LOCUS       NM_053263               5176 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrnpa3),
            transcript variant c, mRNA.
ACCESSION   NM_053263
VERSION     NM_053263.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5176)
  AUTHORS   Ou,M.Y., Ju,X.C., Cai,Y.J., Sun,X.Y., Wang,J.F., Fu,X.Q., Sun,Q.
            and Luo,Z.G.
  TITLE     Heterogeneous nuclear ribonucleoprotein A3 controls mitotic
            progression of neural progenitors via interaction with cohesin
  JOURNAL   Development 147 (10) (2020)
   PUBMED   32321712
  REMARK    GeneRIF: Heterogeneous nuclear ribonucleoprotein A3 controls
            mitotic progression of neural progenitors via interaction with
            cohesin.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5176)
  AUTHORS   Papadopoulou,C., Boukakis,G., Ganou,V., Patrinou-Georgoula,M. and
            Guialis,A.
  TITLE     Expression profile and interactions of hnRNP A3 within hnRNP/mRNP
            complexes in mammals
  JOURNAL   Arch Biochem Biophys 523 (2), 151-160 (2012)
   PUBMED   22546510
  REMARK    GeneRIF: characterization of hnRNP A3 in human and mouse cell lines
REFERENCE   3  (bases 1 to 5176)
  AUTHORS   Hamada,T., Kurachi,S. and Kurachi,K.
  TITLE     Heterogeneous nuclear ribonucleoprotein A3 is the liver nuclear
            protein binding to age related increase element RNA of the factor
            IX gene
  JOURNAL   PLoS One 5 (9), e12971 (2010)
   PUBMED   20885981
  REMARK    GeneRIF: hnRNP A3 is a major liver nuclear protein binding to age
            related increase element of the factor IX gene.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 5176)
  AUTHORS   Tanaka,E., Fukuda,H., Nakashima,K., Tsuchiya,N., Seimiya,H. and
            Nakagama,H.
  TITLE     HnRNP A3 binds to and protects mammalian telomeric repeats in vitro
  JOURNAL   Biochem Biophys Res Commun 358 (2), 608-614 (2007)
   PUBMED   17502110
REFERENCE   5  (bases 1 to 5176)
  AUTHORS   Munton,R.P., Tweedie-Cullen,R., Livingstone-Zatchej,M.,
            Weinandy,F., Waidelich,M., Longo,D., Gehrig,P., Potthast,F.,
            Rutishauser,D., Gerrits,B., Panse,C., Schlapbach,R. and Mansuy,I.M.
  TITLE     Qualitative and quantitative analyses of protein phosphorylation in
            naive and stimulated mouse synaptosomal preparations
  JOURNAL   Mol Cell Proteomics 6 (2), 283-293 (2007)
   PUBMED   17114649
REFERENCE   6  (bases 1 to 5176)
  AUTHORS   McKee,A.E., Minet,E., Stern,C., Riahi,S., Stiles,C.D. and
            Silver,P.A.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
REFERENCE   7  (bases 1 to 5176)
  AUTHORS   Makeyev,A.V., Kim,C.B., Ruddle,F.H., Enkhmandakh,B.,
            Erdenechimeg,L. and Bayarsaihan,D.
  TITLE     HnRNP A3 genes and pseudogenes in the vertebrate genomes
  JOURNAL   J Exp Zool A Comp Exp Biol 303 (4), 259-271 (2005)
   PUBMED   15776420
REFERENCE   8  (bases 1 to 5176)
  AUTHORS   Mattar,P., Britz,O., Johannes,C., Nieto,M., Ma,L., Rebeyka,A.,
            Klenin,N., Polleux,F., Guillemot,F. and Schuurmans,C.
