LOCUS       NM_001081196            5726 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2
            (Hnrnpul2), mRNA.
ACCESSION   NM_001081196 XM_355145
VERSION     NM_001081196.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5726)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5726)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   3  (bases 1 to 5726)
  AUTHORS   Winteringham,L.N., Endersby,R., Kobelke,S., McCulloch,R.K.,
            Williams,J.H., Stillitano,J., Cornwall,S.M., Ingley,E. and
            Klinken,S.P.
  TITLE     Myeloid leukemia factor 1 associates with a novel heterogeneous
            nuclear ribonucleoprotein U-like molecule
  JOURNAL   J Biol Chem 281 (50), 38791-38800 (2006)
   PUBMED   17008314
REFERENCE   4  (bases 1 to 5726)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   5  (bases 1 to 5726)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   6  (bases 1 to 5726)
  AUTHORS   Mu,X., Zhao,S., Pershad,R., Hsieh,T.F., Scarpa,A., Wang,S.W.,
            White,R.A., Beremand,P.D., Thomas,T.L., Gan,L. and Klein,W.H.
  TITLE     Gene expression in the developing mouse retina by EST sequencing
            and microarray analysis
  JOURNAL   Nucleic Acids Res 29 (24), 4983-4993 (2001)
   PUBMED   11812828
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC129217.3.
            
            On Feb 6, 2007 this sequence version replaced XM_355145.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ000354.1, SRR11927936.1881419.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1413              AC129217.3         52200-53612
            1414-1549           AC129217.3         55603-55738
            1550-1626           AC129217.3         56029-56105
            1627-1766           AC129217.3         56329-56468
            1767-1857           AC129217.3         57020-57110
            1858-1970           AC129217.3         57205-57317
            1971-2234           AC129217.3         57659-57922
            2235-2357           AC129217.3         58070-58192
            2358-2486           AC129217.3         58771-58899
            2487-2655           AC129217.3         59443-59611
            2656-2856           AC129217.3         62549-62749
            2857-2930           AC129217.3         63687-63760
            2931-3038           AC129217.3         64024-64131
            3039-5726           AC129217.3         64254-66941
FEATURES             Location/Qualifiers
     source          1..5726
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 5.7 cM"
     gene            1..5726
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /note="heterogeneous nuclear ribonucleoprotein U-like 2"
                     /db_xref="GeneID:68693"
                     /db_xref="MGI:MGI:1915943"
     exon            1..1413
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     CDS             882..3119
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /note="MLF1-associated nuclear protein"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein U-like
                     protein 2"
                     /protein_id="NP_001074665.1"
                     /db_xref="CCDS:CCDS37908.1"
                     /db_xref="GeneID:68693"
