LOCUS       NM_019487               1910 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus heme binding protein 2 (Hebp2), mRNA.
ACCESSION   NM_019487
VERSION     NM_019487.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Mikasa,T., Kugo,M., Nishimura,S., Taketani,S., Ishijima,S. and
            Sagami,I.
  TITLE     Thermodynamic Characterization of the Ca2+-Dependent Interaction
            Between SOUL and ALG-2
  JOURNAL   Int J Mol Sci 19 (12), 3802 (2018)
   PUBMED   30501057
  REMARK    GeneRIF: Results provide a better understanding of the target
            recognition mechanism and conformational change of SOUL in the
            interaction with ALG-2.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1910)
  AUTHORS   Sato,E., Sagami,I., Uchida,T., Sato,A., Kitagawa,T., Igarashi,J.
            and Shimizu,T.
  TITLE     SOUL in mouse eyes is a new hexameric heme-binding protein with
            characteristic optical absorption, resonance Raman spectral, and
            heme-binding properties
  JOURNAL   Biochemistry 43 (44), 14189-14198 (2004)
   PUBMED   15518569
  REMARK    GeneRIF: The heme-binding properties and coordination structure of
            SOUL protein are distinct from those of mouse liver p22HBP, despite
            high sequence homology.
REFERENCE   4  (bases 1 to 1910)
  AUTHORS   Zylka,M.J. and Reppert,S.M.
  TITLE     Discovery of a putative heme-binding protein family (SOUL/HBP) by
            two-tissue suppression subtractive hybridization and database
            searches
  JOURNAL   Brain Res Mol Brain Res 74 (1-2), 175-181 (1999)
   PUBMED   10640688
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC153561.5.
            
            On Nov 17, 2006 this sequence version replaced NM_019487.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK078130.1, AK078041.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-383               AC153561.5         123081-123463       c
            384-519             AC153561.5         122465-122600       c
            520-700             AC153561.5         121652-121832       c
            701-1910            AC153561.5         117510-118719       c
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 7.76 cM"
     gene            1..1910
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /note="heme binding protein 2"
                     /db_xref="GeneID:56016"
                     /db_xref="MGI:MGI:1860084"
     exon            1..383
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /inference="alignment:Splign:2.1.0"
     exon            384..519
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /inference="alignment:Splign:2.1.0"
     exon            520..700
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /inference="alignment:Splign:2.1.0"
     exon            701..1910
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1249..1254
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /note="hexamer: AGTAAA"
     polyA_site      1275
                     /gene="Hebp2"
                     /gene_synonym="SOUL"
                     /note="major polyA site"
ORIGIN      
        1 gagggactct gcagaggacc tagatgaccc agggccagcc ggccgatcct gatcagtctg
       61 atcagctagc tgatcctgac cttatccctg cagaggggtg tggccagggc tggcgcaagc
      121 ctgaggttgg tcgcgacgcc gccttgtggc tcagaccgag aatgtcctac ggacccgcag
      181 taagggctgc agggccgagc gtgcgccggt ggggagggga ctcagaacag ggtggccggt
      241 gaacacaaac agggcgcgcc cctcccaagc tgcccttact catggcagag gagccggagc
      301 cagacctcgg ggtggccgag ggctcagagg atcaggcctt ggagatgccg agctggaaag
      361 ctccggagga catagacccc cagccaggaa gttatgagat ccggcactac ggaccggcta
      421 agtgggtcag cacttgcgtg gagtccctgg actgggattc agccatccag actggtttca
      481 caaaattgaa tggctacatt caaggcaaaa atgagaaaga gatgaaaatc aagctgacag
      541 cccccgtgac aagctacgtg gagcccggct caagtccttt cagtgagtct accattacga
      601 tttccctgta catcccctct gagcagcaac ccgatccacc caggccttca gagtcagatg
      661 tcttcattga agacagagct gaaatgacgg tgttcgtgcg gtcttttgat ggattctcca
      721 gtggccaaaa gaatcaagaa caacttttga ccttagcaaa cattctgagg gaagaaggga
      781 aagttttcaa cgaaaaggtc ttttacactg caggctacag cagtcctttc caattacttg
      841 atagaaataa cgaagtgtgg ctgattcaga aaaatgagcc ctccgtcgag aacaaataag
      901 gaagcaaaga aatgaagcag gggcagacct gctgctgaat gcagacatcg agagcactca
      961 taggcgacat atgtagtgtt ttcggcttga gctaccactc tgcatcatgc ttattcctaa
     1021 tgtgcctttg taggtagctt tatttagatc cagagcattc agacaaatct gtaaatgggt
     1081 cctaactcag gtggcctcca tttctgagag gatccaggac aacgccacgg cctttccctc
     1141 cgactggcgc tatcaccgtt atcttgcctc tctccttggc cttagggcat tcagatgctc
     1201 tcccttcctt aataacactg aaaatggtaa tgatggattc tgcacagaag taaattatgt
     1261 tggctacaaa gataactttc cttgcctccg ctgttgcgtt tttccattgg atccgtgtcc
     1321 tcatccaact gttgctccct gaacaaagac agttcttacc ttaacacgtt gacaaaattt
     1381 ggaggcagaa aataaattct atgagatgat gagacctcct acgctacatg acaggtgtgc
     1441 cttttcaaga aatacactga tacctaattg taacagtcac ttgaattttt acagtgtgta
     1501 gtcattctag aggttgtatg gacattctct gtccaacggt gggctgctgc atagacatgg
     1561 aggttagaaa gccttgcctc cttgcactaa gtcttgttat tgggaagatc aagtcacact
     1621 cagatccctg gcagctgtta gatggcgctc actctgatgc aggctcctgg gaagatggct
     1681 ctgacagtgt aaagcaagtt agatcttggg aacctcgtga taattaaagc tgctcacaag
     1741 tggcatgctt tccacgtctg tgtaagcaga ggccacacag ttgcttcttg agaaatgacc
     1801 atagagtcga ctgaaggtcc agtaaattgg ataaagctaa atgagacatg aaatccctcc
     1861 aacttgaatg ttataaggta tctttgtaaa attaaactct ctagatcagc
//
