LOCUS       NM_029872               2678 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus heterogeneous nuclear ribonucleoprotein A0 (Hnrnpa0),
            mRNA.
ACCESSION   NM_029872 XM_001001311 XM_891442
VERSION     NM_029872.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ji,S., Yang,Z., Gozali,L., Kenney,T., Kocabas,A., Jinsook Park,C.
            and Hynes,M.
  TITLE     Distinct expression of select and transcriptome-wide isolated
            3'UTRs suggests critical roles in development and transition states
  JOURNAL   PLoS One 16 (5), e0250669 (2021)
   PUBMED   33951080
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   3  (bases 1 to 2678)
  AUTHORS   Young,D.J., Stoddart,A., Nakitandwe,J., Chen,S.C., Qian,Z.,
            Downing,J.R. and Le Beau,M.M.
  TITLE     Knockdown of Hnrnpa0, a del(5q) gene, alters myeloid cell fate in
            murine cells through regulation of AU-rich transcripts
  JOURNAL   Haematologica 99 (6), 1032-1040 (2014)
   PUBMED   24532040
  REMARK    GeneRIF: Knockdown of Hnrnpa0, a del(5q) gene, alters myeloid cell
            fate in murine cells through regulation of AU-rich transcripts.
REFERENCE   4  (bases 1 to 2678)
  AUTHORS   McKee,A.E., Minet,E., Stern,C., Riahi,S., Stiles,C.D. and
            Silver,P.A.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2678)
  AUTHORS   Rousseau,S., Morrice,N., Peggie,M., Campbell,D.G., Gaestel,M. and
            Cohen,P.
  TITLE     Inhibition of SAPK2a/p38 prevents hnRNP A0 phosphorylation by
            MAPKAP-K2 and its interaction with cytokine mRNAs
  JOURNAL   EMBO J 21 (23), 6505-6514 (2002)
   PUBMED   12456657
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC165251.2.
            
            On or before Apr 11, 2009 this sequence version replaced
            XM_001001311.2, XM_891442.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK019388.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2678              AC165251.2         6523-9200
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 30.95 cM"
     gene            1..2678
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
                     /note="heterogeneous nuclear ribonucleoprotein A0"
                     /db_xref="GeneID:77134"
                     /db_xref="MGI:MGI:1924384"
     exon            1..2678
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
                     /inference="alignment:Splign:2.1.0"
     CDS             244..1161
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein A0"
                     /protein_id="NP_084148.1"
                     /db_xref="CCDS:CCDS49280.1"
                     /db_xref="GeneID:77134"
                     /db_xref="MGI:MGI:1924384"
                     /translation="MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQT
                     KRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV
                     GGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKF
                     HPIQGHRVEVKKAVPKEDIHAGGGGARAARGGRGGGRGRGGGGGGGGRDQNGLAKGGG
                     GGGGGYNSYGGYGGYGAYGGGGGGGGSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGGG
                     GGGGGSWGGRSNSGPYRGGYGGGYGGGSF"
     regulatory      1621..1626
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
                     /note="hexamer: AATAAA"
     polyA_site      1644
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
                     /note="major polyA site"
     regulatory      2659..2664
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
                     /note="hexamer: AATAAA"
