LOCUS       NM_001002900             506 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus HIG1 domain family, member 1C (Higd1c), mRNA.
ACCESSION   NM_001002900 XM_354884
VERSION     NM_001002900.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Timon-Gomez,A., Scharr,A.L., Wong,N.Y., Ni,E., Roy,A., Liu,M.,
            Chau,J., Lampert,J.L., Hireed,H., Kim,N.S., Jan,M., Gupta,A.R.,
            Day,R.W., Gardner,J.M., Wilson,R.J.A., Barrientos,A. and Chang,A.J.
  TITLE     Tissue-specific mitochondrial HIGD1C promotes oxygen sensitivity in
            carotid body chemoreceptors
  JOURNAL   Elife 11, e78915 (2022)
   PUBMED   36255054
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Weiss,A.C., Bohnenpoll,T., Kurz,J., Blank,P., Airik,R.,
            Ludtke,T.H., Kleppa,M.J., Deuper,L., Kaiser,M., Mamo,T.M.,
            Costa,R., von Hahn,T., Trowe,M.O. and Kispert,A.
  TITLE     Delayed onset of smooth muscle cell differentiation leads to
            hydroureter formation in mice with conditional loss of the zinc
            finger transcription factor gene Gata2 in the ureteric mesenchyme
  JOURNAL   J Pathol 248 (4), 452-463 (2019)
   PUBMED   30916783
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB099517.1.
            
            On Aug 30, 2004 this sequence version replaced XM_354884.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB099517.1, AI430480.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 56.28 cM"
     gene            1..506
                     /gene="Higd1c"
                     /gene_synonym="Gm921; HIG1-4; Yghl1-4"
                     /note="HIG1 domain family, member 1C"
                     /db_xref="GeneID:380975"
                     /db_xref="MGI:MGI:2685767"
     exon            1..45
                     /gene="Higd1c"
                     /gene_synonym="Gm921; HIG1-4; Yghl1-4"
                     /inference="alignment:Splign:2.1.0"
     exon            46..142
                     /gene="Higd1c"
                     /gene_synonym="Gm921; HIG1-4; Yghl1-4"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..342
                     /gene="Higd1c"
                     /gene_synonym="Gm921; HIG1-4; Yghl1-4"
                     /note="YGHL1 homolog"
                     /codon_start=1
                     /product="HIG1 domain family member 1C"
                     /protein_id="NP_001002900.1"
                     /db_xref="CCDS:CCDS37210.1"
                     /db_xref="GeneID:380975"
                     /db_xref="MGI:MGI:2685767"
                     /translation="MSSDEWSAAEDEGQLSRLLRKSRDSPFVPVGMAGFVAVLSYGLY
                     KLNSRREQKMSLHLIHVRVAAQGCVVGAVTLGVLYSMYKDYIRPRFFNVPKK"
     exon            143..277
                     /gene="Higd1c"
                     /gene_synonym="Gm921; HIG1-4; Yghl1-4"
                     /inference="alignment:Splign:2.1.0"
     exon            278..506
                     /gene="Higd1c"
                     /gene_synonym="Gm921; HIG1-4; Yghl1-4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagacaggc agcaagcact gggatactgt tccagcacgt acaagagaga aatgtcttca
       61 gatgagtggt cagcagctga ggatgaaggc cagctgtccc gactcctccg gaaatcgaga
      121 gactccccct ttgtccccgt gggcatggca ggctttgtgg ctgtgctgtc ctacggtctt
      181 tacaagctaa attccagaag agagcagaag atgtcccttc atctcatcca cgtgcgggtt
      241 gccgcccaag gatgtgtggt gggagccgtg actctaggtg ttctctactc tatgtataag
      301 gactatatca gacctcggtt cttcaatgta cccaaaaagt aaagccagaa gctggaagca
      361 aggacggccg gctccttcag tgctagcatc agaaaaagga attctcattg tgttctgaat
      421 catgctacaa cgtgtaactc acacagaatc ctcatagaat ctgtatctca cgatgctaag
      481 cggttgctct ctaaatcctc tcggtt
//
