LOCUS       NM_024257               1098 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus haloacid dehalogenase-like hydrolase domain containing
            3 (Hdhd3), mRNA.
ACCESSION   NM_024257
VERSION     NM_024257.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC003491.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC003491.1, AK013245.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 33.16 cM"
     gene            1..1098
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /note="haloacid dehalogenase-like hydrolase domain
                     containing 3"
                     /db_xref="GeneID:72748"
                     /db_xref="MGI:MGI:1919998"
     exon            1..43
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            44..1083
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..955
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /codon_start=1
                     /product="haloacid dehalogenase-like hydrolase
                     domain-containing protein 3"
                     /protein_id="NP_077219.1"
                     /db_xref="CCDS:CCDS18242.1"
                     /db_xref="GeneID:72748"
                     /db_xref="MGI:MGI:1919998"
                     /translation="MAHRLQMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDIT
                     VEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLY
                     EDFSSPFTWQVLEGAEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTS
                     EAVGCPKPDPRIFREALQRACVEPAVAAHVGDSYLCDYQGSQAVGMHSFLVAGSEPLD
                     SAVRDSVPKEHILPSLSHLLPALDLLEASSPMS"
     regulatory      983..988
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1003
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /note="major polyA site"
     polyA_site      1078
                     /gene="Hdhd3"
                     /gene_synonym="2810435D12Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggtggagcag ccgctgcgtc tcaggtctct tttcccgagc caggatcttg tgctgaaagc
       61 catttccaaa gtgccttggg acagcctacc cctctgacct acacagcctg gaaaagagcc
      121 actgttagcc tgtagagggg tggcctgaac cagctcagta gctcctttga ttctgggatc
      181 tgcactgaac ttgatctcca tggcacaccg gctgcagatg cgtctgctga cgtgggatgt
      241 aaaggatact ctgatcaagc tccgccgacc cgtcggggag gaatatgcca gcaaggcccg
      301 ggcccatgga gtggtggtgg aagacataac cgtggaacaa gccttcaggc aggcataccg
      361 ggctcagagc cacaacttcc ccaactatgg cctgagccgt ggccttactt cccgtcaatg
      421 gtggaaggac gtggtcctac acaccttccg cctagcaggg gtcccagatg cccaggccat
      481 gactccagtt gctgaccagc tatacgaaga cttcagcagc cctttcacct ggcaggtgtt
      541 ggagggggct gagatgaccc tgaaggggtg ccgtaagcgg ggtctgaagc tggcagtggt
      601 ctccaacttt gaccgacgac tagaggatat cctaacaggc cttggcctgc gagaacattt
      661 tgattttgtt ttgacttctg aggctgtggg ctgtcctaaa cccgacccac ggattttccg
      721 tgaggctctg cagcgcgctt gtgtagaacc tgcagtggcg gcccacgtgg gggatagtta
      781 cctctgtgat taccaggggt ctcaggctgt gggcatgcac agcttcctgg tagcgggctc
      841 agagcctctg gactctgcag tcagagattc tgtacctaag gaacatattc taccctccct
      901 ctcccatctc ctgcctgccc ttgaccttct ggaggcctca agccctatgt catgagtctg
      961 gtgagggaag tagctgggac caaataaaca ctggaggcag ggagtccctt ctctctcacc
     1021 tctcctgcag agggaggtgt ctcggctctc ctgctgcagc ctccataatt taatctgagc
     1081 ataaaaaaaa aaaaaaaa
//
