LOCUS       XM_011247153            1924 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus interferon-induced protein with
            tetratricopeptide repeats 3 (Ifit3), transcript variant X2, mRNA.
ACCESSION   XM_011247153
VERSION     XM_011247153.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011247153.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..1924
                     /gene="Ifit3"
                     /gene_synonym="Ifi49; P49"
                     /note="interferon-induced protein with tetratricopeptide
                     repeats 3; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 9 ESTs, 57 long SRA reads,
                     18 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 28 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:15959"
                     /db_xref="MGI:MGI:1101055"
     CDS             170..1456
                     /gene="Ifit3"
                     /gene_synonym="Ifi49; P49"
                     /codon_start=1
                     /product="interferon-induced protein with
                     tetratricopeptide repeats 3 isoform X2"
                     /protein_id="XP_011245455.1"
                     /db_xref="GeneID:15959"
                     /db_xref="MGI:MGI:1101055"
                     /translation="MPRHPLTPEAESRAYPMLWPGHRRSQCEVNRESLEAILPQLKCH
                     FTWNLFREGSMSSHMEDRVCNQVEHLNSEEKATMYDLLAYIKHLDGESKAALECLGQA
                     EDLRKSEHNDQSEIRRLVTWGNYAWIYYHMGRLSEAQAYVDKVRQVCQKFANPYSMEC
                     PELECEEGWTRLKCGRNERAKMCFEKALEEKPKDPECSSGMAIAMFRLEEKPEKQFSV
                     DALKQAMELNPQNQYLKVLLALKLLRMGEEAEGERLIKDALGKAPNQTDVLQKAAQFY
                     KKKGNLDRAIELLGKALRSTVNNSPLYSLVMCRYREILEQLQNKGDADSSERRQRMAE
                     LRRLTMEFMQKTLQRRRSPLNSYSDLIDFPEVERCYQMVISKESPDVEEEDLYERYCN
                     LQEYHRKSEDLAALECLLQFPRNERSIEKEEVKEQT"
ORIGIN      
        1 gattgaaacc tgtgtaccac aagggaactc agagagggaa ctcactatca cttctttcaa
       61 aatattttag aatagtttct ttcgtgtggc cccagaaacc tctgcagagt gcactagaga
      121 ctgtggaaaa cactcttttc ctcccagagg gactgtcagg ctggaggaaa tgcctcgcca
      181 ccctctgaca ccagaggcag agtccagagc ttatccaatg ctgtggccag gacatagaag
      241 gtctcagtgt gaggtcaacc gggaatctct ggaagcgatc cttccacagc tgaagtgcca
      301 tttcacctgg aatttattca gggaaggaag tatgtccagt catatggaag acagggtgtg
      361 caaccaggtc gaacatttaa actctgagga gaaggcaaca atgtatgact tattggccta
      421 cataaagcac ctagatggcg aaagcaaggc cgccctggag tgcttagggc aagctgaaga
      481 tttaaggaag tcagagcaca atgatcaatc agaaattcgt cgactggtca cctggggaaa
      541 ctacgcctgg atctactatc acatgggccg tctctcagaa gctcaggctt acgttgacaa
      601 ggtgagacaa gtttgccaaa agtttgcgaa tccttacagc atggaatgcc cagaacttga
      661 atgtgaggaa ggatggacac gcctaaagtg tggaagaaat gaacgagcaa aaatgtgctt
      721 tgaaaaggct ctagaagaga agccaaagga cccagagtgc tcctctggga tggccatcgc
      781 catgttccgc ctagaagaaa aacctgagaa gcagttctcc gtggatgctc tgaagcaggc
      841 catggagttg aatcctcaga accagtacct gaaagttctc ctggccctga aactgctgag
      901 gatgggagaa gaagctgaag gggagcgatt gattaaagat gctttgggga aagctcctaa
      961 tcaaacggat gtcctccaaa aggcagctca gttttacaag aaaaagggta acctagacag
     1021 agctattgag ttacttggaa aagcactgcg atccacagtg aacaacagtc ctctctactc
     1081 tttggtcatg tgccgttaca gggaaatact ggagcagcta cagaataaag gagatgctga
     1141 cagcagtgag agaagacaga ggatggcaga actgagacga ttaacgatgg agttcatgca
     1201 gaagactctt cagaggaggc gaagtccttt gaactcctac tcagatctca tcgatttccc
     1261 ggaagtagag agatgctatc agatggtcat cagtaaggag agccccgatg ttgaggaaga
     1321 agacctctat gagcgctatt gcaacctcca ggagtaccac aggaagtctg aagacctcgc
     1381 agccctggag tgtttgttgc aatttcccag aaatgaaagg tcaatcgaga aggaagaggt
     1441 taaagagcaa acatagcaag cagatcttaa cctccagtag caaattgtgg tggattcttg
     1501 gcagttgcag ggataaagga gtggctgaat ggttttgggg tttgggaggc aacgcacttt
     1561 ggggcacagg caggcttttc ctggcaccat gaacctgagg acaaccggaa gtgtgtcaga
     1621 gtgcagacag acagtctctc agctctgtac tgtgagacag atgtgctgtg gagtgctgct
     1681 tatggggaga atgtgctgaa aaaagcatga gccttcctgc caaggattgc tgacaaactg
     1741 ctcttgattg tttctttaag gaactgcttt ctctccctga ctcctctgct catcctagcc
     1801 atacaatttt ccagtcagca aacctcatta ctaatcatgt agggaatgga gcttaaagca
     1861 gacagagcac cttttgatca catttttttt ctctgcaata aatgacaact cccaacaaaa
     1921 ttca
//