  TITLE     A screen for downstream effectors of Neurogenin2 in the embryonic
            neocortex
  JOURNAL   Dev Biol 273 (2), 373-389 (2004)
   PUBMED   15328020
REFERENCE   9  (bases 1 to 5176)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ048391.1, CJ048901.1, AF463524.1, AB201711.1, BC085474.1,
            AK011930.1, AK076236.1 and BC038364.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC157919.1, AF463524.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-12                CJ048391.1         2-13
            13-22               CJ048901.1         12-21
            23-1209             AF463524.1         1-1187
            1210-1590           AB201711.1         1256-1636
            1591-1872           BC085474.1         1531-1812
            1873-2979           AK011930.1         249-1355
            2980-5151           AK076236.1         896-3067
            5152-5176           BC038364.1         2597-2621
FEATURES             Location/Qualifiers
     source          1..5176
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 44.75 cM"
     gene            1..5176
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /note="heterogeneous nuclear ribonucleoprotein A3"
                     /db_xref="GeneID:229279"
                     /db_xref="MGI:MGI:1917171"
     exon            1..65
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..1133
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /note="isoform c is encoded by transcript variant c; hnRNP
                     A3"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein A3
                     isoform c"
                     /protein_id="NP_444493.1"
                     /db_xref="CCDS:CCDS50610.1"
                     /db_xref="GeneID:229279"
                     /db_xref="MGI:MGI:1917171"
                     /translation="MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVV
                     MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLT
                     VKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK
                     IVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRG
                     GNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGN
                     QGGGYGGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRS
                     SGSPYGGGYGSGGGSGGYGSRRF"
     exon            66..188
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            189..335
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            336..546
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            547..636
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            637..732
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            733..813
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            814..957
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1080
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            1081..1148
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     exon            1149..5158
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2232..2237
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /note="hexamer: AATAAA"
     polyA_site      2256
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
     regulatory      5136..5141
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /note="hexamer: ATTAAA"
     polyA_site      5158
