LOCUS       NM_177702                775 bp    mRNA    linear   ROD 10-JUN-2024
DEFINITION  Mus musculus HOATZ cilia and flagella associated protein (Hoatz),
            mRNA.
ACCESSION   NM_177702
VERSION     NM_177702.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Narita,K. and Oyama,T.
  TITLE     Carboxyl Terminus of HOATZ is Intrinsically Disordered and
            Interacts with Heat Shock Protein A Families
  JOURNAL   Protein Pept Lett 29 (11), 971-978 (2022)
   PUBMED   36098411
  REMARK    GeneRIF: Carboxyl Terminus of HOATZ is Intrinsically Disordered and
            Interacts with Heat Shock Protein A Families.
REFERENCE   2  (bases 1 to 775)
  AUTHORS   Narita,K., Nagatomo,H., Kozuka-Hata,H., Oyama,M. and Takeda,S.
  TITLE     Discovery of a Vertebrate-Specific Factor that Processes Flagellar
            Glycolytic Enolase during Motile Ciliogenesis
  JOURNAL   iScience 23 (4), 100992 (2020)
   PUBMED   32248064
REFERENCE   3  (bases 1 to 775)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   4  (bases 1 to 775)
  AUTHORS   Tamplin,O.J., Cox,B.J. and Rossant,J.
  TITLE     Integrated microarray and ChIP analysis identifies multiple Foxa2
            dependent target genes in the notochord
  JOURNAL   Dev Biol 360 (2), 415-425 (2011)
   PUBMED   22008794
REFERENCE   5  (bases 1 to 775)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: 4833427G06Rik is most abundantly expressed in tissues rich
            in highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC119831.6.
            
            On Aug 23, 2018 this sequence version replaced NM_177702.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048587.1, BU939190.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-334               AC119831.6         96567-96900         c
            335-373             AC119831.6         95876-95914         c
            374-444             AC119831.6         94822-94892         c
            445-504             AC119831.6         80936-80995         c
            505-557             AC119831.6         78401-78453         c
            558-775             AC119831.6         76135-76352         c
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 27.81 cM"
     gene            1..775
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /note="HOATZ cilia and flagella associated protein"
                     /db_xref="GeneID:235345"
                     /db_xref="MGI:MGI:1921013"
     exon            1..334
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..615
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /note="UPF0722 protein C11orf88 homolog; protein Hoatz"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein HOATZ"
                     /protein_id="NP_808370.1"
                     /db_xref="CCDS:CCDS40628.1"
                     /db_xref="GeneID:235345"
                     /db_xref="MGI:MGI:1921013"
                     /translation="METGPRGCPSGRKESQEICSPGLLVFTGCSEQDANLAKQFWLGA
                     SMYPTTESQLVLTRGSSQRLPVARNSKVVLREKSSVQPFPFDQDKDAIIFAKAQRIQE
                     SEERAKYLQKAKTRDEILQLLRKQREERISKELISLPYKPKDKVPKSKEVLSESGLRD
                     QEEVKALE"
     exon            335..373
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /inference="alignment:Splign:2.1.0"
     exon            374..444
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /inference="alignment:Splign:2.1.0"
     exon            445..504
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /inference="alignment:Splign:2.1.0"
     exon            505..557
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /inference="alignment:Splign:2.1.0"
     exon            558..775
                     /gene="Hoatz"
                     /gene_synonym="4833427G06Rik; Hoatzin"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agatctacgg aagaagaaac acaggcattc cggtggtggc agttaccaac aggacggttc
       61 tccggtaggg gcgggacgcc agagctaagg aaagcgtcct gagtcaccat ggaaacgggg
      121 cccagaggct gtcctagcgg caggaaggaa tcccaggaaa tctgctcccc tggattactg
      181 gtgttcaccg gctgctctga gcaggatgcc aatttggcta agcagttttg gctcggggcg
      241 tccatgtacc ccactaccga atctcagctc gtgctgaccc gaggcagcag tcagaggcta
      301 ccggtggcgc ggaactctaa agtcgttctg agagagaaaa gttctgtcca gccctttccc
      361 tttgatcagg acaaggatgc aattatcttt gctaaagccc aaaggattca ggaatctgaa
      421 gagagagcaa agtatctcca aaaggccaaa acgcgagatg agattctcca acttttaagg
      481 aaacaaagag aagaaaggat ctcgaaagaa ctgatttcat taccttataa acctaaggac
      541 aaagtgccca aatcaaagga agttttatca gagtcaggcc taagggacca agaagaagtc
      601 aaagccttgg aatgatttga ttgacatatg gtatcgactg actgatatgt gttcaccctt
      661 acagcaagtt atgcttacag caggatcagt aggttaaaga tgtgcagact tccgggaatt
      721 tgacagttac tgaacattca tgttaaaata gactaaaata aattttcaga attca
//
