LOCUS       XM_006532274            2958 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus HGF-regulated tyrosine kinase substrate
            (Hgs), transcript variant X5, mRNA.
ACCESSION   XM_006532274
VERSION     XM_006532274.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006532274.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2958
                     /gene="Hgs"
                     /gene_synonym="Hgr; Hrs; tn; ZFYVE8"
                     /note="HGF-regulated tyrosine kinase substrate; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 mRNAs, 139 ESTs, 652 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 48 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:15239"
                     /db_xref="MGI:MGI:104681"
     CDS             123..2474
                     /gene="Hgs"
                     /gene_synonym="Hgr; Hrs; tn; ZFYVE8"
                     /codon_start=1
                     /product="hepatocyte growth factor-regulated tyrosine
                     kinase substrate isoform X5"
                     /protein_id="XP_006532337.2"
                     /db_xref="GeneID:15239"
                     /db_xref="MGI:MGI:104681"
                     /translation="MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKY
                     AVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEV
                     NVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDW
                     VDAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQ
                     LNKKAEGKASSTTELPPEYLTSPLSQQSQLPPKRDETALQEEEELQLALALSQSEAEE
                     KERMRQKTTYTAHPKAEPTPLASSAPPAGSLYSSPVTQCLSPQNSSAPLAEDIDPELA
                     RYLNRNYWEKKQEEARKSPTPSAPVPLTEPAAQPGEGHTAPNSMAEAPLPETDSQPIT
                     PCSGPFSEQYQNGESEESHEQFLKALQNAVSTFVNRMKSNHMRGRSITNDSAVLSLFQ
                     SINTMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALSALREEHREKLRRAAEEA
                     ERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQEKERQMRLEQQKQTVQMRAQM
                     PAFPLPYAQLQAMPTAGGVLYQPSGPTSFPATFSPAGSVEGSPMHGVYMSQPAPATGP
                     YPSMPGTTADPSMVSAYMYPTGAPGAQAAPQAQAGPTTSPAYSSYQPTPTPGYQSVAS
                     QAPQSLPAISQPPQTSNIGYMGSQPMSMGYQPYNMQNLMTALPGQDASLPAQQPYIPG
                     QQPLYQQMAPSTGPPQQQPPVAQPAPTQGPPAQGSEAQLISFD"
ORIGIN      
        1 cggggcggcg cggaggcgtt gcgcgtgcgc gagcagaaaa agaaaggcgg aagcggaagt
       61 tggggggcgc gtcagctccg aaagagggag cgactgcagc gtcggtccgg agtggggtcg
      121 ccatggggcg aggcagcggc accttcgagc gtctcctaga caaagccacc agccagcttc
      181 tgttggagac agactgggag tccattctac agatctgcga cctgatccgt cagggggaca
      241 cacaagcaaa atatgctgta aactccatca agaagaaggt taatgataag aacccacacg
      301 tggctttgta tgctctggag gtgatggagt ctgtggtaaa gaactgtggc cagacagtcc
      361 atgatgaagt ggccaacaaa cagaccatgg aagaactgaa ggagctgctg aagaggcaag
      421 tggaagttaa tgttcggaac aagatcttgt acctgatcca ggcctgggca catgccttcc
      481 ggaacgaacc caagtacaag gtggtccagg acacatacca gatcatgaag gtagaaggac
