LOCUS       NM_198004               1511 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus idnK gluconokinase homolog (E. coli) (Idnk),
            transcript variant 1, mRNA.
ACCESSION   NM_198004
VERSION     NM_198004.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC163038.5, CX206109.1, AK045763.1 and AK032811.1.
            
            On Jun 17, 2010 this sequence version replaced NM_198004.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU525297.1, BC026742.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-24                AC163038.5         76481-76504
            25-415              CX206109.1         1-391
            416-1091            AK045763.1         368-1043
            1092-1092           AC163038.5         83106-83106
            1093-1511           AK032811.1         1030-1448
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 30.95 cM"
     gene            1..1511
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /note="idnK gluconokinase homolog (E. coli)"
                     /db_xref="GeneID:75731"
                     /db_xref="MGI:MGI:1922981"
     exon            1..88
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..593
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /EC_number="2.7.1.12"
                     /note="isoform a is encoded by transcript variant 1;
                     probable gluconokinase; gluconate kinase"
                     /codon_start=1
                     /product="probable gluconokinase isoform a"
                     /protein_id="NP_932121.2"
                     /db_xref="CCDS:CCDS36682.1"
                     /db_xref="GeneID:75731"
                     /db_xref="MGI:MGI:1922981"
                     /translation="MEAPGVLLVMGVSGSGKSTVGALLASKLGWKFYDADDYHSEENR
                     IKMAKGVPLSDQDRIPWLCTLHDILLRDVALGQPVVLACSALKKTYRDILIRGGSDAP
                     LKSDDSAKEPLAGGKLLVVYLCGSFDIIYGRLLQRKGHFMPPELLQSQFSILEPPSAP
                     ENFIQVSVDKSLPEITAAVMEALK"
     exon            89..119
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            120..206
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            207..250
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            251..1511
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      745..750
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      767
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /note="major polyA site"
     regulatory      1220..1225
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
                     /note="hexamer: AATGAA"
     polyA_site      1242
                     /gene="Idnk"
                     /gene_synonym="5133401N09Rik"
ORIGIN      
        1 gccccggaag cgggcgctga ggacctggga gcacggtcat ggaggcaccc ggggtgctgc
       61 tggtgatggg tgtgagcggc tccggaaaat ccactgtggg tgcgctgctg gcctccaagc
      121 tgggatggaa attctatgat gccgatgatt accactccga ggagaatcgg ataaagatgg
      181 cgaaaggggt accactgagc gaccaggaca ggattccatg gctttgcacc ttgcacgaca
      241 ttttactaag agatgtggct ttgggacagc ctgttgttct agcctgttca gctctgaaga
      301 aaacgtacag agacatcttg atccgaggag gaagtgatgc gcccctgaaa agtgatgact
      361 cagcaaagga accgctggct ggtgggaagc tcctggtggt ctacctctgc ggctcgtttg
      421 acatcattta tggacgcttg ctccaaagaa aaggacattt tatgccgccc gagttactgc
      481 agtcccagtt tagtattctg gagcccccat cagctcccga aaacttcatc caagtcagcg
      541 tggacaaaag tctcccggag atcaccgctg ccgttatgga agccctcaag tgaagaactc
      601 gttcatagca gagtacactc tgctcccaag ctcctcgccc gtggtgtctt ctgaattctt
      661 tatttttaga ggcagtgttt ctctgttgac cagggtggtc tggaatgcag agatctgcct
      721 gcctctgcca ccccgagggc agggattaaa ggcgtacacc accaccatcg ggctgtactg
      781 taaattctta attggggaaa aaccgcagtg cttggaggca gaagccgttg tttgactgtg
      841 ttaggagttt gtggcatggt tggcagtgtg cagctgtgag aggacagggg gagggtgtta
      901 aaagttaaaa atgcacttga gagatggctc agtggttaag aacactgact gctcttccag
      961 aggtcctgag ttcaaatccc agcagccacg tggtgtctca caaccatctg taaagggatc
     1021 ggatgatctc ttttggtgtg tctgagagct acagtttact cgtgatgtga taaatctttt
     1081 tttttttttt ttaaagttaa agactgaagt ttaaattgac atacaatgaa acctgatggc
     1141 cagaggaaat cctgtaatca gtgctagaaa ttactacctt gcgaaagaac aatagcttgt
     1201 gcctgtatct gtacaaaaga atgaaatttg ctatctcgga aactggtttc agcaatagaa
     1261 accccaacag aaccaagccg cccactgcat gccacacgcc cagtacagtg gcaactactt
     1321 ttaaatattt cacgttagca tagaaaatca taggctccat cttctgtcat ttgctatcta
     1381 taatctcatt tattgtcatt gttattagtg ggttgttgtt acaggtggcc tccaactcag
     1441 acagttgcct ctttctgcct ctccagggct ggattgaagg cttgccccac cataaacgac
     1501 ttcgttttca t
//
