LOCUS       NM_013548                903 bp    mRNA    linear   ROD 01-JUL-2024
DEFINITION  Mus musculus H3 clustered histone 7 (H3c7), mRNA.
ACCESSION   NM_013548
VERSION     NM_013548.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Funaya,S., Takahashi,Y., Suzuki,M.G., Suzuki,Y. and Aoki,F.
  TITLE     H3.1/3.2 regulate the initial progression of the gene expression
            program
  JOURNAL   Nucleic Acids Res 52 (11), 6158-6170 (2024)
   PUBMED   38567720
  REMARK    GeneRIF: H3.1/3.2 regulate the initial progression of the gene
            expression program.
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Jing,M., Qiong,L., Wang,Z., Xiong,X., Fu,Y. and Yan,W.
  TITLE     Histone H3 activates caspase-1 and promotes proliferation and
            metastasis in hepatocellular carcinoma
  JOURNAL   Int J Med Sci 20 (5), 689-701 (2023)
   PUBMED   37082731
  REMARK    GeneRIF: Histone H3 activates caspase-1 and promotes proliferation
            and metastasis in hepatocellular carcinoma.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 903)
  AUTHORS   Vetrivel,S., Truong,D.J., Wurst,W., Graw,J. and Giesert,F.
  TITLE     Identification of ocular regulatory functions of core histone
            variant H3.2
  JOURNAL   Exp Eye Res 226, 109346 (2023)
   PUBMED   36529279
REFERENCE   4  (bases 1 to 903)
  AUTHORS   Kawamura,M., Funaya,S., Sugie,K., Suzuki,M.G. and Aoki,F.
  TITLE     Asymmetrical deposition and modification of histone H3 variants are
            essential for zygote development
  JOURNAL   Life Sci Alliance 4 (8), e202101102 (2021)
   PUBMED   34168076
  REMARK    GeneRIF: Asymmetrical deposition and modification of histone H3
            variants are essential for zygote development.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 903)
  AUTHORS   Vetrivel,S., Tiso,N., Kugler,A., Irmler,M., Horsch,M., Beckers,J.,
            Hladik,D., Giesert,F., Gailus-Durner,V., Fuchs,H., Sabrautzki,S.,
            Hrabe de Angelis,M. and Graw,J.
  TITLE     Mutation in the mouse histone gene Hist2h3c1 leads to degeneration
            of the lens vesicle and severe microphthalmia
  JOURNAL   Exp Eye Res 188, 107632 (2019)
   PUBMED   30991053
REFERENCE   6  (bases 1 to 903)
  AUTHORS   Marzluff,W.F., Gongidi,P., Woods,K.R., Jin,J. and Maltais,L.J.
  TITLE     The human and mouse replication-dependent histone genes
  JOURNAL   Genomics 80 (5), 487-498 (2002)
   PUBMED   12408966
REFERENCE   7  (bases 1 to 903)
  AUTHORS   McAleer,M.A., Aitman,T.J., Cornall,R.J., Ghosh,S., Hall,J.R.,
            Hearne,C.M., Love,J.M., Prins,J.B., Ramachandran,S., Rodrigues,N.
            et al.
  TITLE     Linkage analysis of 84 microsatellite markers in intra- and
            interspecific backcrosses
  JOURNAL   Mamm Genome 3 (8), 457-460 (1992)
   PUBMED   1643308
REFERENCE   8  (bases 1 to 903)
  AUTHORS   Holcombe,R.F., Stephenson,D.A., Zweidler,A., Stewart,R.M.,
            Chapman,V.M. and Seidman,J.G.
  TITLE     Linkage of loci associated with two pigment mutations on mouse
            chromosome 13
  JOURNAL   Genet Res 58 (1), 41-50 (1991)
   PUBMED   1682216
REFERENCE   9  (bases 1 to 903)
  AUTHORS   Aitman,T.J., Hearne,C.M., McAleer,M.A. and Todd,J.A.
