LOCUS       XM_030251054            2869 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus 4-hydroxy-2-oxoglutarate aldolase 1
            (Hoga1), transcript variant X1, mRNA.
ACCESSION   XM_030251054
VERSION     XM_030251054.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..2869
                     /gene="Hoga1"
                     /gene_synonym="0610010D20Rik; Dhdpsl; Npl2"
                     /note="4-hydroxy-2-oxoglutarate aldolase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 34 long SRA reads, and 95% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     11 samples with support for all annotated introns"
                     /db_xref="GeneID:67432"
                     /db_xref="MGI:MGI:1914682"
     CDS             894..1517
                     /gene="Hoga1"
                     /gene_synonym="0610010D20Rik; Dhdpsl; Npl2"
                     /codon_start=1
                     /product="4-hydroxy-2-oxoglutarate aldolase, mitochondrial
                     isoform X1"
                     /protein_id="XP_030106914.1"
                     /db_xref="GeneID:67432"
                     /db_xref="MGI:MGI:1914682"
                     /translation="MTVSMAQVGADVAMVVTPCYYRGRMSSAALIHHYTKVADVSPIP
                     VVLYSVPANTGLELPVDAVVTLSQHPNIIGLKDSGGDVTRIGLIVHKTSKQDFQVLAG
                     SAGFLLASYAVGAVGGICGLANVLGAQVCQLERLCLTGQWEAAQELQHRLIEPNTAVT
                     RRFGIPGLKKTMDWFGYYGGPCRAPLQELSPTEEEALRLDFSNNGWL"
ORIGIN      
        1 ggtcgggggt aagggtgggg tgggtggctc caggccctgg cgctgggtaa agaggtccct
       61 gtcagagact gtttttagtg ttgaaacccc aagggccagc tctcttttag gccgtaattg
      121 tggcgtttct ccagcggctt tccagcaggg aagaaagccg gcctggagac tctctagacc
      181 cgcccccgac ctgggacacc cagtgcaaag ctgcacgctc ccaagccatg cccacaggtt
      241 gtggtgggaa cacaaaattt taactgtgta tgtagatcat taacagagcg gggaggaagg
      301 agtccaaact cagttcccct gtggtcacag acagctgagg ctccagacct cccgcagaaa
      361 tgctgggccc ccaaatttgg gcctccatga ggcagggtct gagcaggggc ttgtctagga
      421 atgtgaaggg caagaaggta gacattgccg gcatctaccc acccgtgacc accccattca
      481 ccgccaccgc agaggtagac tatgggaaac tggaagagaa cctgaacaga ctggccacct
      541 tcccctttcg agaagcaaag gaataagaag aaggagagga ggaagaggag gaggaggagg
      601 agaagaagaa gaacaacaac aacaagaaca acaagaacaa gaacaacaag aacaaggaca
      661 acaagaacaa gaagaagaga aggaagagag agagagaaag agagagagag aggaagggaa
      721 aggacaggac aggactgctc ctaggcttcg tggtccaggg ttcgactgga gagtttccgt
      781 tcctgaccag cctcgagcgc ctggaggtgg tgagccgcgt gcgccaggcc atacccaagg
      841 acaagttcct gatagccggc tctggctgcg agtccacgca agccacagta gagatgactg
      901 tcagcatggc tcaggtgggt gctgatgtcg ccatggtggt gaccccttgt tactatcgtg
      961 gccgcatgag cagcgctgcc ctcattcacc actacaccaa ggttgctgac gtttctccaa
     1021 tccctgtggt gttgtacagt gtcccagcca atacggggct agagctacct gtggatgccg
     1081 tggttacatt gtctcagcac ccaaatatca tcggcttgaa ggacagtggt ggagatgtga
     1141 ccaggattgg actgatagtt cacaagacca gcaagcagga tttccaggtg ttggctgggt
     1201 cagctggctt cctcctggcc agctatgctg tgggagctgt tgggggcata tgtggcttgg
     1261 ccaatgtctt gggggcccag gtgtgccagc tggagagact ctgcctcaca gggcagtggg
     1321 aagctgccca ggaactacag caccgtctca tcgagcccaa cactgcggtg acccggcgct
     1381 ttggaatacc agggctgaag aaaaccatgg actggtttgg ctactatgga ggtccctgcc
     1441 gcgccccgtt gcaggagctg agccccacag aggaggaggc actgcgcttg gatttcagca
     1501 acaatggctg gctttaatga caagcaggag acgcctggcc tgagctatct gggacttttg
     1561 ttcccacagc ctgaggagga gcagcagggc attaggaatt agggcttatt tttgtctgtg
     1621 ttctcttgct gtgaaaagac gccaagacca tggcaactca taaaagaaag tgtttaaggg
     1681 tggctggctt acagtttcag aggttcagtc catcatcatc atggcaggga gcatggcggc
     1741 ctgcaggcag tcatggtgct gaagaagaag cagagagttc tacatctaga tctacaggaa
     1801 gcaggaagag aaagctactc ggccttgctt ggacttttga aaacctcaaa gcccacctcc
     1861 agtgacacag cctccaacaa ggccacacct tctaatcctt tcaaatagtg ccactcccta
     1921 agcatttata tatgttaact tgaggggggg gcattcttaa tcaaaccacc acattccgtc
     1981 ccaggcctca taggccctgt agccatatta taatgcaaaa tgcattcagt ccaagttcaa
     2041 aagtttccgt agtctatcag tctgaagact gcttaaaagt ttaaagtgta aagtctcttc
     2101 tgaggctcac tgtaaaatca aaataaaaaa aaaaaacaga tcagatattt ccaacataca
     2161 atgtcacgga atatacactg ctgtgccata agggagaaat gggaacttag aagatactgg
     2221 accaaaacaa gccttaaaac aagctgggca aactccaaac tcggcatctc cacggctgat
     2281 gccaaagtgc tctttagatc tccaactctt ttcagctttg ttgagaacag catgcttctt
     2341 tctcttgggc tggttccact ctctgtcagt agctttcctc agccagtatc ccatgactct
     2401 ggcatctcca acatcacggg ggttccagga ttcgctttca cagcttctcg caatggccgc
     2461 tctgggcctc catgctgaca cacttctgac acacatcaga cacacatctg gcctcagcag
     2521 ctctccttag tcacagaggg agagtctaca acccctttct tgtatcctta actctaaagt
     2581 ctgaaccatg tgtcccaaac tgccaagttc tgccgcttgg tggggctgga accttcccct
     2641 ctcgttcaaa tacacgtagc tggtagctgt ttttgatgga tttcctccat tgtgtaagct
     2701 tttccttcat actgtttccc aactgtttcc caagttgaaa gctttgctgg gtagcatctt
     2761 tctcagggct caccactctc tttattccat ttaacatcag gcttttcttt aaacttttta
     2821 tctccctagg cactgaattt aactctatta aacttccggg tgccccttt
//
