LOCUS       NM_010463                962 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus homeobox C12 (Hoxc12), mRNA.
ACCESSION   NM_010463
VERSION     NM_010463.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 962)
  AUTHORS   Hauswirth,G.M., Garside,V.C., Wong,L.S.F., Bildsoe,H., Manent,J.,
            Chang,Y.C., Nefzger,C.M., Firas,J., Chen,J., Rossello,F.J.,
            Polo,J.M. and McGlinn,E.
  TITLE     Breaking constraint of mammalian axial formulae
  JOURNAL   Nat Commun 13 (1), 243 (2022)
   PUBMED   35017475
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 962)
  AUTHORS   Fernandez-Guerrero,M., Yakushiji-Kaminatsui,N., Lopez-Delisle,L.,
            Zdral,S., Darbellay,F., Perez-Gomez,R., Bolt,C.C.,
            Sanchez-Martin,M.A., Duboule,D. and Ros,M.A.
  TITLE     Mammalian-specific ectodermal enhancers control the expression of
            Hoxc genes in developing nails and hair follicles
  JOURNAL   Proc Natl Acad Sci U S A 117 (48), 30509-30519 (2020)
   PUBMED   33199643
REFERENCE   4  (bases 1 to 962)
  AUTHORS   Higashijima,Y., Nagai,N., Yamamoto,M., Kitazawa,T., Kawamura,Y.K.,
            Taguchi,A., Nakada,N., Nangaku,M., Furukawa,T., Aburatani,H.,
            Kurihara,H., Wada,Y. and Kanki,Y.
  TITLE     Lysine demethylase 7a regulates murine anterior-posterior
            development by modulating the transcription of Hox gene cluster
  JOURNAL   Commun Biol 3 (1), 725 (2020)
   PUBMED   33257809
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 962)
  AUTHORS   Sato,T., Kataoka,K., Ito,Y., Yokoyama,S., Inui,M., Mori,M.,
            Takahashi,S., Akita,K., Takada,S., Ueno-Kudoh,H. and Asahara,H.
  TITLE     Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation
            during axial patterning in vertebrates
  JOURNAL   Elife 9, e53608 (2020)
   PUBMED   32479258
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 962)
  AUTHORS   Shang,L., Pruett,N.D. and Awgulewitsch,A.
  TITLE     Hoxc12 expression pattern in developing and cycling murine hair
            follicles
  JOURNAL   Mech Dev 113 (2), 207-210 (2002)
   PUBMED   11960714
REFERENCE   7  (bases 1 to 962)
  AUTHORS   Peterson,R.L., Papenbrock,T., Davda,M.M. and Awgulewitsch,A.
  TITLE     The murine Hoxc cluster contains five neighboring AbdB-related Hox
            genes that show unique spatially coordinated expression in
            posterior embryonic subregions
  JOURNAL   Mech Dev 47 (3), 253-260 (1994)
   PUBMED   7848872
REFERENCE   8  (bases 1 to 962)
  AUTHORS   Bradshaw,M.S. and Ruddle,F.H.
  TITLE     Identification of the murine Hox-c12 and Hox-c13 homeoboxes on
            yeast artificial chromosomes
  JOURNAL   Genomics 22 (1), 234-236 (1994)
   PUBMED   7959778
REFERENCE   9  (bases 1 to 962)
  AUTHORS   Brannan,C.I., Gilbert,D.J., Ceci,J.D., Matsuda,Y., Chapman,V.M.,
            Mercer,J.A., Eisen,H., Johnston,L.A., Copeland,N.G. and
            Jenkins,N.A.
  TITLE     An interspecific linkage map of mouse chromosome 15 positioned with
            respect to the centromere
  JOURNAL   Genomics 13 (4), 1075-1081 (1992)
   PUBMED   1354638
REFERENCE   10 (bases 1 to 962)
  AUTHORS   Singh,G., Kaur,S., Stock,J.L., Jenkins,N.A., Gilbert,D.J.,
            Copeland,N.G. and Potter,S.S.
  TITLE     Identification of 10 murine homeobox genes
  JOURNAL   Proc Natl Acad Sci U S A 88 (23), 10706-10710 (1991)
   PUBMED   1683707
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC120845.1.
            
            On Feb 16, 2019 this sequence version replaced NM_010463.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC120847.1, AF448482.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 5' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-962               BC120845.1         70-1031
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 58.01 cM"
     gene            1..962
                     /gene="Hoxc12"
                     /gene_synonym="Hox-3.8"
                     /note="homeobox C12"
                     /db_xref="GeneID:15421"
                     /db_xref="MGI:MGI:96194"
     exon            1..631
                     /gene="Hoxc12"
                     /gene_synonym="Hox-3.8"
                     /inference="alignment:Splign:2.1.0"
     exon            632..962
                     /gene="Hoxc12"
                     /gene_synonym="Hox-3.8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagcagcc ggtcgggccc cgcggaaatg ggcgagcata atctcctgaa tcctgggttt
       61 gtggggccgc tggtgaatat ccacacagga gacaccttct acttccccaa cttccgcgcg
      121 tcaggggcac aactcccggg gctgccttcg ctgtcctacc cacgccgcga caacgtgtgc
      181 tcgctgcctt ggccgtcggc cgagccgtgc aatggctacc cacagcccta tctcggcagt
      241 cccgtgtctc tcaacccgcc tttcggccgc acgtgcgagt tggctcgcgt ggaggatagc
      301 aagggttact accgagaacc ctgcgctgag ggcggcggcg ggggcctaaa gcgggaggag
      361 cgcgggcgcg aacccggagc gggacccggg gcagcgctac tgcagctgga gccgtcgggg
      421 ccacctgcgc tcggcttcaa gtacgactac acggcgagcg gcggcggtgg cgacggcagc
      481 acgggacccc cccacgatcc accctcgtgc cagtcactgg aatccgactc cagttcgtcc
      541 ctactcaacg agggcaataa gagcgccagc gctggtgacc ctggctctct ggtttcgccg
      601 ttgaacccag gcggcgggct ctcagccagc ggcgcgccct ggtacccgat ccacagccgc
      661 tcgcgaaaga agcgcaagcc gtattcgaag ttgcagctgg ctgagctgga gggcgagttt
      721 ctggtcaacg agttcatcac acgccagcgt cggagggaac tctcggaccg cttgaatctt
      781 agtgatcagc aggtcaagat ttggttccag aaccggagaa tgaaaaagaa aagacttctg
      841 ctgagggagc aagctctctc cttcttctag ggagcaggac aagcgtgcta gccccagact
      901 aagcttgcct tggtggagca agagggggcg cagcctggga catagtcccg cttacaacgc
      961 ca
//
