LOCUS       XM_006532279            3877 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus hyaluronan mediated motility receptor
            (RHAMM) (Hmmr), transcript variant X4, mRNA.
ACCESSION   XM_006532279
VERSION     XM_006532279.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006532279.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3877
                     /gene="Hmmr"
                     /gene_synonym="AA386826; CD168; Rhamm"
                     /note="hyaluronan mediated motility receptor (RHAMM);
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 13 ESTs, 254 long SRA reads, 1
                     Protein, and 85% coverage of the annotated genomic feature
                     by RNAseq alignments, including 17 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:15366"
                     /db_xref="MGI:MGI:104667"
     CDS             664..2433
                     /gene="Hmmr"
                     /gene_synonym="AA386826; CD168; Rhamm"
                     /codon_start=1
                     /product="hyaluronan mediated motility receptor isoform
                     X4"
                     /protein_id="XP_006532342.1"
                     /db_xref="GeneID:15366"
                     /db_xref="MGI:MGI:104667"
                     /translation="MMVKQEGMELKLQATQKDLTESKGKIVQLEGKLVSIEKEKIDEK
                     CETEKLLEYIQEISCASDQVEKCKVDIAQLEEDLKEKDREILSLKQSLEENITFSKQI
                     EDLTVKCQLLETERDNLVSKDRERAETLSAEMQILTERLALERQEYEKLQQKELQSQS
                     LLQQEKELSARLQQQLCSFQEEMTSEKNVFKEELKLALAELDAVQQKEEQSERLVKQL
                     EEETKSTAEQLTRLDNLLREKEVELEKHIAAHAQAILIAQEKYNDTAQSLRDVTAQLE
                     SVQEKYNDTAQSLRDVTAQLESEQEKYNDTAQSLRDVTAQLESEQEKYNDTAQSLRDV
                     TAQLESYKSSTLKEIEDLKLENLTLQEKVAMAEKSVEDVQQQILTAESTNQEYARMVQ
                     DLQNRSTLKEEEIKEITSSFLEKITDLKNQLRQQDEDFRKQLEEKGKRTAEKENVMTE
                     LTMEINKWRLLYEELYEKTKPFQQQLDAFEAEKQALLNEHGATQEQLNKIRDSYAQLL
                     GHQNLKQKIKHVVKLKDENSQLKSEVSKLRSQLVKRKQNELRLQGELDKALGIRHFDP
                     SKAFCHASKENFTPLKEGNPNCC"
ORIGIN      
        1 gctgaggggg aaagttgagg taaatttgaa ttcaggcgag ctgacagttt gctggggcgt
       61 ttgattgctg tctcatctgg acccaggcgt cagaatgtcc tttcctaagg cgcccctgaa
      121 gagattcaat gacccttcgg gttgtgctcc atctccgggt gcttatgatg ttaaaacttc
      181 agaagcaact aaaggaccag tgtcttttca gaaatcacaa agatttaaaa accaaagaga
      241 gtctcaacaa aatcttaaca ttgacaaaga tacaaccttg cttgcttcgg ctaaaaaagc
      301 aaagaagtct gtgtcaaaga aggactctca gaagaatgat aaagatgtga agagattaga
      361 aaaagagatt cgcgctcttt tgcaagagcg agggactcag gacaaacgga tccaggacat
      421 ggaatctgaa ttggagaaga cagaagcaaa gctcaatgca gcagtcagag agaaaacatc
      481 tctctctgcg agtaatgctt cactggaaaa acggcttact gaattaacca gagccaacga
      541 gctactaaag gctaagtttt ctgaagatgg tcaccaaaag aatatgagag ctctaagcct
      601 ggaattgatg aaactcagaa ataagagaga gacaaagatg aggttctctg tgttgtgcag
      661 agtatgatgg tcaaacagga aggcatggag ctgaagctgc aggccactca gaaggacctc
      721 acggagtcta agggaaaaat agtccagctg gagggaaagc ttgtttcaat agagaaagaa
      781 aagatcgatg aaaaatgtga aacagaaaaa ctcttagaat acatccaaga aattagctgt
      841 gcatctgatc aagtggaaaa atgcaaagta gatattgccc agttagaaga agatttgaaa
      901 gagaaggatc gtgagatttt aagtcttaag cagtctcttg aggaaaacat tacattttct
      961 aagcaaatag aagacctgac tgttaaatgc cagctacttg aaacagaaag agacaacctt
     1021 gtcagcaagg atagagaaag ggctgaaact ctcagtgctg agatgcagat cctgacagag
