LOCUS       XM_006532285            4670 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus homeobox B3 (Hoxb3), transcript variant X3,
            mRNA.
ACCESSION   XM_006532285
VERSION     XM_006532285.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006532285.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4670
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..4670
                     /gene="Hoxb3"
                     /gene_synonym="Hox-2.7"
                     /note="homeobox B3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 15 ESTs, 7 long
                     SRA reads, 31 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:15410"
                     /db_xref="MGI:MGI:96184"
     CDS             1838..3139
                     /gene="Hoxb3"
                     /gene_synonym="Hox-2.7"
                     /codon_start=1
                     /product="homeobox protein Hox-B3 isoform X1"
                     /protein_id="XP_006532348.1"
                     /db_xref="GeneID:15410"
                     /db_xref="MGI:MGI:96184"
                     /translation="MQKATYYDNTAAALFGGYSSYPGSNGFGYDGPPQPPFQAATHLE
                     GDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSN
                     SNNGGGPSKSGPPKCGAGSNSTLTKQIFPWMKESRQTSKLKNSSPGTAEGCGGGGGGG
                     GGGGGGGGGSSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCR
                     PRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTA
                     GFMNALHSMTPSYDSPSPPAFGKGHQNAYALPSNYQPPLKGCGAPQKYPPTPASEYEP
                     HVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGA
                     APMGPNQHHGPCDPHPTYTDLSSHHAPPQGRIQEAPKLTHL"
ORIGIN      
        1 caggctccct ttggggtgga aagtcaaggc tgagctcaag ggcaggcagg gtcttagggc
       61 gagaggagag gaaacaaagg ccagtcttag ggaaagagag tttgttctgg aaggacacac
      121 aacacagtta aaggcagaag taggaaagga ggctgctcat tttatttccc ttctccccag
      181 aaaagactct ctcagagaca gggtgtagat ttcccccaca gaggaaaggc tccaaaggag
      241 aggagaggca gcctaaggag ctcacccagc ccagaagtga ctcctggaga cactcagaag
      301 tactgcctga ggtgcctgag gtgcctgcca ctcggattct cttaaggagc tgagagagga
      361 agggcgtaag gcgacagagg gcctgtgaga aagggataga gacaacagag gtggctgagg
      421 ggttgggggg agtctatacc cgtcggaggg ccaactcctt cagactctat aagccattct
      481 ccaaccccac tatgcgaagc tttctgtaca ggaagtggcc tgagctgaga ccttcttaga
      541 aactactgcc tatggagtaa gctcctggaa ggccctagtc aggtgtgaag catcccgggg
      601 acaatttggt atgccagggg aaggccaaga aagatgtccc gggcacgcta gtctcctctt
      661 gcactggaac agtaatcagg gctctttccc aaacaaacgc catcacggca gggagactgg
      721 aacaagactc tgaaacctag aggggaggat cctccttcct cagctccccc tttgaactct
      781 ctttcgaaac ggaggaggag ttagttttac aagaactttc acctccacac ttcttgcctt
      841 aacccttcag tttaacaaac ggatgcttcc ctttcagatc ccctccccct ttcatctttc
      901 aggaaagaaa agaataaaag ggaacctaag caactttaaa aggtctgcag gggaagttgg
      961 ggaaggagga gaaaaagaaa gaaagcaatc cttttgggcc ctccagttct tcccattacc
     1021 tctgttaccc aagctctccc tccttcacag taccccccac cccctcctgc cctgccctgg
     1081 accgtctcct attccctccc ttctccttcg ggcccggaca tatggaaccc atttcgctgg
     1141 tgacattgaa gagccgctgg tgcgcccgcc ttccgccatg gcgcccccga ggcccccgcg
     1201 cttctccgtg gccctgccag tcgccacttc tttcgcccgg cgactcggtc acctctcaga
     1261 ccgggtccca caccaacctg ggtttctcgt agcccggcgc cggccttggt gggaccgcgg
     1321 gctcgcccta ctcggagcat ccctagcagg agctgtgcgg ccggctccgc aggctgaaca
     1381 aagccggggg cgggggcgag gcgcaggccg gcctctttct ccctcacccc cccaaccccc
     1441 agcactgcgg gggtgctccc ggggccaagg gaccaggatg tggccggccc aggcgcatcc
     1501 ccagcccggg ccgagggtcc caggaccggc catcagctct cacgcgttcc ccgcacccgg
     1561 ccgtccgccg cggctcgcac cctagtctga gaccgcacag gaggggagat ttctcgcctg
     1621 ccgctcgcgc tggggctcga tgtgaatata tattatgtct gcctgttctc ccctcgtcgg