     polyA_site      2678
                     /gene="Hnrnpa0"
                     /gene_synonym="1110055B05Rik; 3010025E17Rik; hnRNP A0;
                     Hnrpa0"
ORIGIN      
        1 ctctttgtgt ggtgtcccga taggggagcg gaggtggcgg ccgcggcggc cccggtcggg
       61 ttccagcgtc ctcggctcgc cctcgggccg gcagcgcgcc ccttccctcc ccctcccgcc
      121 ccttccccgc cggcggtggc ggcggcggcc gggcccgggc tcggacgagg cctcggcgac
      181 cgctaacggg cgacggcgac gcggcggagc gcgcagggcg ggggcagggc ccgggcggcc
      241 gacatggaga actcgcagct ctgtaagctg ttcatcggcg gcctcaatgt gcagacgagt
      301 gagtcggggc tgcgcggcca cttcgaggcc ttcgggacgc tgacggactg cgtggtggtg
      361 gtgaaccccc agacgaagcg ctcccgctgc ttcggcttcg tgacctactc gaacgtggag
      421 gaggcggatg ccgccatggc cgcgtcgccg cacgcggtgg acggcaacac ggtggagctg
      481 aagcgcgccg tgtcgcggga ggattcggcg cggcccgggg cgcacgccaa ggtgaagaag
      541 ctgttcgtgg gcggcctcaa gggcgacgtg gcggagggcg acctgatcga gcacttctcg
      601 cagttcggcg cggtggagaa ggcggagatc attgccgaca agcagtcggg caagaagcgc
      661 ggcttcggct tcgtctactt ccagagccac gacgcggccg acaaggccgc ggtggtcaag
      721 ttccacccga tccagggcca ccgcgtggag gtgaagaagg cggtgcccaa ggaggatatc
      781 cacgcgggcg gcgggggtgc gcgggcggcc cggggcgggc gcggcggagg ccggggccgc
      841 ggcggcggag gcggcggcgg cggccgagac cagaacgggc tggccaaggg cggcggtggc
      901 ggcggcggcg gctacaacag ctacggcggc tacgggggct acggcgccta cgggggcggt
      961 ggcggcggcg gcggctcata cggcggcagc gactacggca acggcttcgg cggcttcggc
     1021 agctacagcc agcaccagtc ctcgtacggg ccgatgaaga gcggcggagg cggcggcggc
     1081 ggcggcagct ggggcggccg cagcaacagt ggaccgtaca gaggcggcta cggcggcggc
     1141 tacggcggag gctcgttcta gaagccgggt tccggatgcc ggcggcgggc gcggccatcg
     1201 tcgccctccg cgcccgcccc aggtgccctc gggggaagcc gctcaccctg gggggcacga
     1261 caccccccgc ttgcctgccc gttacccccc ctgaaggtgg actcggcccc acacacacac
     1321 atttttgtgt tacagtcatt gatggactct atttttttat tattacttgg accttggtcg
     1381 tttttatact agcaaaaaaa tgtcttgttt taatttgtgt tttttggggg ggcgggtggg
     1441 cgggcgggag tgaacttgct gattctgtag caacacctgg gtgggggttg ggcgggaggg
     1501 tagtttactt tgttgtaagg acttgatacc tggctacagc gttttctatg aaacctactt
     1561 ggatcccatg cctggaattt ggaagcatat gtacaaaaat catttttacg ttttattttt
     1621 aataaatcat tgtgtttgac cgtacatgtc taacattttt tttttcctag gatccactcc
     1681 ttaccgtttt aaaggatatt tttgttaggt tttgatgtgt acttcgagac gcttaaagga
     1741 ggtcttgtgg gctctttttt tttttttttc cccttcctgt ttgcccagtt agtgatgttg
     1801 aatttacctt ttacagacaa aatctttctg aagtggtgga tgtggctgtt tagtcctgtg
     1861 catccatctc tttgtaataa gcgatttgct tatcatcttg acatggttgg ttctttctat
     1921 gagaatttac ttcaaaacat gtactgtgta gtttaaaaaa aatagtttgt gtttaaagca
     1981 tgtgttctca ttcatataaa ctgtttaaaa cttttttagg tgacctagtt tcttccttat
     2041 tggtttgtct gtaatgaatg gttacaaata agggttctat tttaccctaa cactaaatga
     2101 gtttttttta aatgtatttt cagagcaggt ttaaaaaaag cgtttcttcc ctaagtctga
     2161 actttgtcct cttttaagtc caacggatgt agcaccatct gctggtagag tggcagtata
     2221 gctgcaagac ggttggttaa gaaaaaccca acttacttgt tcaggacaat ttcatcagat
     2281 ttagcagttt gccatcagaa ttctgcagac ttgaaaggtc cacatttact tgtagctgag
     2341 acgggcttcc cgggagtgta gttaacagcc cgcatcagtc actttttcta cgtgagattt
     2401 gaacatgtaa actgctatgc atagcttggg cagtagcccc aaactgctcc ggtagctact
     2461 gaagcagctg tgtgtactgg ggttttaggt gcaagttgta aaacaaaata tctgtattct
     2521 gcttggttaa cgtgtatttg tagcccttca tgcaatagaa ttcaagttgt tgtttataaa
     2581 aaaaaaacaa aaactgataa tagaagaaaa tgccttcctg gatagaaaca tagaatagca
     2641 acgtttatgg atatcacaaa taaagaattc aattctta
//
