LOCUS       NM_001045543            1856 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus HEAT repeat containing 9 (Heatr9), mRNA.
ACCESSION   NM_001045543 XM_001002149 XM_894169 XM_987728
VERSION     NM_001045543.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Stairiker,C.J., van Meurs,M., Leon,L.G., Brouwers-Haspels,A.A.,
            Rijsbergen,L., Mueller,Y.M. and Katsikis,P.D.
  TITLE     Heatr9 is an infection responsive gene that affects cytokine
            production in alveolar epithelial cells
  JOURNAL   PLoS One 15 (7), e0236195 (2020)
   PUBMED   32678841
  REMARK    GeneRIF: Heatr9 is an infection responsive gene that affects
            cytokine production in alveolar epithelial cells.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Nagamachi,A., Matsui,H., Asou,H., Ozaki,Y., Aki,D., Kanai,A.,
            Takubo,K., Suda,T., Nakamura,T., Wolff,L., Honda,H. and Inaba,T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL596122.14.
            
            [WARNING] On May 8, 2024 this sequence was replaced by
            NM_001045543.3.
            
            On Mar 16, 2013 this sequence version replaced NM_001045543.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.144017.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-136               AL596122.14        33307-33442         c
            137-186             AL596122.14        31928-31977         c
            187-371             AL596122.14        30449-30633         c
            372-498             AL596122.14        30053-30179         c
            499-555             AL596122.14        29777-29833         c
            556-612             AL596122.14        29514-29570         c
            613-670             AL596122.14        28458-28515         c
            671-801             AL596122.14        27961-28091         c
            802-984             AL596122.14        26517-26699         c
            985-1074            AL596122.14        26048-26137         c
            1075-1194           AL596122.14        25845-25964         c
            1195-1268           AL596122.14        24608-24681         c
            1269-1320           AL596122.14        24177-24228         c
            1321-1407           AL596122.14        23711-23797         c
            1408-1856           AL596122.14        23022-23470         c
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 50.61 cM"
     gene            1..1856
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /note="HEAT repeat containing 9"
                     /db_xref="GeneID:629303"
                     /db_xref="MGI:MGI:3650286"
     exon            1..136
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            137..186
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            187..371
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            372..498
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            499..555
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            556..612
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            613..670
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            671..801
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            802..984
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1074
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            1075..1194
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            1195..1268
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            1269..1320
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1407
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
     exon            1408..1856
                     /gene="Heatr9"
                     /gene_synonym="Gm11435"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcttggcttc acgtccctga acttctggct gctctggttc tcctctaacc tataccaaag
       61 aggatggaga gccaagaaaa acaggctgat ttttttcaaa tccccaagtc aatggactat
      121 cgaaaccgga acaaaaaatt cagaaaagcc atggctcctg ttcacctgcc cttgtcctgt
      181 tacaaggtgc caaaggaagc atttccccca agtccagagt gctggagggt gcatccaagc
      241 aggccaaacg caacgccttg cctccactta gataaaaagc ccgatctctt cacacactgg
      301 cgcaccctca atgagcaacg caaggaacgg gagtcaaaat cgttgttttg gaaaagaaga
      361 aacttcccaa ggtacttcaa agacagtgcc caaatgccaa acctccatgt ctctatcagc
      421 aagttgactt taaaacctaa ggagggacca gggttgttag atcccaccaa agaccccctg
      481 aagtggcaaa ggttaaagga actcaccaac ggcttgaact ccccacaaga ggatgaacag
      541 tgctatgcag cctacgcttt agggcacctg ggcatcagta acaagtttgt catggaagca
      601 ctgtggcagg tggctcaaac tggttcaaca aaagtgaaga acgaggccta taagtccctg
      661 gccagcctag gttgcttgga taagtctgtg atcaaggctt tcatcaaaca gttgatggaa
      721 cacaaggaaa gtcaaaggct ggagaccctg gtggggctac gagtagcgct gaactcctgg
      781 gctgctatgc ctaagaacaa gaagcccgag gtcccctatg aggaaaagct ggtgcttctg
      841 ctgcagaatc tgatatacaa gccactgaat gaagaatcct tagaggcagc cctgtgcttg
      901 gggttcctga ggcccagcaa cagcatagtc caacagttct tgctacaatg tctgagtaaa
      961 gggtccatgt cccagaggat gaaggcacta aggatgctgg tcaagatgat gaatgttcac
     1021 tcagctgctg tcaccagggc cattttggaa cagctacact ctaatgtcat tgacgatcgc
     1081 ttggaagcca cccagatgct caagactgtt gggctggaaa agatccaggc acaggggctg
     1141 gtgaaactta catttgactt gctcaagagg aaaatgtata gtgaaccctt ccaagtaata
     1201 aggcaggctg tgtctgaaac cgtggatgtg ctcaagatga agcctttaat aatgaaacta
     1261 atggaggcgc aactgatgag cccagatgtc agtgaccgtc aggaagcaat catctctttg
     1321 ggtgccctgg ggatccgtaa cgaaaaggtg ttccatttgc tgctggacat gctagatgca
     1381 gaagagacca agagtgtgaa gaagagcata caagaaacac tacttgtttg ggcctcaaga
     1441 aatccatgga tccaaaacaa gctgaccaac aaggttttct ttgtgtatga cataccgaag
     1501 gctgtgaaga cagagcatac aaggttccgg aagaagccag agagcccaga tgacttgtgc
     1561 atcacggact ttcgacgggc taagctgaac cctttgttta taacaaaggc ctacaacaag
     1621 ctaggggaaa agctagaggc acctgctttc tcattctatt tctccaaacc gaaaaagcaa
     1681 aggccacagg ccacaggacc ttgggaacca aaaatcaggg aacaactccg gaacatggtg
     1741 ttgcctcaaa ataggtttct tttttggctc taattccaat tcttcccttc aggatggttt
     1801 cctgggaaga tagctcgttt ttctctttta tgaatgaaca cttgcttggc gcttta
//
