LOCUS       NM_021429               2958 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus HCLS1 binding protein 3 (Hs1bp3), mRNA.
ACCESSION   NM_021429
VERSION     NM_021429.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Takemoto,Y., Furuta,M., Sato,M., Kubo,M. and Hashimoto,Y.
  TITLE     Isolation and characterization of a novel HS1 SH3 domain binding
            protein, HS1BP3
  JOURNAL   Int Immunol 11 (12), 1957-1964 (1999)
   PUBMED   10590261
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK040654.1, BC095977.1, AK043263.1, AK084802.1 and BX630393.1.
            
            On Nov 22, 2007 this sequence version replaced NM_021429.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK040654.1, AK154696.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-14                AK040654.1         1-14
            15-1517             BC095977.1         12-1514
            1518-1754           AK043263.1         768-1004
            1755-2085           AK084802.1         1747-2077
            2086-2951           BC095977.1         2084-2949
            2952-2958           BX630393.1         3-9                 c
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 3.85 cM"
     gene            1..2958
                     /gene="Hs1bp3"
                     /note="HCLS1 binding protein 3"
                     /db_xref="GeneID:58240"
                     /db_xref="MGI:MGI:1913224"
     exon            1..65
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..1221
                     /gene="Hs1bp3"
                     /note="HS1 binding protein 3; HSP1BP-3"
                     /codon_start=1
                     /product="HCLS1-binding protein 3"
                     /protein_id="NP_067404.2"
                     /db_xref="CCDS:CCDS49024.1"
                     /db_xref="GeneID:58240"
                     /db_xref="MGI:MGI:1913224"
                     /translation="MQSPAVLRTSRQVQNAHTGLDLSVPQHQEVRGKMMSGHVEYQIL
                     VVTRLAVFKSAKHRPEDVVQFLVSKKYSEIEEFYQKLYSCYPAASLPPLPRKVLFVGE
                     SDIRERRAMFDEILRCVSKDAQLAGSPELLEFLGTRAPGATGLATRDPSVLDDTASQP
                     GDSDEAFDFFEQQDEVQPPTLGLSSKDVEKSLVGEEEEEEEEEEVLDPLGIMRSKKPK
                     KRPEVAVRPKPAPRLTIFDEEVDPDAGLFSSDKKVSETRRPLETTQDSLKLFDDPDLG
                     GAVSLGDPLLLPAASESRGPTSRPEHGDASKELFRVEEDLDLILNLGSEPKPKPQTKP
                     KPLVPAKPALPRKPTLPASVGPSEPGSGPQKQQQIQAMDEMDILQYIRDHDTLAQDSP
                     SLF"
     exon            66..231
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            232..439
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            440..671
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            672..829
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            830..965
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            966..2958
                     /gene="Hs1bp3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2930..2935
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hs1bp3"
                     /note="hexamer: AGTAAA"
     polyA_site      2958
                     /gene="Hs1bp3"
                     /note="major polyA site"
ORIGIN      
        1 gatcccgtga ccgtccgccc gcccgcagcc gacatgcagt ccccggcggt gctccgcacc
       61 tccagacaag ttcagaatgc acacacaggc ctcgacctgt ctgtcccaca gcaccaggag
      121 gtgcggggta agatgatgtc cggccatgtg gagtaccaga tcctagtggt gacccggttg
      181 gctgtgttca agtcagccaa gcaccggccc gaagatgtcg tccagttctt ggtctctaaa
