LOCUS       NM_031367               2279 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus interferon-induced protein 44 like (Ifi44l), mRNA.
ACCESSION   NM_031367
VERSION     NM_031367.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Busse,D.C., Habgood-Coote,D., Clare,S., Brandt,C., Bassano,I.,
            Kaforou,M., Herberg,J., Levin,M., Eleouet,J.F., Kellam,P. and
            Tregoning,J.S.
  TITLE     Interferon-Induced Protein 44 and Interferon-Induced Protein
            44-Like Restrict Replication of Respiratory Syncytial Virus
  JOURNAL   J Virol 94 (18), e00297-20 (2020)
   PUBMED   32611756
  REMARK    GeneRIF: Interferon-Induced Protein 44 and Interferon-Induced
            Protein 44-Like Restrict Replication of Respiratory Syncytial
            Virus.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2279)
  AUTHORS   Wiltshire,S.A., Leiva-Torres,G.A. and Vidal,S.M.
  TITLE     Quantitative trait locus analysis, pathway analysis, and consomic
            mapping show genetic variants of Tnni3k, Fpgt, or H28 control
            susceptibility to viral myocarditis
  JOURNAL   J Immunol 186 (11), 6398-6405 (2011)
   PUBMED   21525387
  REMARK    GeneRIF: Data identified Tnni3k, Fpgt and H28 as likely likely
            candidates for Vms1.
REFERENCE   4  (bases 1 to 2279)
  AUTHORS   Malarkannan,S., Horng,T., Eden,P., Gonzalez,F., Shih,P.,
            Brouwenstijn,N., Klinge,H., Christianson,G., Roopenian,D. and
            Shastri,N.
  TITLE     Differences that matter: major cytotoxic T cell-stimulating minor
            histocompatibility antigens
  JOURNAL   Immunity 13 (3), 333-344 (2000)
   PUBMED   11021531
REFERENCE   5  (bases 1 to 2279)
  AUTHORS   Paul,P.R. and Elliott,R.W.
  TITLE     Analysis of the mouse Amy locus in recombinant inbred mouse strains
  JOURNAL   Biochem Genet 25 (7-8), 569-579 (1987)
   PUBMED   2451911
REFERENCE   6  (bases 1 to 2279)
  AUTHORS   Mobraaten,L.E., Bunker,H.P., DeMaeyer-Guignard,J., DeMaeyer,E. and
            Bailey,D.W.
  TITLE     Location of histocompatibility and interferon loci on chromosome 3
            of the mouse
  JOURNAL   J Hered 75 (3), 233-234 (1984)
   PUBMED   6203959
REFERENCE   7  (bases 1 to 2279)
  AUTHORS   Elliott,R.W.
  TITLE     Use of two-dimensional electrophoresis to identify and map new
            mouse genes
  JOURNAL   Genetics 91 (2), 295-308 (1979)
   PUBMED   447069
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF336221.1.
            
            Summary: This gene encodes a minor histocompatibility antigen that
            is involved in tissue graft rejection and is polymorphic in
            different mouse strains. The 5' region of this gene, including the
            translational start codon and the first 293 amino acids, is absent
            from the C57BL/6J genome. The encoded antigen is not thought to be
            expressed in C57BL/6J. [provided by RefSeq, Mar 2013].
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF336221.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="BALB/c x BALB.B F1"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 76.94 cM"
     gene            1..2279
                     /gene="Ifi44l"
                     /gene_synonym="H-28; H28; H28-1; NS1178"
                     /note="interferon-induced protein 44 like"
                     /db_xref="GeneID:15061"
                     /db_xref="MGI:MGI:95975"
     CDS             85..1434
                     /gene="Ifi44l"
                     /gene_synonym="H-28; H28; H28-1; NS1178"
                     /note="H28c minor histocompatibility antigen 1;
                     histocompatibility 28"
                     /codon_start=1
