LOCUS       NM_010505                570 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus interferon alpha 5 (Ifna5), mRNA.
ACCESSION   NM_010505
VERSION     NM_010505.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   Baig,E. and Fish,E.N.
  TITLE     Distinct signature type I interferon responses are determined by
            the infecting virus and the target cell
  JOURNAL   Antivir Ther 13 (3), 409-422 (2008)
   PUBMED   18572754
  REMARK    GeneRIF: Infecting virus and the target cell type dictate the
            extent and signature of inducible IFN-alpha5 gene expression.
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Hervas-Stubbs,S., Rueda,P., Lopez,L. and Leclerc,C.
  TITLE     Insect baculoviruses strongly potentiate adaptive immune responses
            by inducing type I IFN
  JOURNAL   J Immunol 178 (4), 2361-2369 (2007)
   PUBMED   17277142
  REMARK    Erratum:[J Immunol. 2007 May 15;178(10):6653]
REFERENCE   3  (bases 1 to 570)
  AUTHORS   van Pesch,V. and Michiels,T.
  TITLE     Characterization of interferon-alpha 13, a novel constitutive
            murine interferon-alpha subtype
  JOURNAL   J Biol Chem 278 (47), 46321-46328 (2003)
   PUBMED   12930842
REFERENCE   4  (bases 1 to 570)
  AUTHORS   Hughes,T.K. Jr., Chin,R., Tyring,S.K. and Rady,P.L.
  TITLE     Distinction of mouse interferon-alpha subtypes by polymerase chain
            reaction utilizing consensus primers and type-specific
            oligonucleotide probes
  JOURNAL   J Interferon Res 14 (3), 117-120 (1994)
   PUBMED   7523540
REFERENCE   5  (bases 1 to 570)
  AUTHORS   Kelley,K.A. and Pitha,P.M.
  TITLE     Characterization of a mouse interferon gene locus I. Isolation of a
            cluster of four alpha interferon genes
  JOURNAL   Nucleic Acids Res 13 (3), 805-823 (1985)
   PUBMED   2987811
REFERENCE   6  (bases 1 to 570)
  AUTHORS   Zwarthoff,E.C., Mooren,A.T. and Trapman,J.
  TITLE     Organization, structure and expression of murine interferon alpha
            genes
  JOURNAL   Nucleic Acids Res 13 (3), 791-804 (1985)
   PUBMED   2987810
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC120911.1.
            
            On Oct 24, 2007 this sequence version replaced NM_010505.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC120910.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-570               BC120911.1         1-570
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 42.03 cM"
     gene            1..570
                     /gene="Ifna5"
                     /gene_synonym="If1ai12; Ifa5"
                     /note="interferon alpha 5"
                     /db_xref="GeneID:15968"
                     /db_xref="MGI:MGI:107663"
     CDS             1..570
                     /gene="Ifna5"
                     /gene_synonym="If1ai12; Ifa5"
                     /note="IFN-alpha-5; interferon 1ai12; interferon alpha
                     family, gene 5"
                     /codon_start=1
                     /product="interferon alpha-5 precursor"
                     /protein_id="NP_034635.2"
                     /db_xref="CCDS:CCDS18345.1"
                     /db_xref="GeneID:15968"
                     /db_xref="MGI:MGI:107663"
                     /translation="MARLCAFLMVLAVLSYWPTCSLGCDLPQTHNLRNKRALTLLVKM
                     RRLSPLSCLKDRKDFGFPQEKVGAQQIQEAQAIPVLSELTQQVLNIFTSKDSSAAWNA
                     TLLDSFCNEVHQQLNDLKACVMQQVGVQESPLTQEDSLLAVRKYFHRITVYLREKKHS
                     PCAWEVVRAEVWRALSSSVNLLARLSKEE"
     exon            1..570
                     /gene="Ifna5"
                     /gene_synonym="If1ai12; Ifa5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctaggc tctgtgcttt cctgatggtc ctggcggtgc tgagctactg gccaacctgc
       61 tctctaggat gtgaccttcc tcagactcat aacctcagga acaagagagc cttaaccctc
      121 ctggtaaaaa tgaggagact ctcccctctc tcctgcctga aggacagaaa ggactttgga
      181 ttcccacagg agaaggtggg tgcccagcag atccaggagg ctcaagccat ccctgtcctg
      241 agtgagctga cccagcaggt cctgaacatc ttcacatcaa aggactcatc tgctgcatgg
      301 aatgcaaccc tcctagactc attctgcaat gaagtccatc agcagctcaa tgacctcaaa
      361 gcctgtgtga tgcaacaggt cggggtgcag gaatctcccc tgacccagga agactccctg
      421 ctggctgtga ggaaatactt ccacaggatc actgtgtacc tgagagagaa gaaacacagc
      481 ccctgtgcct gggaggtggt cagagcagaa gtctggagag ccctgtcttc ctcagttaac
      541 ttgctggcaa gattgagcaa ggaggagtga
//