                     /gene="Hnrnpa3"
                     /gene_synonym="2410013L13Rik; 2610209F03Rik;
                     2610510D13Rik; Hnrpa3"
                     /note="major polyA site"
ORIGIN      
        1 gcctcttcct ctcggtccca tattgaactc gagttggaag aggcgagtcc ggtctcaaaa
       61 tggagggcca tgatccaaag gaaccagagc agctgaggaa gctatttatt ggtggtctga
      121 gctttgaaac cacagatgat agcttaagag aacattttga gaaatggggc acacttacag
      181 actgtgtggt aatgagagat ccccaaacaa aacgttccag aggctttggt tttgtgacct
      241 actcttgtgt tgaagaggtg gatgctgcaa tgtgtgctcg gccacacaag gttgatgggc
      301 gtgtggtgga accgaagaga gctgtttcta gagaggattc tgtaaagcct ggtgcccatt
      361 taacggtgaa gaaaattttt gttggtggta ttaaagagga tacggaagaa tataacctga
      421 gagactactt tgaaaagtat ggcaagattg aaaccataga ggttatggaa gacaggcaga
      481 gtgggaaaaa gagaggattt gcttttgtaa cttttgatga tcatgacaca gttgataaaa
      541 ttgttgttca gaaataccac actattaatg ggcataattg tgaagtgaaa aaggcccttt
      601 ctaaacaaga gatgcagtct gctggatcac agagaggtcg tggaggtgga tctggcaact
      661 ttatgggtcg tggaggaaac tttggaggtg gtggaggaaa ctttggtcgt ggaggaaact
      721 ttggtggaag aggtggctat ggtggtggag gtggtggcag cagaggtagt tatggaggtg
      781 gtgatggtgg atataatgga tttggaggtg atggtggcaa ctatggtggt ggtcctggtt
      841 acagcagtag aggaggttat ggaggtggtg gaccaggata tggaaaccag ggtggtggat
      901 atggtggtgg aggaggaggc tatgatggtt acaatgaagg aggaaatttt ggtggaggta
      961 actatggtgg tggtggaaac tataatgact ttggaaatta tagtggacag caacaatcaa
     1021 attatggacc catgaagggg ggcagttttg gtggaagaag ctcaggcagt ccctatggtg
     1081 gtggctatgg atctggaggt ggaagtggtg gatatggtag cagaaggttt taaaataaaa
     1141 cagaaacggc tacagttctt agcaggagag agagcgagga gttgtcagga aagctgcagg
     1201 ttactttgag acagtcgtcc caaatgcatt agaggaactg taaaaatctg ccacagaagg
     1261 aacgatgatc catagtcaga aaagttactg cagcttaaac aggaaaccct tcttgttcag
     1321 gactgtcata gccacagttt gcaaaaagtg cagctattga ttaatgcaat gtagtgtcaa
     1381 ttagatgtac attcctgagg tcttttatct gttgtagctt tgtctttttc tttttctttt
     1441 cattacatca ggtatattgc cctgtaaatt gtggtagtgg taccaggaat aaaaaattaa
     1501 ggaattttta acttttcaat atttgtgtag ttcagttttt ctacatttta gtacagaaac
     1561 tttaacaaaa tgcagtttcg aaggtgtttc cttgtgagtt aacacgtgaa gaagatcatt
     1621 gttaattact attttgtatg aattttgcta aagttaactg taaagaaaca cctactgact
     1681 tgcaatttaa ggggaatcta ttctccccat ttccaaaaca atgatgaatg ggcgctgaca
     1741 tgtggagaga atagatattt gtatgtttgc aatgtgtgtt ttagataatt agaattggga
     1801 aataaaaaaa tagcatattt gtgaatttaa tagcattaag attaccttca aatgaaaaag
     1861 atctcaaaag ttgctgtttg gtttttgtgc attttctttc aaagtgtaat catgatttta
     1921 gtgtattaga tttattgagt cctagccatg ttaagaacat ctccattcca catttacctt
     1981 gatcccgttg aaactgctgc caatagttcg gggtacaaag tgttcatact gctctttact
     2041 caccaaggct ggtagatgta tgtcatctcc cagtttaaca ttactttccc atacagaccc
     2101 acaaagtctg ctgggtctga gcaaactggt gggtacctgg tttgcttttg cttataaagg
     2161 tctcaaggcc cattggtcta gtcattttcc ttggttaagt gtcccacaca cacagctttt
     2221 cagagcaaag gaataaaagt cactcattga aacccctgac tggctggcat gctttcctgt
     2281 ttatccattt tgctagatga tgaaacaaaa tgatagtaag gtgttgtcca aacaaagcag
     2341 cagaagatgt agcacacacg gttgctcagt gcaagcacct cacagcccca aatatctgaa
     2401 ctcaaattcg gaatgtctta aatccccaaa gaagaacaca tggttattct ttgtgtatat
     2461 atatatatat ctctcatttt aaaacgtcgg gtgtgacaat ttgtttggag accctgtttg
