LOCUS       XM_011248757            3143 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus homeobox B3 (Hoxb3), transcript variant X6,
            mRNA.
ACCESSION   XM_011248757
VERSION     XM_011248757.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011248757.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3143
                     /gene="Hoxb3"
                     /gene_synonym="Hox-2.7"
                     /note="homeobox B3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 15 ESTs, 7 long
                     SRA reads, 31 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 8 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:15410"
                     /db_xref="MGI:MGI:96184"
     CDS             311..1612
                     /gene="Hoxb3"
                     /gene_synonym="Hox-2.7"
                     /codon_start=1
                     /product="homeobox protein Hox-B3 isoform X1"
                     /protein_id="XP_011247059.1"
                     /db_xref="GeneID:15410"
                     /db_xref="MGI:MGI:96184"
                     /translation="MQKATYYDNTAAALFGGYSSYPGSNGFGYDGPPQPPFQAATHLE
                     GDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSN
                     SNNGGGPSKSGPPKCGAGSNSTLTKQIFPWMKESRQTSKLKNSSPGTAEGCGGGGGGG
                     GGGGGGGGGSSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCR
                     PRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTA
                     GFMNALHSMTPSYDSPSPPAFGKGHQNAYALPSNYQPPLKGCGAPQKYPPTPASEYEP
                     HVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGA
                     APMGPNQHHGPCDPHPTYTDLSSHHAPPQGRIQEAPKLTHL"
ORIGIN      
        1 ggtgagaatc ttaacagaaa ggacccattg aagttcctag agcccttctc ctgaccggct
       61 gtctggagct ctggagggga gatttctcgc ctgccgctcg cgctggggct cgatgtgaat
      121 atatattatg tctgcctgtt ctcccctcgt cggtggctaa ggtcagccgc ttggaacaga
      181 cccgagagga ggggggcaga aaggggaggg gggtccggcg tgtcacgtga cccccagggg
      241 tgccaatgtc cggtcgtgag ggtatcaggc ccttgcaagt tgccacccac tgcccgggcc
      301 tcgcccagcg atgcagaaag ccacctacta cgacaacacc gcagctgcgc tcttcggagg
      361 ctactcctcg taccctggca gcaatggttt cggctacgac gggcctcccc agcccccctt
      421 tcaggccgcc acgcacctgg agggtgacta ccagcgctca gcgtgttctc tgcagtccct
      481 gggcaacgcc gccccacatg ccaagagcaa ggagctcaat ggcagctgca tgaggccagg
      541 cctggcccca gagcccctgc ccgcacctcc gggctcaccc ccacccagcg ccgcacctac
      601 cagtaccact agcaacagca ataacggggg tgggcccagc aaaagcggcc cccccaagtg
      661 cggtgccggc tccaactcca ccctcaccaa acagatattc ccctggatga aagagtcgag
      721 gcaaacgtcc aagctgaaaa acagctcccc cggcacagca gaaggttgtg gtggtggcgg
      781 cggcggtggt ggcggcggcg gcggcggtgg cggcggcagc agcggcgggg gcggcggcgg
      841 cggcggggga ggggacaaga gccccccggg gtcggccgcg tccaagcggg cgcgcacggc
      901 gtacacaagc gcgcagctgg tggagctgga gaaggagttc cacttcaacc gttatttgtg
      961 ccggccgcgc cgggtcgaga tggccaatct gctgaacctc agcgagcgcc agatcaagat
     1021 ctggttccag aaccgtcgca tgaagtacaa gaaagaccag aaggccaagg ggctggcctc
     1081 gtcctctggg ggtccctctc cggccggaag ccccccgcag cccatgcagt ccacggccgg
     1141 cttcatgaac gccttacact ccatgacccc cagctacgac agcccgtccc caccagcttt
     1201 cggcaaaggc caccagaatg cctacgcgct gccttccaac taccagcccc ctcttaaggg
     1261 ttgcggcgcc ccacagaagt accccccgac cccggcgtcg gagtatgagc cccacgtcct
     1321 ccaagctaac gggggcgcct acgggacgcc caccatgcag ggcagtccgg tgtatgtggg
     1381 cgggggtggc tacgcggatc cgctgccgcc ccctgccggc ccctccctct acggcctcaa
     1441 tcacctttcc caccacccct cggggaacct ggactacaac ggggcggccc ctatgggccc
     1501 caaccagcat catggaccct gtgaccctca ccccacgtac acagacctct cctctcacca
     1561 cgcaccgcct cagggtagaa tccaagaagc gcccaaactg acacacctgt gatgggaggg
     1621 gcgggctggg gagggagggg tgaggttaag ggccagggag acggcggact tgggggatgg
     1681 gcgcggttta gagtcctgaa agaggtgtgg gatggggttg tcgccaggtt tccagaaaca
     1741 gaacaggcct ggggtgcctt cccagctccc aggccccctc cccgccccca ggggctgtct
     1801 tttaagtcct ccatgcctgg ttccatctgt ctgccaacaa cccttggaaa ggaatccaca
     1861 gcaggttgga gacgggacca catcaatccc agggttccca gggttccagc actaccaagt
     1921 gggaatttca gattggagag gtgacgtgga gtcgggtaga gggagccaag acaggcaagc
     1981 agggcagaga agcacattca acacttaatg gcttggctat cagcaagcaa tcaacttacc
     2041 ttgcatctct gtgggtaatt tccccaaaat cttgattttt tttgttctcc ctttcagtct
     2101 ccctgtgaaa aataagaaaa tacatttaaa tcgaagggca caaagtatgt ttctctccta
     2161 cttccctgaa gcttcaactc cccccatccc ccatctgtta ggcttcttac tatatctatc
     2221 atttactatg gccctacggt tggttttctg ctctaaggac attcatatct acaccccacc
     2281 cctattgatt acaattttca gagggctcag ggatggtaag atatcctgaa agtcagagct
     2341 gcctataata taaataaata tatatttttt ttcttttaaa gaaaagttaa gaggctaagg
     2401 caggcaagtt gtcaggactg gaggcttgcc cattctccag tctctcagct cccaccccat
     2461 cccactccct ccactttctt tttacttctg ttcttctctt gacttaacgt gaaaacaggg
     2521 tatatttgaa caaactgtct gtcctggcag gtgctgcagc tggacctgtg gaccttgctc
     2581 cagttcctga caggacagtc ttgttgcact tggagtttac attttaatgg atattaaaaa
     2641 aaaaaaaaac aactgtgaga gatgtctggg cctgcagaaa gtccagcttc gctcaaaaag
     2701 cgtgtgttct agtgaacatt ttcatatata tttattggtt atagcctgtt aaaatatttt
     2761 cttttttgta ttatttatcc ccctacatta tgtatttata tgagggacaa aaaaaaaaaa
     2821 gaaaaatgta cttttttagt atttacttgt tataaaggtt gttgtgtttc ctgtcatgta
     2881 aaaccagcta ttttagtttt tattgtattc tagacaagag ctgtagattt atgttaaact
     2941 cgtacatatg aggaattgta attagttcta aaaggcatga actcagctcc taaatgtcac
     3001 tgtatagtcc cgaatttgta gagataagaa gttaattctc tcttggaact ttctttgttc
     3061 ttccgtagtt atttttttcc cccttagtta aaagagttgt ctgtcaaaac aattcttgaa
     3121 taaactttct gttattaatt tta
//
