LOCUS       NM_146089               1313 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus HAUS augmin-like complex, subunit 1 (Haus1),
            transcript variant 1, mRNA.
ACCESSION   NM_146089
VERSION     NM_146089.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY106914.1, AK146923.1, CD545676.1 and AC162291.13.
            
            On Nov 4, 2017 this sequence version replaced NM_146089.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC024400.1, AK146923.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164140
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-25                BY106914.1         2-26
            26-1022             AK146923.1         4-1000
            1023-1294           CD545676.1         1-272               c
            1295-1313           AC162291.13        115081-115099
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 52.38 cM"
     gene            1..1313
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /note="HAUS augmin-like complex, subunit 1"
                     /db_xref="GeneID:225745"
                     /db_xref="MGI:MGI:2385076"
     exon            1..80
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..887
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /note="isoform 1 is encoded by transcript variant 1;
                     coiled-coil domain-containing protein 5; spindle
                     associated"
                     /codon_start=1
                     /product="HAUS augmin-like complex subunit 1 isoform 1"
                     /protein_id="NP_666201.1"
                     /db_xref="CCDS:CCDS29357.1"
                     /db_xref="GeneID:225745"
                     /db_xref="MGI:MGI:2385076"
                     /translation="MAAPEEKALQVAEWLKKVFGDHPIPQYEMNSRTTEILYHLSERN
                     RVRDRDISLVIEDLKQKASEYESEAKRLEDFLMESVNFSPANLSKSGSRFLNALVDSA
                     IALEIKDTSLASFIPAVNDLTSDLFRTKSKSEEMKLELGKLEKNLTATLVLEKCLRED
                     LKKAELQLSAEKAKVDSRLQNMDFLKAKAAEFRFGIKAAEEQLSARGMDASLSHRSLA
                     ALSEKLSELKEQTIPLKKKLESYLDLMPSPSLAQLKIEEAKRELDAIEAELTKKVDMM
                     GL"
     exon            81..255
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            256..391
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            392..526
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            527..650
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            651..716
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            717..788
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            789..836
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     exon            837..1313
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /inference="alignment:Splign:2.1.0"
     regulatory      999..1004
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /note="hexamer: AATACA"
     polyA_site      1023
                     /gene="Haus1"
                     /gene_synonym="Ccdc5; HEI-C"
                     /note="major polyA site"
ORIGIN      
        1 agggacgttc cccgcgaggc tttgagattg aggtggcggg agcggcggct atggctgcgc
       61 cggaggagaa agcattgcag gtcgctgagt ggttgaaaaa ggtatttgga gaccatccca
      121 tcccacaata tgagatgaac tcacggacga cagaaatttt atatcacctt tcagaacgca
      181 acagggtccg ggacagggac atcagcctgg taatagagga cttaaaacag aaagcaagtg
      241 aatatgaatc cgaagccaaa cgtcttgaag actttctcat ggagagtgtg aatttttcac
      301 ctgccaatct gtctaagtct ggttcccggt ttctgaatgc actggtagac agtgcaattg
      361 ccctggaaat aaaagatact tcactagcaa gcttcatccc cgcagtgaat gatttgacgt
      421 ctgacctttt tcgtaccaaa tccaaaagcg aagaaatgaa gcttgaactg ggaaaacttg
      481 aaaagaacct gacggcaacg ctggtgttag aaaaatgtct acgagaagat ctcaagaaag
      541 cagagctgca actgtctgca gaaaaggcca aggttgacag tcgccttcag aatatggact
      601 tcctaaaagc gaaggcagcg gagttccggt ttggaatcaa agctgcagag gagcaacttt
      661 cagccagagg catggatgcg tctctgtctc atcggtcact agcggcactt tcagagaaac
      721 tctcggagtt aaaagagcag actatacccc tgaagaagaa gttggagtcc tatttagatt
      781 taatgccgag tccatctctt gctcaactga aaattgaaga ggcaaagaga gaattagacg
      841 ccatagaggc tgaacttacc aagaaagtag acatgatggg cctgtgagga cagccatgta
      901 gacgtggtca ggggaaggag gtgactgttc ttagagatga tgatgtctct attagtaaaa
      961 caacagggtt cgcttctgcc tttaaacttt gtggcctgaa tacagtttgc atatgaaaag
     1021 gcatttcttg ttatctgttg ctcacggtac acctcaaggg ttacctgcta cttactgaac
     1081 acctcacagt taagaatctt tccataagtg ggtagggggg ctggtgagat ggctcagtgg
     1141 gtaagagcac ccgactgctc ttccgaaggt ccagagttca aatcccagca accacatggt
     1201 ggctcacaac catccccaac aagatctgac tccctcttct ggtgtgtctg aagacagctt
     1261 cagtgtactt acatataata ataaataaat ctttaaaaaa aaaaaaaaaa aaa
//
