LOCUS       NM_001136181            1258 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus heat shock factor binding protein 1-like 1 (Hsbp1l1),
            mRNA.
ACCESSION   NM_001136181 XM_885191 XM_917141
VERSION     NM_001136181.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK141935.1, BC151118.1 and AC131065.16.
            
            On or before Oct 26, 2008 this sequence version replaced
            XM_917141.2, XM_885191.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK141935.1, BY730079.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-153               AK141935.1         2-154
            154-733             BC151118.1         1-580
            734-1258            AC131065.16        191285-191809       c
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 53.35 cM"
     gene            1..1258
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="heat shock factor binding protein 1-like 1"
                     /db_xref="GeneID:66255"
                     /db_xref="MGI:MGI:1913505"
     exon            1..59
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            60..285
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             235..453
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /codon_start=1
                     /product="heat shock factor-binding protein 1-like protein
                     1"
                     /protein_id="NP_001129653.1"
                     /db_xref="CCDS:CCDS50333.1"
                     /db_xref="GeneID:66255"
                     /db_xref="MGI:MGI:1913505"
                     /translation="MDTRTPEVPCGDLLQNAAENLLLEVEEHFQALTTTLNLRMEEMG
                     SRIEDLQRNVDDLMTQAGIENSIKEPAT"
     exon            286..352
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            353..447
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            448..1258
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      515..520
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="hexamer: AATAAT"
     polyA_site      534
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="major polyA site"
     regulatory      572..577
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      595
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
     regulatory      816..821
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="hexamer: AATAAA"
     regulatory      821..826
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="hexamer: AATAAT"
     polyA_site      837
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
     polyA_site      840
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
     regulatory      937..942
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      966
                     /gene="Hsbp1l1"
                     /gene_synonym="1810005K13Rik"
ORIGIN      
        1 atactcacaa gccatctttt ctgtagcaga caccatgcag gaagagctgc agggggcagg
       61 tcacctactc tgaaggatga aaacacccag caaagccgga ttggccagct gctgctggtc
      121 tggtgcgcac ctgcccccgc gctcgctctc tgggtttacc cgtggccagc tctaagcgcg
      181 acacttgctg ggtccaccta agacccagga ccccggactg ttaagctggt gtggatggac
      241 acccggacgc cggaagttcc ctgtggggac ttgctgcaga acgcggctga gaatctactt
      301 ctagaggttg aagaacattt ccaagctctg actacaacat taaacctcag aatggaagag
      361 atgggaagtc gcatcgagga cttacagaga aacgtggatg acctcatgac tcaggccggg
      421 atcgagaatt ctatcaaaga accagcgacc tgaagatgtt aaacgagtca cgtgggattg
      481 ctaaaacaaa aactacacca tacgtctgag taataataat ctatgcagta tgaattttga
      541 tgttcattta aatttttttt ggacacttaa aattaaaccc agggcctaaa ctataggcaa
      601 gtggctacca acgagctata ccctaaccca ctgaaaacta aaattcactt taacaaatga
      661 agaacaaagc tgggccataa tggcacatgc cttcaacccc agcacttggg tggcagaggc
      721 atgcagccag tctggcctac agagggagtt ccaggacagc cagggctaca cagagaaacc
      781 ctgtctagca aaacaaacaa aatgaaaaga aaagcaataa aataataaca taatccacaa
      841 ggtgactact taccaatgac gagacttgtg aaaaaggaca aattattgca aatcacggaa
      901 gaatgcactc actctattag ttcataccta gtccaaatta aatttctact tggctttaaa
      961 aacggtcata gccttctgat gtaggtgctt ttagttattt ttattttttg tattttgtat
     1021 ttttcacacg gtactatttt atcacattct cacccttccc ctactactct catatccttc
     1081 cctccccatt ctcccagttt caggattttc tttctttctc cccacctccc cccacctatg
     1141 cctatatgcc tctctctgct tcctgagtga tggcatcaaa gatgtgtgcc accaccacct
     1201 ggccaatgtt cttctaagca tatgagcctg ctaatacatt ttttattttt taaaaaaa
//