     1681 tggctaaggt cagccgcttg gaacagaccc gagaggaggg gggcagaaag gggagggggg
     1741 tccggcgtgt cacgtgaccc ccaggggtgc caatgtccgg tcgtgagggt atcaggccct
     1801 tgcaagttgc cacccactgc ccgggcctcg cccagcgatg cagaaagcca cctactacga
     1861 caacaccgca gctgcgctct tcggaggcta ctcctcgtac cctggcagca atggtttcgg
     1921 ctacgacggg cctccccagc ccccctttca ggccgccacg cacctggagg gtgactacca
     1981 gcgctcagcg tgttctctgc agtccctggg caacgccgcc ccacatgcca agagcaagga
     2041 gctcaatggc agctgcatga ggccaggcct ggccccagag cccctgcccg cacctccggg
     2101 ctcaccccca cccagcgccg cacctaccag taccactagc aacagcaata acgggggtgg
     2161 gcccagcaaa agcggccccc ccaagtgcgg tgccggctcc aactccaccc tcaccaaaca
     2221 gatattcccc tggatgaaag agtcgaggca aacgtccaag ctgaaaaaca gctcccccgg
     2281 cacagcagaa ggttgtggtg gtggcggcgg cggtggtggc ggcggcggcg gcggtggcgg
     2341 cggcagcagc ggcgggggcg gcggcggcgg cgggggaggg gacaagagcc ccccggggtc
     2401 ggccgcgtcc aagcgggcgc gcacggcgta cacaagcgcg cagctggtgg agctggagaa
     2461 ggagttccac ttcaaccgtt atttgtgccg gccgcgccgg gtcgagatgg ccaatctgct
     2521 gaacctcagc gagcgccaga tcaagatctg gttccagaac cgtcgcatga agtacaagaa
     2581 agaccagaag gccaaggggc tggcctcgtc ctctgggggt ccctctccgg ccggaagccc
     2641 cccgcagccc atgcagtcca cggccggctt catgaacgcc ttacactcca tgacccccag
     2701 ctacgacagc ccgtccccac cagctttcgg caaaggccac cagaatgcct acgcgctgcc
     2761 ttccaactac cagccccctc ttaagggttg cggcgcccca cagaagtacc ccccgacccc
     2821 ggcgtcggag tatgagcccc acgtcctcca agctaacggg ggcgcctacg ggacgcccac
     2881 catgcagggc agtccggtgt atgtgggcgg gggtggctac gcggatccgc tgccgccccc
     2941 tgccggcccc tccctctacg gcctcaatca cctttcccac cacccctcgg ggaacctgga
     3001 ctacaacggg gcggccccta tgggccccaa ccagcatcat ggaccctgtg accctcaccc
     3061 cacgtacaca gacctctcct ctcaccacgc accgcctcag ggtagaatcc aagaagcgcc
     3121 caaactgaca cacctgtgat gggaggggcg ggctggggag ggaggggtga ggttaagggc
     3181 cagggagacg gcggacttgg gggatgggcg cggtttagag tcctgaaaga ggtgtgggat
     3241 ggggttgtcg ccaggtttcc agaaacagaa caggcctggg gtgccttccc agctcccagg
     3301 ccccctcccc gcccccaggg gctgtctttt aagtcctcca tgcctggttc catctgtctg
     3361 ccaacaaccc ttggaaagga atccacagca ggttggagac gggaccacat caatcccagg
     3421 gttcccaggg ttccagcact accaagtggg aatttcagat tggagaggtg acgtggagtc
     3481 gggtagaggg agccaagaca ggcaagcagg gcagagaagc acattcaaca cttaatggct
     3541 tggctatcag caagcaatca acttaccttg catctctgtg ggtaatttcc ccaaaatctt
     3601 gatttttttt gttctccctt tcagtctccc tgtgaaaaat aagaaaatac atttaaatcg
     3661 aagggcacaa agtatgtttc tctcctactt ccctgaagct tcaactcccc ccatccccca
     3721 tctgttaggc ttcttactat atctatcatt tactatggcc ctacggttgg ttttctgctc
     3781 taaggacatt catatctaca ccccacccct attgattaca attttcagag ggctcaggga
     3841 tggtaagata tcctgaaagt cagagctgcc tataatataa ataaatatat attttttttc
     3901 ttttaaagaa aagttaagag gctaaggcag gcaagttgtc aggactggag gcttgcccat
     3961 tctccagtct ctcagctccc accccatccc actccctcca ctttcttttt acttctgttc
     4021 ttctcttgac ttaacgtgaa aacagggtat atttgaacaa actgtctgtc ctggcaggtg
     4081 ctgcagctgg acctgtggac cttgctccag ttcctgacag gacagtcttg ttgcacttgg
     4141 agtttacatt ttaatggata ttaaaaaaaa aaaaaacaac tgtgagagat gtctgggcct
     4201 gcagaaagtc cagcttcgct caaaaagcgt gtgttctagt gaacattttc atatatattt
     4261 attggttata gcctgttaaa atattttctt ttttgtatta tttatccccc tacattatgt
     4321 atttatatga gggacaaaaa aaaaaaagaa aaatgtactt ttttagtatt tacttgttat
     4381 aaaggttgtt gtgtttcctg tcatgtaaaa ccagctattt tagtttttat tgtattctag
     4441 acaagagctg tagatttatg ttaaactcgt acatatgagg aattgtaatt agttctaaaa
     4501 ggcatgaact cagctcctaa atgtcactgt atagtcccga atttgtagag ataagaagtt
     4561 aattctctct tggaactttc tttgttcttc cgtagttatt tttttccccc ttagttaaaa
     4621 gagttgtctg tcaaaacaat tcttgaataa actttctgtt attaatttta
//