                     /product="interferon-induced protein 44-like"
                     /protein_id="NP_112735.1"
                     /db_xref="GeneID:15061"
                     /db_xref="MGI:MGI:95975"
                     /translation="MKVTARLTWIEEKILEKLLGNASLTLLYQSSAHKNCVSEMTQKY
                     SLQGSTMTVFHLEKDVVVGVFILENFPRLVSEKPCTCAWFSLKRNNSSGISALFLNTK
                     VIVDSEELIIFSLDGLSLSVTPLRGFTLALNDTVMNGLELNLGHGFLPVECEIFRVDG
                     IKKNPSFIKKMVTAEQHRGKLLSALRAYKPYKDLVSEGSYSLGGPSRLRESRAFSTQW
                     KSAFQGHLTRQAHCGGSDESSITKQYRVYSIKDGKSGETLPFMLCDSMGLEEGEEAGL
                     CIDDIPHILQGCVPDRYQFNPCEPMKPKHSPHAASPPLKDRIHCVAFVLHINSVNTLS
                     DKMVAKLKKIRKDVVDCGIGYVALLTNVEEYDEVLDDSFANMTETVTSLSQVQNVQKW
                     LNIPIANILMVSNYASERRLEPMKDILVFAALRQMLRAADDALEDLLLEDTGNLAPF"
ORIGIN      
        1 tccgcaaccc agaaaaaagg agttctctac tgaagttatc ctctagttca gtctgctccg
       61 ggtcacagca tcagttacag gaacatgaaa gtgacagcca gattgacatg gatagaagag
      121 aagattctgg aaaagctgct tgggaacgca tcattgactc ttctttatca gtccagtgct
      181 cataaaaatt gtgtttctga gatgactcag aaatattctc ttcagggatc cacaatgaca
      241 gtatttcacc tagagaaaga tgttgttgtg ggtgttttta tactggagaa ttttcctagg
      301 ttagtctctg aaaagccatg tacttgtgcg tggttttcat taaaaaggaa taatagttct
      361 ggaatatcag ctttgttttt gaacacaaaa gtaatagttg actctgaaga gctgataatt
      421 ttctcactcg atggtttgtc actcagtgtg actccactta gaggcttcac acttgctcta
      481 aatgatacag taatgaacgg tctagaactc aatcttggac atggctttct acctgtggaa
      541 tgtgaaatct ttcgagttga tggcattaag aaaaatccaa gcttcataaa gaagatggtg
      601 accgccgaac agcaccgagg aaaattactc tctgctctca gagcctacaa gccttataag
      661 gacctggttt cagaaggttc gtattctctt ggtgggccca gtaggctcag ggaaagtcga
      721 gctttttcaa ctcagtggaa gtctgctttc caaggccacc taactcgcca ggcccattgt
      781 ggggggtctg acgaaagcag tatcaccaag cagtacagag tttattctat taaagatgga
      841 aaaagcgggg aaacactccc atttatgctg tgtgattcaa tggggctgga ggagggggag
      901 gaagccgggc tgtgcataga tgacattcct catatcttac aaggctgtgt accagacagg
      961 tatcagttca acccctgtga gccgatgaag ccgaagcact cccctcacgc cgcctctccg
     1021 cccctgaagg acaggattca ctgcgtggct tttgtcctac acatcaactc tgttaataca
     1081 ctatctgata aaatggtggc aaagctgaaa aaaattcgca aagatgtagt agactgtggt
     1141 ataggatatg tagccttgct tacaaatgtg gaggagtatg atgaagttct tgatgacagt
     1201 tttgcaaaca tgacagaaac tgtgacttct ctaagccagg ttcagaatgt ccaaaaatgg
     1261 ctaaatattc ctatagccaa tatcttgatg gtcagcaatt atgcttcaga gcgaaggttg
     1321 gagcctatga aggatattct ggtctttgct gctctcaggc agatgttgag ggctgcggat
     1381 gatgccttag aggacttgct tctcgaggat actggtaacc tggctccttt ctaaagcact
     1441 gccttttggg aaaccctcag ctgtagttca ctggggtgtt tggggaccat tttcctagcc
     1501 ctgacatgta ttgtaatatg tgctagcttc tgcttttgct tgccttgttt tggagcaatc
     1561 tggggattgg cacatgctgc tgtgacatta gtgtccctgg atttagttta aacctgattg
     1621 ccccaagaag aggcactctg ctgaaagcct ttgttaatgt tcgctgtcct tcaacaatga
     1681 gtcacatatt aaaaatgcaa accctgagaa gtggagagag agagaggtcc tcggaaaaat
     1741 gggcttccat atgcccacac catgtacagt tttatatgtg gaggacagag gtgtcagatc
     1801 ccccccggaa ctgaaacagg ctcatgaacc atccagtgtg tgtacacatc tacatgtgtc
     1861 tttctcaagc tccttaggca aaacaaactt ggctttgctt ttccttctcc agtacattat
     1921 acaactctat gtaccggaat tgactgcaca gtagttagaa aatgatgtag atgtctgcta
     1981 ttccaaatgg agcatgagtt cctcgagaaa caggatggat tgcttgtagt cccaaagctc
     2041 atcaacaagg tctaactaag cattaaggga tcctcattat aagtcctctg taccaacttt
     2101 ttttttctaa caatgatatt taacttagtt cacttgtctn tggttgaaag catgcatgta
     2161 tctaaacaca tttaaaggaa ttgaaaagag ccaatatttg ttaacaactt gtttaattat
     2221 agtactgttt taatttcatg aaataaagtt tctgcctgaa aaaaaaaaaa aaaaaaaaa
//