      241 aaatacagcg agatcgagga gttttaccag aagctgtaca gttgttaccc agcagccagc
      301 ctgcccccgc tgcctaggaa ggtcctgttt gtcggggagt ctgacatccg ggagaggcga
      361 gccatgtttg atgagatcct acgctgtgtc tccaaggatg cccagttggc aggcagccca
      421 gagctgctag aattcttagg caccagagcc ccaggggcta cgggccttgc cacccgagat
      481 ccctctgtct tggatgacac agccagccag ccaggggaca gtgatgaggc ttttgacttc
      541 tttgagcagc aggatgaagt gcagccaccc acactgggcc tgagcagcaa ggatgtggag
      601 aagtccttgg tgggagaaga ggaggaggag gaggaggagg aggaggtgct ggatcccctg
      661 ggtatcatgc gctccaagaa gcccaagaaa cgcccagaag tggccgtgag gcccaagcct
      721 gcacctcggc tcaccatctt tgatgaggag gtagaccctg acgcggggct cttcagctca
      781 gacaagaagg tgtctgagac ccggagaccc ctggagacca cacaggactc cctgaagctg
      841 tttgatgacc ctgaccttgg cggggctgtc tccctgggtg accctctact gctgcctgct
      901 gccagtgaga gcagagggcc cacatcccgc ccagaacacg gggatgcctc caaggagctg
      961 ttcagagttg aagaggacct ggacctgatt ctgaacctgg gatctgaacc aaagcccaag
     1021 ccccagacta agcccaagcc tctagtccca gctaagccag cattgcccag gaaaccaact
     1081 ctgcccgcat cagtgggccc gtcagaacct gggtctggac cgcagaagca gcaacagatc
     1141 caagctatgg atgaaatgga catcttgcag tatatccggg accatgacac acttgcccaa
     1201 gactccccca gcctcttctg acttccccac aaccctgcct ttcaccctat gctgggcctg
     1261 gggaggaggc ctgtatgtga ctatgtgggt tctgcttacc aggcagggac tccccagccc
     1321 cagtcccaca tccttctttt ctcttgggct atgggatgga caaggactct ctgcagactg
     1381 tagagctggg aacaccacag gaattaagcc gtatcatgtc cacccagcgg gctatggaaa
     1441 ggagggcatt tgtgagcatg tcttgagatc agaggacagt gcccccacca agggaaagga
     1501 catcttcttc atacttgtac ccactggctc tgccagctca gcatgggaag tggggcttat
     1561 cctgagccta ggctgggcta aaggagaaca tgggacaggc cactctgaac tctctactta
     1621 gcatggctgc tcgggccccc aaggtgtgtt ctgaggagaa agaccagctc tccaggctgc
     1681 cctgacccaa gtcccttctc aggctcttct ggcttccaat gctaagaaga aaacgtagtc
     1741 ccagccttgc ctttctagtg cacggagggc ttccaggacc ccaagccttc tactcccttt
     1801 cccacgagag ggcctggcca gcccatggtc cttggatgtg gctttcaaca aagtaggtct
     1861 tagcatctcc cagagtttag cccatggggt ttgaggctct gaggcctcgt ctgccctcag
     1921 gatctgaact tgctcgtcag cctttctcca gtggagccac cagccaagct gtgcccagag
     1981 caaccctgtg ccttccagta gatggtgttt tgtggagcat agaatgttag aatgtattct
     2041 gtgtgtcagg gacttttttt tttttaatga aacacatttt tttttaaaac aaaatgcagc
     2101 cactttgttc cttgggtcag ttgtgcttca cagaggcatt agaagggccc agttgggtcc
     2161 aagagtcact ttcaggagcc cctgagtggc acagttcaat tgtttgttgc cttcagtatc
     2221 ttgggtcccc agctcctact ctgtagtaag acctacagga tcagactagg agtatcaagt
     2281 ctgacagcct ttcatctcac tgtgtcccct gtcacctgcc tagttctgag caggtgtcca
     2341 agctgttctg tgtaaggacc ggatactctg ctctcctagg ttaaggtccc cagagctgag
     2401 gactgactct agacagcctc cacccaactc tgcttccctt tcaccagcag gccttcaccc
     2461 cctccatctc ttggtgccta gaactcagcc cagtgcccag aagccccttc ctctctgact
     2521 gcggaggaag gttcacgtgg cccaatcttt tgtagagcca ccctactgtg gtccctgggc
     2581 atctttgaac cctagtccct ttatatccat tcctgtgtgc cttggctacc agctctctac
     2641 ctctttcata cacaccttgc acctactttg ggtgacagat gacataggag ccaatgggtg
     2701 tgtaggagct tggatgacca tggactgatc cccacgtggg gtccctaaca gtatctgacc
     2761 tgacctacca ctctctagtg tggctttgcc cactagtggg gacttgtctg ctgtggagct
     2821 tttgggacac cctggcatgg ttgtttgccc cacagatagc atttttccaa tcatgacttc
     2881 ttttgatcac tggtctgtga cctacagcca gtctgtctcc cagttatcca gtaaagtctg
     2941 tgtgtgataa agccagaa
//