                     /db_xref="MGI:MGI:1915943"
                     /translation="MEVKRLKVTELRSELQRRGLDSRGLKMDLAQRLQEALDAEMLED
                     EAGVGGAGPGGACKAEPRPVAASGGGPGGDEEEEDDDEEEDEEALLEDEDEEPPPAQA
                     LGQAAQPPPEPPETSAMEAESEASDTPAEATAGSGGVNGGEEHDNGKGEEDGPEERSG
                     DETPGSEAPGDKAVEEQGDDQDSEKSKPAGSDGERRGVKRQRDEKDEHGRAYYEFREE
                     AYHSRSKSPPPPEEEAKDEEEDQTLVNLDTYTSDLHFQISKDRYGGQPLFSEKFPTLW
                     SGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDFSCSQLGEDEFSYGF
                     DGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSKNGEDLGVAFRISKESL
                     ADRALLPHVLCKNCVVELNFGQKEEPFFPPPEEFVFIHAVPVEERVRTAVPPKTIEEC
                     EVILMVGLPGSGKTQWALKYAKDNPERRYNVLGAETVLTQMRMKGLEEPEMDPKSRDL
                     LVQQASQCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEED
                     WKRRLELRKEVEGDDVPESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYK
                     EEARKLLPPSEKRTNRRNNRNKRNRQNRSRGQGYVGGQRRGYDNRAYGQQYWGQSGNR
                     GGYRNFYDRYRGDYERFYSRDYEYNRYRDYYRQYNRDWQNYYYHHQQDRDRYYRNYYG
                     YQGYR"
     exon            1414..1549
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            1550..1626
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            1627..1766
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            1767..1857
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            1858..1970
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            1971..2234
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            2235..2357
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            2358..2486
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            2487..2655
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            2656..2856
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            2857..2930
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            2931..3038
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     exon            3039..5726
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3621..3626
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /note="hexamer: AATAAA"
     polyA_site      3660
                     /gene="Hnrnpul2"
                     /gene_synonym="1110031M08Rik; Hnrpul2"
                     /note="major polyA site"
ORIGIN      
        1 ccccagcgga ccaacccgga aaaaaaaaat tcccggccac ttctccaata ggaaaaaaag
       61 ccgcacgata tcggaggacc aatcagagca acagactacg attcaagctg gccaacgaga
      121 gaaggaaggg gtggggttgg cgcctctgtt gctgggtaga tgtttaagca cagaaagagg
      181 tcccggcatt gctctctccc tctctctctc tcccttgatg ctggaaaggc ctttccctcc
      241 tggctacgaa aaccctgcac cacccatcct tccagcttgg cttcggttac tagtctcaga
      301 agttacagtc aaagaataag caagagagga catcgagtaa gccctagggt gctccggtaa
      361 ttgggagcgg gcaggaagta agagacctga gatgggcggg actccggcgc gactgcgcag
      421 agcctacgac tgaagtacgg aaagaggagc gcgctcacgc ttccgtgcta cgaggcactt
      481 gagccgcagc cagccttgcc cgactcaggc ccctgtgcgg ctgcgcggtt aggccgcttg
      541 cgctgattgg cccggatctc tgagaggagg gaggggaagt gagggaactc cgtcgtcctc
