LOCUS       NM_001177775             952 bp    mRNA    linear   ROD 06-FEB-2024
DEFINITION  Mus musculus histocompatibility 60b (H60b), mRNA.
ACCESSION   NM_001177775 XM_989538
VERSION     NM_001177775.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Takada,A., Yoshida,S., Kajikawa,M., Miyatake,Y., Tomaru,U.,
            Sakai,M., Chiba,H., Maenaka,K., Kohda,D., Fugo,K. and Kasahara,M.
  TITLE     Two novel NKG2D ligands of the mouse H60 family with differential
            expression patterns and binding affinities to NKG2D
  JOURNAL   J Immunol 180 (3), 1678-1685 (2008)
   PUBMED   18209064
  REMARK    GeneRIF: Identified two novel mouse chromosome 10-encoded NKG2D
            ligands, H60b and H60c, structurally resembling H60.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AB284505.1.
            
            On Apr 28, 2010 this sequence version replaced XM_989538.2.
            
            ##Evidence-Data-START##
            CDS exon combination :: AB284505.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849385, SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-952               AB284505.1         78-1029
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 9.96 cM"
     gene            1..952
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /note="histocompatibility 60b"
                     /db_xref="GeneID:667281"
                     /db_xref="MGI:MGI:3649078"
     exon            1..56
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /inference="alignment:Splign:2.1.0"
     exon            57..172
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /inference="alignment:Splign:2.1.0"
     CDS             97..852
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /note="histocompatibility antigen 60b"
                     /codon_start=1
                     /product="histocompatibility antigen 60b precursor"
                     /protein_id="NP_001171246.1"
                     /db_xref="CCDS:CCDS48520.1"
                     /db_xref="GeneID:667281"
                     /db_xref="MGI:MGI:3649078"
                     /translation="MAKSSLSLNWSLLVLLNFLGATLSTGTDSLSCELTFNHRTLHGQ
                     CSVNGKTLLDFGDKKHEGNATEMCADLSQSLRELSEGMRNQQSGNDALNVTTQSQYNQ
                     GEFIGGFWAINTDEQHSIYFYPLNMTWRESHSDNSSAMEHWKNKNLEKDIRNVLIIYF
                     SRCLNKLSPHFREMPKSKIKVLDTTQNTNTTQIHPTVNNSQHNSDTQGLSFTWIVIIC
                     IGGIVSFMAFMVFAWCMLKKKKGALCCSSSSTT"
     exon            173..358
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /inference="alignment:Splign:2.1.0"
     exon            359..622
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /inference="alignment:Splign:2.1.0"
     exon            623..817
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /inference="alignment:Splign:2.1.0"
     exon            818..952
                     /gene="H60b"
                     /gene_synonym="EG667281"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcgggggca gacagacact ccagcttcgc aggaggccgg cgcccctgca ccgcagctct
       61 attcacacca taggcagcag gctctcaaga aggatcatgg caaagagcag tctttccttg
      121 aattggagcc ttttggtcct gctgaatttt ctgggggcca cactgtcaac tggtacagac
      181 tctctaagtt gtgaattaac tttcaaccat cgtactctac atggacagtg ctcagtgaat
      241 ggaaagacac tccttgattt tggtgataaa aaacatgagg gaaatgctac agagatgtgt
      301 gctgatttgt cccaaagcct gagagagctt tcagaaggga tgaggaacca gcaatcaggt
      361 aatgatgcct tgaatgtcac aacacaatct cagtataatc aaggagaatt cattggtgga
      421 ttctgggcca tcaacactga tgaacagcat agcatctact tttatccact taatatgacc
      481 tggagagaga gtcattctga taacagcagt gccatggagc actggaagaa caagaaccta
      541 gagaaagata tcaggaatgt cctcatcata tatttcagtc gctgcctcaa caaattgtca
      601 ccacacttta gagaaatgcc aaaatcaaaa ataaaggtgc tggataccac ccagaataca
      661 aataccactc agattcatcc tacagtgaat aactcccaac ataattctga cacccagggt
      721 ctgagtttca cctggattgt gattatatgt ataggaggaa tagtgtcttt catggcattc
      781 atggtattcg cttggtgtat gctgaagaaa aaaaaaggtg ctctctgctg ctcctcttcc
      841 tctacaacct gatcaacagt tctcataaca agctgtgctg gggagattct tgaacattgc
      901 ctgtgcatct tcagcaaaga aagcaaacat atttctgttg gaatctcgga aa
//