     1081 aggctggctc tggaaaggca agaatatgaa aagctgcaac aaaaagaatt gcaaagccag
     1141 tcacttctgc agcaagagaa ggaactgtct gctcgtctgc agcagcagct ctgctctttc
     1201 caagaggaaa tgacttctga gaagaacgtc tttaaagaag agctaaagct cgccctggct
     1261 gagttggatg cggtccagca gaaggaggag cagagtgaaa ggctggttaa acagctggaa
     1321 gaggaaacga agtcaactgc agaacaactg acgcggctgg acaacctgct gagagagaaa
     1381 gaagttgaac tggagaaaca tattgctgct cacgcccaag ccatcttgat tgcacaagag
     1441 aagtataatg acacagcaca gagtctgagg gacgtcactg ctcagttgga aagtgtgcaa
     1501 gagaagtata atgacacagc acagagtctg agggacgtca ctgctcagtt ggaaagtgag
     1561 caagagaagt acaatgacac agcacagagt ctgagggacg tcactgctca gttggaaagt
     1621 gagcaagaga agtacaatga cacagcacag agtctgaggg acgtcactgc tcagttggaa
     1681 agctataagt catcaacact taaagaaata gaagatctta aactggagaa tttgactcta
     1741 caagaaaaag tagctatggc tgaaaaaagt gtagaagatg ttcaacagca gatattgaca
     1801 gctgagagca caaatcaaga atatgcaagg atggttcaag atttgcagaa cagatcaacc
     1861 ttaaaagaag aagaaattaa agaaatcaca tcttcatttc ttgagaaaat aactgatttg
     1921 aaaaatcaac tcagacaaca agatgaagac tttaggaagc agctggaaga gaaaggaaaa
     1981 agaacagcag agaaagaaaa tgtaatgaca gaattaacca tggaaattaa taaatggcgt
     2041 ctcctatatg aagaactata tgaaaaaact aaaccttttc agcaacaact ggatgccttt
     2101 gaagccgaga aacaggcatt gttgaatgaa catggtgcaa ctcaggagca gctaaataaa
     2161 atcagagact cctatgcaca gctacttggt caccagaacc taaagcaaaa aatcaaacat
     2221 gttgtgaaat tgaaagatga aaatagccaa ctcaaatcgg aggtgtcaaa actccgatct
     2281 cagcttgtta aaaggaaaca aaatgagctc agacttcagg gagaattaga taaagctctg
     2341 ggcatcagac actttgaccc ttccaaggct ttttgtcatg catctaagga gaattttact
     2401 ccattaaaag aaggcaaccc aaactgctgc tgagttcaga tgcaacttca agaatcatgg
     2461 aagtatacgt ctgaaatact tgttgaagat tattttcttc attgttcttg atattatgtt
     2521 tatagtatat attatataat gtatttaatt tctactgcct agtcttaggt atatgaaacg
     2581 gtaattcagc atttgttctc tgtcttagtc agggtttctg ttcctgcata aacatcagac
     2641 caagaaacaa gctggggagg aaagggttta ttcagcttac acttccatac tgctgttcat
     2701 caccaaagga agtcaggact ggaactcaag caggtcagga agtaggagct gatgcagagg
     2761 ccatggaggg acattcctta ctggcttgct tcccctggct tgctcagctt gctttcttac
     2821 agaacccaag tctaccagcc tagagacagc accaaccaca aggggccctc ccacccttga
     2881 tcaataattg agaaaaatgc cttacagttg gatctcatga aggcattttc tcacctgaag
     2941 ctcctttctc tgtgataact ccaggtggtg tcaagttgac acacaaacac attactatta
     3001 agcctcaacc cttactttct tattaatccc catgatcaaa ataactttaa aagtcccaca
     3061 gtctttgaaa attcttaaaa tttcaatccc tttaaaatat ccaatctctt ttaaaattca
     3121 aagtcttttt acaattaaaa agtctcttaa ctgtggtctc cactaaaata ctttcttcct
     3181 tcaagaggga aaaatatcag ggcacagtca caaacaatta aaagcaaaat caaactacaa
     3241 cctcaaacgt ctgggaccct ccaagggctt gggtcacttc tctagctctg ccctttgtag
     3301 cacacaactt gtcttctagg ctccagatgc ctgtactcca ctgctgctgc tgttcttggt
     3361 agtcatttat ggtactggca tctccaaaac actgttgtct ttgctgtaac taggcttcac
     3421 caatagcctc tcataggctc tcttcatggt gccaagcctc aaatcctttg catgacccct
     3481 tcagtcctgg gccatcaact gctactgagg ctgcaccttt accagtggcc ttccatggcc
     3541 tctcacatgc caagcctcag ctgctcttta tgtcttcaaa accagtatga ctcttaaaca
     3601 taaccaagtc cagctgcagc taaggtagaa ccttgtctat ctctggaaca cagcctcttt
     3661 gtgctctcag aaaacacttc cctcctatga ctaggcaggc cttttactca gatctccttg
     3721 cttatgtctc ccaattacta ggatttaagg caagcatcac atggccaggc tctcaagcaa
     3781 atctgaaaaa ctttacatgt atgattttta gagaatttat catctgcata tcctctgaat
     3841 gtgtgtgtaa tataaaataa agtaatataa aaactca
//