      601 ggcgcgcact cccccgcggt cgagtacaga gtgtgtcgga agctgctcct cgccgtcttg
      661 ttttgcgctc agtgagccga aaggggcagg gcaggaggaa ggcgacataa acacgccgcg
      721 aagacagcgc ggcctctgcc tctgtgtgcg tgcgcttgct agcgcgggct cagtgctggc
      781 gcgggaggcg gaggcgggcg gcggcggcgc ctgcgcggtc gggctcggtc gacagttcgc
      841 aggggaggag gcggcgggag gcggaggagg cgacggcggc gatggaggtg aagcggctga
      901 aagtgaccga gctgcggtcg gagcttcagc ggcggggcct ggattcgcgc ggcctcaaaa
      961 tggatctggc gcagcgtctt caggaggcac tggatgctga gatgctggag gacgaggccg
     1021 gcgttggtgg ggccgggccc ggtggggcct gcaaggcgga gcctcggcct gtggccgcgt
     1081 cgggcggagg cccgggcggg gacgaggagg aggaggacga cgacgaggag gaggacgagg
     1141 aggcgctgct tgaggacgaa gacgaggaac caccacctgc tcaggctttg ggccaggccg
     1201 cgcagccgcc tccggagccc ccggagacgt cagccatgga ggccgagtcc gaagcttccg
     1261 acacaccggc ggaggccacg gctgggtcag gtggggtaaa tggtggcgaa gagcatgaca
     1321 acggcaaggg ggaggaagac gggccggagg aacggagcgg agacgagact ccgggatccg
     1381 aggcaccggg tgacaaggcc gtagaggaac aaggagatga ccaagatagt gaaaagtcaa
     1441 aaccagcagg ctcagatggt gagcggcggg gggtaaagag acagcgggat gagaaggatg
     1501 aacatggccg agcttactat gaattccgag aggaggctta ccacagccgc tcaaagtccc
     1561 caccacctcc agaagaagaa gcaaaagatg aagaggagga ccagacgctt gtgaacctgg
     1621 acacgtatac ctcggatctc cattttcaaa taagcaaaga ccgatatgga ggccagccgc
     1681 tcttctcaga aaagttccct accctttggt ctggggcaag aagtacttat ggagtaacaa
     1741 agggaaaagt atgctttgaa gccaaggtaa ctcagaatct cccaatgaaa gaaggctgca
     1801 cagaagtctc tctccttaga gttgggtggt ctgttgattt ttcctgttca cagcttggtg
     1861 aagacgagtt ctcctacggt tttgacggaa gaggactcaa ggcagaaaac gggcagtttg
     1921 aggaatttgg ccagactttt ggggagaatg atgttattgg ctgttttgct aattttgaga
     1981 ctgaagaagt tgagctttcc ttctccaaga atggagaaga cttgggtgtg gcattccgaa
     2041 ttagcaagga gtctctggca gatcgagccc ttctacccca tgtcctttgc aagaattgtg
     2101 tcgtagaatt aaactttggt cagaaggagg agcccttttt cccaccacca gaagagtttg
     2161 tgttcatcca tgctgtgcct gttgaggaac gtgtgcggac tgcagtccct cccaagacca
     2221 tagaggagtg tgaggtgatt ctgatggtgg gacttcctgg atctggaaag acccagtggg
     2281 cactgaaata cgcaaaagac aaccctgaga gaagatacaa tgttctggga gctgagactg
     2341 ttctcacgca aatgaggatg aagggacttg aggagccaga gatggacccc aaaagccgag
     2401 acctcttagt tcagcaagcc tcccagtgcc ttagtaagct ggtccagatt gcttcacgat
     2461 caaagaggaa ttttattctt gatcagtgta atgtgtacaa ctctggccaa cgaaggaagt
     2521 tactgctgtt caagacattc tccaggaagg tggtggtagt tgttcctaat gaggaagatt
     2581 ggaagaggag gctggagttg aggaaagaag tggagggaga tgatgtgcct gagtctataa
     2641 tgctggagat gaaagccaac ttctctctgc ctgagaaatg cgactatatg gatgaggtga
     2701 catatgggga gctggaaaaa gaggaagctc aacccattgt tactaaatac aaggaggaag
     2761 caaggaagct actgcccccc tctgagaagc gtacaaaccg ccggaacaac cgcaacaaga
     2821 gaaaccggca gaaccgaagc cgaggccaag gctatgtggg cgggcagcgc cgaggctacg
     2881 acaaccgggc ctacgggcag cagtactggg ggcagtctgg aaacagaggg ggctaccgta
     2941 atttctatga tcgatacaga ggtgactatg aacgattcta cagtcgagat tatgagtaca
     3001 acagatacag agactattac agacaataca accgggattg gcagaattac tactaccacc
     3061 accaacagga cagagaccga tactacagga attactacgg ttaccaaggg tatcggtgaa
     3121 gcccctgctg ttttcgcctg tcagccatga agctgaatct ttgggggtgc caggcacccc
