LOCUS       NM_008232               1994 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus HDGF like 1 (Hdgfl1), mRNA.
ACCESSION   NM_008232
VERSION     NM_008232.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Sun,J., Lu,Y., Nozawa,K., Xu,Z., Morohoshi,A., Castaneda,J.M.,
            Noda,T., Miyata,H., Abbasi,F., Shawki,H.H., Takahashi,S.,
            Devlin,D.J., Yu,Z., Matzuk,R.M., Garcia,T.X., Matzuk,M.M. and
            Ikawa,M.
  TITLE     CRISPR/Cas9-based genome editing in mice uncovers 13 testis- or
            epididymis-enriched genes individually dispensable for male
            reproductiondagger
  JOURNAL   Biol Reprod 103 (2), 183-194 (2020)
   PUBMED   32588039
REFERENCE   3  (bases 1 to 1994)
  AUTHORS   Izumoto,Y., Kuroda,T., Harada,H., Kishimoto,T. and Nakamura,H.
  TITLE     Hepatoma-derived growth factor belongs to a gene family in mice
            showing significant homology in the amino terminus
  JOURNAL   Biochem Biophys Res Commun 238 (1), 26-32 (1997)
   PUBMED   9299445
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL662807.8.
            
            On Jul 22, 2009 this sequence version replaced NM_008232.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK133357.1, BC108388.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1994              AL662807.8         98034-100027        c
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     gene            1..1994
                     /gene="Hdgfl1"
                     /gene_synonym="4921520N01Rik; Hdgfrp1; HRP-1; Pwwp1"
                     /note="HDGF like 1"
                     /db_xref="GeneID:15192"
                     /db_xref="MGI:MGI:1194493"
     exon            1..1994
                     /gene="Hdgfl1"
                     /gene_synonym="4921520N01Rik; Hdgfrp1; HRP-1; Pwwp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             78..929
                     /gene="Hdgfl1"
                     /gene_synonym="4921520N01Rik; Hdgfrp1; HRP-1; Pwwp1"
                     /note="PWWP domain containing 1; hepatoma-derived growth
                     factor, related protein 1; hepatoma derived growth
                     factor-like 1"
                     /codon_start=1
                     /product="hepatoma-derived growth factor-like protein 1"
                     /protein_id="NP_032258.2"
                     /db_xref="CCDS:CCDS26388.1"
                     /db_xref="GeneID:15192"
                     /db_xref="MGI:MGI:1194493"
                     /translation="MSCFSRSKYKTGDLVFAKLKGYAHWPARIEHVAEANRYQVFFFG
                     THETALLGPRHLFPYEESKEKFGKPNKRRGFSEGLWEIEHDPMVEASSSLCSEEDQSY
                     TEDPGLAEEPELGQELVQELEPEFMPELEAEPEMPETECEQEPEPQPAYDLLDAVEEP
                     GLTKAEPGDQQAEHVQEKHPEVEAEAEAEAEAEAEAEAEAKAEVEEPGSLKRSAEDEE
                     PHCPLKRPREAAPGALEMEPAEEREAEACPFVEEPDQAQEQLPPLEEEATEKAVQGLI
                     VGEIEGL"
     regulatory      1969..1974
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Hdgfl1"
                     /gene_synonym="4921520N01Rik; Hdgfrp1; HRP-1; Pwwp1"
                     /note="hexamer: AATAAA"
     polyA_site      1993
                     /gene="Hdgfl1"
                     /gene_synonym="4921520N01Rik; Hdgfrp1; HRP-1; Pwwp1"
                     /note="major polyA site"
ORIGIN      
        1 gcactctacc cagtggcctg agcagacgcg gtagtcagct tccggtggcc aaggaggggg
       61 cgcccagagc acacgctatg tcttgcttca gccgctctaa gtacaagacc ggggacctgg
      121 tgtttgccaa gttaaagggc tatgcccact ggccagcgag gatcgaacat gtcgctgaag
      181 ccaaccgcta ccaggtgttc ttcttcggga cccatgagac cgccctgctg ggtcccaggc
      241 acctgttccc ttatgaggag tccaaagaga agttcggcaa gcccaacaag aggcgcggct
      301 tcagcgaggg gctgtgggag atcgagcacg accctatggt tgaggcctcc tctagcctgt
      361 gctcagaaga ggatcagagc tacacagagg atcctgggct agcagaggag ccggaactag
      421 gacaggagct ggtgcaggag ctggagcccg aattcatgcc tgagctggag gcagaacctg
      481 agatgcctga gaccgagtgt gaacaggagc ccgagcccca gcctgcctat gacctgctgg
      541 acgccgtgga ggagccgggc ctcaccaagg ccgagccagg agatcagcaa gccgagcatg
      601 tgcaagagaa gcaccctgag gtggaggcag aggctgaggc tgaggctgag gccgaggcag
      661 aggcggaggc ggaggccaag gctgaggtgg aggagccggg gagtctgaag aggagcgcgg
      721 aggatgaaga gcctcattgt cctctcaaac ggcccaggga ggcggctcct ggtgcgttgg
      781 agatggagcc tgctgaagag cgcgaggctg aggcctgccc cttcgtggag gagcctgacc
      841 aagcccagga gcagctgcct ccgttggagg aagaggccac agaaaaggcg gtccagggcc
      901 tgattgttgg agaaatagaa ggcctgtagt cacggtgttt gtagaagagc cccttttacc
      961 cgttcctgct gccacctggc tgtggcttgg gaaacccact agggcccagt cttcaaccca
     1021 gtccacctct ccttcattca ttcgccttct acaagcctaa attcctggca tgaggggaca
     1081 ggccagttga catcaacttt gtggcttaag tagtgaccac ccttcccacc ctaaactctt
     1141 aggggcattt tggacctctg cctaggaacc aggagtgaag agggatggaa gatgaagagc
     1201 agggacaaca ttcaaaggtc tggaaggaac agtctgtaaa ctatggcgat gctagtctac
     1261 tccacaccca ccctgagtgc cgcccataat tcctttcaga gtactgtagg ttcggggaaa
     1321 gtgagacagc agtgtccagt aaagattttt gttgtcccag tcactttctt tctttctttt
     1381 tttttttttt acaaaaactt ttggggctct caagtcataa gatctgaaag actttgccct
     1441 tttgggttga agaggtgaga catcctctcc acatctcttg ggccactgaa ggaaacttca
     1501 gctgctcctt tgaatccacc ctggagcccc aagcctttag tcatacatat ataacttaaa
     1561 cataagaata ctttagaaac tatctttatt tttaaaggaa ttttactata tttataaaga
     1621 tcaaactttg gttgcaactc ctagttttcc tgtggccaat ctcatatccc ttattgcttg
     1681 gggtttgatg acctgcttgt tgttaaggct ttgctttcct taaggtgctg caatttctat
     1741 ctgcatgtca gcacctgggc ccctcagtgt tgtcacctac tgcaaaatgt actcagaagt
     1801 taagtgtccc ttcccagcct cttctgtctc tccacacctt tgtacctgga ccctcttggc
     1861 cctgctcttt ccccttgggc tctgatgaaa aaaaaaaaaa aaaaaaaaaa gataactata
     1921 cctttggagg tttaaatcgg agaaccgtag actatttcag ttttaggaaa taaaaccgtt
     1981 gatcacttta aaac
//