      541 atgtcttccc tgaatttaag gaaagtgatg ccatgttcgc tgctgaaaga gcccctgact
      601 gggtggatgc tgaggaatgc catcggtgca gagtacagtt tggggtggtg acccgcaagc
      661 atcactgccg agcatgtggg cagatcttct gtggcaagtg ctcctccaag tactccacca
      721 tccccaagtt cggcattgag aaggaggtgc gcgtgtgtga gccctgctat gagcagctga
      781 acaagaaggc agaagggaag gcttcctcta ccactgagct gcccccagag tacctgacca
      841 gccccctgtc acagcagtct cagctgcccc caaagcggga tgagacagcc ctgcaggaag
      901 aggaggagct acagctggct ctggccctat cacagtcaga ggctgaggag aaagagagga
      961 tgagacagaa aacaacatat acagcacatc caaaggcaga gcccacgccc ttggcttcct
     1021 ctgcgccccc agctggcagc ctgtattcct cgcctgtgac tcaatgcttg tctccccaga
     1081 actcatcagc acctctggct gaggacatcg accctgagct tgcaagatac ctcaaccgga
     1141 actactggga gaagaaacag gaggaagcac ggaagagccc cacaccatct gcacctgtgc
     1201 ccctgacaga gcctgctgcc cagcctggag aaggacatac agcccccaac agcatggcag
     1261 aggctcctct tccagagaca gactctcagc ccataactcc ctgcagcggc ccctttagtg
     1321 agcagtacca gaatggggag tcggaggaga gccatgagca gttcctcaag gccctgcaga
     1381 atgccgtgag cacttttgtc aaccgcatga agagcaacca catgcgggga cgcagcatca
     1441 ccaacgactc ggctgtgctg tcactcttcc agtccatcaa caccatgcac ccgcagctgc
     1501 tcgagctgct caaccagctg gatgagcgca ggctgtacta cgagggcctt caggacaagc
     1561 tggcacagat acgtgacgcc cgaggggctc tgagcgccct gcgtgaagaa cacagggaga
     1621 agctgcgccg ggcagctgag gaggctgagc gtcaacgcca gatccagctg gcacagaaac
     1681 tggagatcat gagacagaag aagcaggagt acctggaggt gcagagacag ctagctatcc
     1741 agcgcctgca ggaacaggag aaggaacggc agatgcgtct ggagcaacag aagcagactg
     1801 tccagatgcg cgcccagatg cctgcctttc ccttgcctta tgcccagctc caggctatgc
     1861 ccacggctgg gggtgtactc taccagccct caggcccaac cagcttccct gccaccttca
     1921 gcccagcagg ctcagtagag ggctctccga tgcatggtgt gtatatgagc cagccagccc
     1981 cagccactgg cccctacccc agcatgcctg gcacaacagc agatcccagc atggtcagcg
     2041 cctacatgta cccaacaggt gcccctgggg cacaggcagc ccctcaggcc caggccgggc
     2101 ccaccaccag tcctgcctac tcctcctacc agcccacacc aaccccaggc taccagagcg
     2161 tggcttctca ggccccacag agcctcccag ccatctcaca gcctccacag accagcaaca
     2221 taggctacat ggggagccag ccaatgtcca tgggctacca gccgtacaat atgcagaatc
     2281 tcatgaccgc ccttcccggg caggatgcgt ctctgccagc ccagcagccc tacatcccag
     2341 ggcagcagcc cctgtaccag cagatggccc ccagcaccgg ccctccccag cagcaacccc
     2401 ctgtggccca gccagcgcct acacagggac cgccagcaca gggcagtgag gcccagctca
     2461 tctcctttga ctgaccttga gtctggcgct caccatgcag agtaacacta cagttcacca
     2521 gaaaccactt atatgtctaa ctagccattc ctcccctatt actgccctgt agtgtccctt
     2581 ctgtgagcaa ggggtgggcc ttcccccttg gccctcttcc ctgtcctcgg tggtctggct
     2641 cctatcactg gttccctgct tcagtcctga tgccgtctga cctccccggg actggggctc
     2701 tgcagggcaa gtagaacctt ctctggagag tgcccggctg tgttgggtgc cacaggtgaa
     2761 tgctgtgggg atgcttagcc tggcccggag tctgatgtga actaactgtg tggtgtccag
     2821 gcctggccct ggtacccaga agaaccatgt ggctcctgca cagcaagggt agaagcttta
     2881 ggtatctctg tctccccttc tccttggatg tcatctctca gtgcagagca gtgaaaataa
     2941 aatgtatttc aaaactct
//
