LOCUS       NM_001081019             978 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus H3.5 histone (H3f5), mRNA.
ACCESSION   NM_001081019 XM_001001643
VERSION     NM_001081019.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Maehara K, Harada A, Sato Y, Matsumoto M, Nakayama KI, Kimura H and
            Ohkawa Y.
  TITLE     Tissue-specific expression of histone H3 variants diversified after
            species separation
  JOURNAL   Epigenetics Chromatin 8, 35 (2015)
   PUBMED   26388943
  REMARK    Publication Status: Online-Only
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AL732597.10.
            
            On Feb 6, 2007 this sequence version replaced XM_001001643.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR1660811.159354.1, SRR1660813.165083.1
                                    [ECO:0000331]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                AL732597.10        34378-34393
            17-978              AL732597.10        40086-41047
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 43.34 cM"
     gene            1..978
                     /gene="H3f5"
                     /gene_synonym="Gm12657; H3mm12"
                     /note="H3.5 histone"
                     /db_xref="GeneID:667250"
                     /db_xref="MGI:MGI:3651714"
     exon            1..16
                     /gene="H3f5"
                     /gene_synonym="Gm12657; H3mm12"
                     /inference="alignment:Splign:2.1.0"
     exon            17..978
                     /gene="H3f5"
                     /gene_synonym="Gm12657; H3mm12"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..454
                     /gene="H3f5"
                     /gene_synonym="Gm12657; H3mm12"
                     /codon_start=1
                     /product="uncharacterized protein LOC667250"
                     /protein_id="NP_001074488.1"
                     /db_xref="GeneID:667250"
                     /db_xref="MGI:MGI:3651714"
                     /translation="MARTKQTARKSTGGNSPRKQLATKAARKSAPSTGGVKKPHRYRP
                     GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASGAFLV
                     GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
ORIGIN      
        1 aacactttct gcccaggggg gtaagtaagg aggtgtccat accatggctc gtacaaagca
       61 gactgcccgc aaatccacgg gtggtaactc acccaggaaa caactggcta caaaagccgc
      121 tcgcaagagt gcgccctcta ctggaggggt gaagaaacct catcgttaca ggcctggtac
      181 tgtggcactc cgtgaaatca gacgctatca gaagtccact gaacttctga tccgcaagct
      241 cccctttcag cgtctggtgc gagaaattgc tcaggacttc aaaacagatc tgcgcttcca
      301 gagtgcagct attggtgctt tgcaggaggc aagtggggcc tttctggttg gcctttttga
      361 agataccaat ctgtgtgcta tccatgccaa acgtgtaaca attatgccaa aagatatcca
      421 gctagcacgc cgcatacgcg gagaacgtgc ttaagagtcc actatgaggg gaaacattta
      481 attctcaaaa gaattttttt ttcctcttct tcctgttatc agtagttctg aatgttagat
      541 attttttcca tggggtcaaa ggtacctaag tatatgattg cgagtggaga cataggggac
      601 agaatcaggt attggcgttt ctccacgttc atttgtgtgt gaatttttaa tataaatgca
      661 agatgtaaag cattaatgca agcaaaatgt ttcagtgaac atatttgagc agttcaactt
      721 tataacaatt ataaataaac ctgttaaaat tttctggaca atgccagcat ttggattttt
      781 aaaaaaataa gtaaatttct tattaacagc cactaaatgg tgtttatagc atttttatca
      841 cacagtagat tccatccatt cactatactt ttctgagttg tcctacatac aagtacatgt
      901 ttttaatgtt gtctgtcttc tgtgctgttc ctgtaagttt gctattaaaa tacattaaac
      961 tatatatata taaaaaga
//
