polyA site"
ORIGIN      
        1 agcaccaccc cccctccctg ggtctgcagc agctccggcc acctcgtcgc gcccccccag
       61 ccccctcccc ccgcccccgc cgccccccgg gccggtgcag ccgcaggcgg ggttcccctc
      121 cccctccccc tctcccccag gctcgcgcgc cccgaccgcc ccctcccctc cccctccgcg
      181 ccgccgcgat gcccccccct gcgcccgggg cccggctccg gctcctcgcc gccgccgccc
      241 tggccggcct ggccgtcatc agccgagggt tgctgtccca gagcctggag ttcagctcac
      301 ctgcggacaa ctatacagtg tgtgaaggtg acaacgccac cctcagctgc ttcatcgatg
      361 agcatgtgac ccgggtagcc tggctgaacc gctccaacat cctgtatgcg ggcaatgacc
      421 gttggaccag tgatccccgg gtgcggctgc tcatcaacac acccgaggaa ttctccatcc
      481 tcatcaccca ggtggggctt ggtgatgagg gcctctacac ctgttccttc cagacccgcc
      541 accagcccta caccactcag gtctacctca tcgtccatgt ccctgcccgt attgtgaaca
      601 tctcctcacc cgtggcagtg aatgaagggg gcaatgtgaa ccttctctgc ctggctgtgg
      661 gaaggccaga gcccactgtc acctggagac agctccgaga cggtttcacc tcagagggtg
      721 agatcctgga aatctcagac atccagcggg gccaggccgg ggaatacgaa tgcgttactc
      781 acaacggagt gaactcggcg cccgacagcc gccgtgtgct ggtcacagtg aattatcccc
      841 cgaccatcac agatgtgaca agcgcgcgca ccgccctggg ccgggctgcc ctcctgcgct
      901 gtgaagctat ggctgtgccg ccggcagatt tccagtggta caaggatgac aggctgctaa
      961 gcagcggttc tgcagagggc ctcaaggtgc agaccgagcg cacccgctct atgcttctct
     1021 tcgccaacgt gagcgccagg cactatggca actacacctg ccgtgcggcc aaccggctcg
     1081 gagcgtccag cgcctccatg cggctcctgc gcccaggatc cctggagaac tcagctccaa
     1141 ggcctccagg gcccctgacc ctcctctctg ccctgagctg gctgtggtgg agaatgtaga
     1201 caccattcag tacagcgcat ccccccctgc agggggcctc aggccaggag cgagaaaaag
     1261 ggggtgagca agcgccagcc acgggtctcc agggggacag aagagctctt agccacagag
     1321 gaagaaagaa gaagaggagg aaggtctttt agagaaccca tcactgtgag ggattatgaa
     1381 aaattatgca tctttctaca gccattctcg ccaccccgtt cacgtttcca attgtgaccc
     1441 acccccagcc accccacacc cctctcttag ctcaggctgt caactggctc gtgtgtgtgt
     1501 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgcgcgt gtgtgtgtga aggtgtgctg
     1561 ggggagggaa ccaggaggca cccctctctg gcacagaccc ccccatggcc cctagccatc
     1621 cctgctgcct gcctctcttc ctttggctgg aggtaggtat gggggcttcg tggtggaagc
     1681 tttgacaaga agattgccag ctttccacct tcccatatat gcatgaacac ctacccctct
     1741 cctccctatt gaaggggcag gtagggtggg tgtcaggtgt cactcagcct ttgtgaatag
     1801 gtggggatct ccatgaaggc tgtttctccc tgctccatca ccagttgcct gcagccagac
     1861 gctccatcac tggctcagtg gcctgaaacc tcccttgccc tgtccctctc ctcccctccc
     1921 ttcccctgaa ctttctggcc ctcttcccgg gccaatcggt gcttccattc aattgatagg
     1981 ctagtggcac ttgtcacctg tctgtctcag tgctttgccc cacccatacc cccaagactc
     2041 cccttggcca cagtggtacc ctccagctgc ccttgggccc cagcagctgg cccataagta
     2101 tgggctctct gacaacctgc tccctggcct ctcaacccat aatacctcca aaggctgctg
     2161 tgaccacaca cacacataca cacacacaca cacacacaca cacagcatgc atacatgcac
     2221 gctcatgcac acacaaacac acatacacat gcacacatgc acgcacacat gcacaccagc
     2281 gactgaccag caatagctcc tggcttcacc tgccccagag tctgtaacta gcagcagttt
     2341 ccccggagtg ggccactgtc atccacacag gaagctgaca ggttctgtgt atgggaacac
     2401 ctcactttgc tacacgtcag gcctcacaga gttgggagag aggagacgca cagacattct
     2461 gagcccaggc agaggcacca tgccaccagc ccaaaatcca gtaaccacac acccaaaatc
     2521 acaccactcc gagcctggtg aagacgaggg cagagagggg caggggggca aggggcagtg
     2581 actgtacctc agacgggggc gtgggcccca tcccacattg tcttccattc ccagggtccg
     2641 ggatggggtg gggaggggga gggcgacaag gggaggtggg aggggggccc tgggggccgt
     2701 gtgttccaat tcatggggag tgttgagacc accacaccaa taaacgcctt tttccaaa
//