     3181 ctaaaacaca accaaggaaa acaggggctg tcggggtggg gctgagctgc cagggagggg
     3241 tggttggggg gagggtgtgc aagtaggggt gggggagggg ggagtggaaa caaaactgta
     3301 catttttttt aaagtttgtt gaaaaaaata ttgtcttatt ctataaaaca tttcaaacct
     3361 agttaggtta tttgtaatca aaaaaaccgt ttgcacagaa agcagcactt agagctgcct
     3421 attctgtacc ctgcagctgg ataggaaaag aactaaaaat gacacctcca gcattctaag
     3481 acaggtggat tggtagccca gtaagggaga gtgttgtggg gagaagggga acagcatgag
     3541 ggaatctgct agcagttagg agcggaaaca gaggagacag gagcaggggc agagggggtg
     3601 cctgtgaaca gggcagtgga aataaacaat tggctgttat gaatcacttg caccaactaa
     3661 ccgtttgtat tttctttacc aacctttcct tcttgggcta ttgaggtaat agattgtcca
     3721 cttatattgt gcctttgtgc tgtctgccta aggcacagag actgctagtt gggtggttct
     3781 agtatatagg attcccaggc caagggggaa cgggggctct tggggactgc agagcataat
     3841 actttgtccc tatctatatt atattcagta aattcctata aagtctggag gagggtggga
     3901 acacagccct tagtctgaag atggtgattt gccagtccct agtctctgtc ttcctagttg
     3961 atagaggcaa gagatctctg gaatcattta ctaatattgc ctgcctctta caagtgtgag
     4021 ggaaggaatg attctcaggg tttcagctca cagaaacgca gcaagacttt tgtttactgc
     4081 gtcaagatat gtatataggt gaatcctgtg gtgtgggctg tcaggcccag gtgctgagaa
     4141 ttgcaactat tttatacaat gtagggggct ctgccctgct gctgtttttt gtttttgttt
     4201 ttgttttgat acacaggtag agagtagaaa ggggttgtgg ggttaggagg cagctcagtt
     4261 gggctgcaga aacttggaaa gactatgtga atgtgtgtat gggtgtgtgc aaggaaacac
     4321 cttttcccaa cttgttgaaa caggattcct tcaagggtgc ttcccttcaa gtcctcagag
     4381 aggcctctta tcaagagact tcatttggga tcatatagtt tgtaacttta acaacaccct
     4441 cccagttctt gacagaatag ctacaggttg ctgggttcaa gaatgtgagc aggatatagc
     4501 aatgcgcttt caatattgat cttcaattta aatcatcatc ttgcttagct aaaagcttac
     4561 tcagcaacag catcctacaa cacttcctgg tgagaaaatc tctgggctga gttactagga
     4621 catacttcac ttccacttcc ttgcctgagc agttctcttg tttaaacttg tgctgagatt
     4681 tgaatcttcc ctgtcctgat gtccttccca cgcaggcaag gcttctcagg gtgtgcagac
     4741 ctcattctga gtcctggttt gttaggacac accgttctgc tcaaggacct ctttccaagg
     4801 ctgcagtggg cctgggagga gagaagcgtg ctcatactgt gtcttttcta ttgcacttgt
     4861 ccctatggtg ccacagatgg gtttgtgtgt ggcagtgggt ggaatgattg catgcatctt
     4921 ttgtaactcg ctggtattag aaagggagtt caagaaagca ttgtttataa tgtcagggca
     4981 ggaagataga aactggagcc caaagaaatc cccttagaag aagattatgt tagaatagga
     5041 aacttaattt ccagaggcag aagctgtccc ttcagatgtt tagtcctcca acaaataata
     5101 ctttgacggt actctgtgat ctggatttta ggtggtagag ccctcaaaag tgcaaaaact
     5161 taacactgaa gtttgaggca acatgggtca gagagtatac tcgctgttga ttttcaacac
     5221 cagaaaagtc aaagtccttt tttttaaaaa aagctgtttt tctagtggaa tggagaatga
     5281 cactgccaca tccttgttgg gtctgttcag gaggtctcct gcatcaaagt ggacgtctgc
     5341 attttgtttc tgtcttgtgt ttttattatg aaaagaaatg ttattgggac gggtgtgggg
     5401 tgtagattat ggtaataaga ggaatccctg gttttgtttt ccttaaaaga gttgtttagt
     5461 gttttatcag atgtctgttg tagttgtaga tggaaaagct tgtaaacaaa caaacaccac
     5521 atggagcctg taaatgtttt tgcacaacct gtaaagcatt cttggaagtg gccagtaaaa
     5581 aaacggggga ggggggttcc atttttaaaa atgtaactgt gtcattgttt acatatgtaa
     5641 ctcttaccct gttctcatta caccattctg gcaaaaaatg tagacacagt agttccagtt
     5701 ttagaataaa taaccatttg gattga
//