     2521 agaggagttt cagataaaag gtcatatata aaaattgtct actgttgcgc cagctagtgc
     2581 tgaacaattt cattcaaatc ctgagtatgt gccctgctgt tacttccttt ggcagttgac
     2641 cgttgaaatc agatttttac ttggttttta aagtataagc taaacaagca ataaaagggg
     2701 gaatggggcg tgctagtatt tcaatttgct ctcttgttgc tctacttctg tgcctctgtg
     2761 cattattaat atttggatgc atgcagtgct agcatggaac tttggtcttc acaattactg
     2821 cagtttttcc agaaaacact cacaccaata aatgtaacag aacattccat ttgttaatgg
     2881 gcatatgtgc ataagcagtg tagaaaatag gctcatgtta gaaactggct acatccttca
     2941 taactaaaag tgtggttata tgaatggaca ctgtcaatgt tcatagctta aacctgggta
     3001 cctggtcaaa atgcttagga aacattaaaa ttgagctaaa ttgtctcaag tccttttatt
     3061 catataataa agattgaagg gatggggggg aggctgacat tttctggttt tgtttgtgaa
     3121 attgctggac acaaccttga cagtatcctt taatgtaatg aggtcaattg tattgttaac
     3181 catcttttta tgtataatag tgaaaaattt acagtaagtt ggtgtttaca acctataatc
     3241 aggtaaaatc tgtatgtgac ctgtttataa gttgtactga gttagttttt gtgaactgtg
     3301 gaagagtaag ccatgagagc gatttaacca gctttaaagg acataagttg tgctttttaa
     3361 gcacggtgga tcaaaggaaa acccactaag acaggacttc agcagccatt tgagtatgga
     3421 caagtcagca taaataaaga atgagaaggc agcagcagca agagcttcaa caacagagaa
     3481 gtggaggcat aagatactat gatgctagtg agcaacttcc caaaagctag ttaaagctgc
     3541 ttattgcaac tgaaatgtcg aagaaagtag caggaaggag cttcgccttt tggaacatca
     3601 atgagctagt tgccacaggc gctaggtcta gcatttagac ctgcaaggaa gggcaataag
     3661 cattaggtaa ggcttgaatt tgaatttttt cactaattaa atgagtgctt tttttgtaaa
     3721 gcaaggtaag agtaatcttt ttgatttgca ggtgaatgag aaccctacct gcctaacgag
     3781 gaatgtcttt cccacacctt aaatacgaag gtttctggct gggtaaggtt tgtagctcac
     3841 agtaaaaacc gatgacactg ttggtttccc acaagtcaat gtcacagttg agacacccct
     3901 caagctcagt tttgttttgg tgcccattga acaaattcta agacataggc agttacattc
     3961 tgcaaagcca tgggtgtttg tcataagcta gatgtgcctc ttcatgtgta caactcaatg
     4021 ttctaaggta aagtcatcct tcaataaggg gaagtcatgt tggcttttca aaagtaagtt
     4081 tttcatgtat gactttaata agctgttccc accctaagaa ctaggaactt tcacagttgt
     4141 cagaataatt gtcttcctta aagctctata gcgtgtaagt ttactcttgt gtggaccagt
     4201 agggatagtc aagtgtttag tcttctcccc taacccatca caaacagggt ctcactgttg
     4261 tcctagcctg gaactcaatc caccagcctt ctgtgtctcc caagtgctgg agttaaaagg
     4321 gtggtgcctg tatgataact caagttcctt tttaaaaaaa catccaaaga acagttgggt
     4381 tactattcac ataatgttgc tggttgttca taagggctat ttctgctgcc ctgaaagggc
     4441 ttatttgaaa attgcttaat tcaggttact tcttaataga acattttcag gggacaaatc
     4501 tgcaaaatgt ttcccacaca gggaacatcc ctgcatcaac aagtttgctt ggcatttaag
     4561 tcaggacaaa gttcacagaa atcatagtta ccaatgaggt agcaatcgtt caatggtggt
     4621 taacagattg gagaaaatac atttgcttag gaggcattta cagtccattt cctttctgaa
     4681 ataaagttat tttactaata tggttccact gtcatttctg caaaaacact ttacaatggt
     4741 agaagggtaa gcataaaaca aaagaggctg cctctggttt tgttggacct gtgggatgct
     4801 gctcccagtt tacatgtctg aaaggtgtgt tcacattcgt gtataaatta ggggacacat
     4861 ggtaagaaaa agtccatcta gtaggggact acagagaaat gggctcggtt tttaagggtt
     4921 ctgttaatgt cacaatttga aacgctcctg acaatagttc agtaattggc atggtagcaa
     4981 gcatgcagat gtgcaaggtg ctgtgaggat tggtagcctg agtattcagt tttaaactta
     5041 acatgtcttc taatctttat gacagcagag gtggtctgta attcaattgt tttcatttgt
     5101 agcataatga aatgttacag aaagatgacc ttttcattaa aatattttta gaaatgtgaa
     5161 aaaaaaaaaa aaaaaa
//