  TITLE     Mononucleotide repeats are an abundant source of length variants in
            mouse genomic DNA
  JOURNAL   Mamm Genome 1 (4), 206-210 (1991)
   PUBMED   1794049
  REMARK    Review article
REFERENCE   10 (bases 1 to 903)
  AUTHORS   Mock,B.A., Krall,M., Kozak,C.A., Nesbitt,M.N., McBride,O.W.,
            Renauld,J.C. and Van Snick,J.
  TITLE     IL9 maps to mouse chromosome 13 and human chromosome 5
  JOURNAL   Immunogenetics 31 (4), 265-270 (1990)
   PUBMED   1970335
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AL592149.8.
            
            On Feb 27, 2014 this sequence version replaced NM_013548.3.
            
            Summary: Histones are basic nuclear proteins that are responsible
            for the nucleosome structure of the chromosomal fiber in
            eukaryotes. This structure consists of approximately 146 bp of DNA
            wrapped around a nucleosome, an octamer composed of pairs of each
            of the four core histones (H2A, H2B, H3, and H4). The chromatin
            fiber is further compacted through the interaction of a linker
            histone, H1, with the DNA between the nucleosomes to form higher
            order chromatin structures. This gene is intronless and encodes a
            replication-dependent histone that is a member of the histone H3
            family. Transcripts from this gene lack polyA tails; instead, they
            contain a palindromic termination element. [provided by RefSeq, Aug
            2015].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC101954.1, AI323498.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria        :: based on single protein-coding
                                             transcript
            replication-dependent histone :: PMID: 12408966
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-903               AL592149.8         24654-25556
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 9.78 cM"
     gene            1..903
                     /gene="H3c7"
                     /gene_synonym="H3.2-221; H3c13; H3c14; H3c15; H3c2; H3c3;
                     H3c4; H3c6; Hist1; Hist1h3f"
                     /note="H3 clustered histone 7"
                     /db_xref="GeneID:260423"
                     /db_xref="MGI:MGI:2448329"
     exon            1..903
                     /gene="H3c7"
                     /gene_synonym="H3.2-221; H3c13; H3c14; H3c15; H3c2; H3c3;
                     H3c4; H3c6; Hist1; Hist1h3f"
                     /inference="alignment:Splign:2.1.0"
     CDS             434..844
                     /gene="H3c7"
                     /gene_synonym="H3.2-221; H3c13; H3c14; H3c15; H3c2; H3c3;
                     H3c4; H3c6; Hist1; Hist1h3f"
                     /note="histone H3; histone 1, H3f; histone cluster 1, H3f;
                     histone gene complex 1; H3-clustered histone 2;
                     H3-clustered histone 3; H3-clustered histone 4;
                     H3-clustered histone 6; H3-clustered histone 13;
                     H3-clustered histone 14; H3-clustered histone 15"
                     /codon_start=1
                     /product="histone H3.2"
                     /protein_id="NP_038576.1"
                     /db_xref="CCDS:CCDS26344.1"
                     /db_xref="GeneID:260423"
                     /db_xref="MGI:MGI:2448329"
                     /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRP
                     GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLV
                     GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
ORIGIN      
        1 gttgggtgtg cctgttcggt tttattttgg tccggatagt aaactgctcc cttacatctc
       61 cttaaatata aagtaaggaa aaagaaaaaa ctcagttcgg gtaaccaagt tcaacaagta
      121 atccttgggg ccgctgtggt atcgccaaaa tctacatagt atctcttatt aaaatgtttt
      181 gacgaaaatg taacaattac ggtacttaat ggtaacaatg tggctgagga agcaatagtt
      241 aacaaagagg agtaagccag gtaataaacc agatttctat tggtcacaaa tttgaagttg
      301 agacctgtta tccaattacc aagtacttcc gcatacatca taggcatttg aagatttcaa
      361 ccaatcagga gcatgttcct tctataaaag gaacccagaa cctaacctct gcatttccta
      421 tttctttgta gaaatggctc gtactaagca gaccgctcgc aagtccactg gcggcaaggc
      481 cccgcgcaag cagctggcca ccaaggccgc ccgcaagagc gccccggcca ccggcggcgt
      541 gaagaaacct caccgctacc gtcccggcac cgtggcgctg cgcgagatcc ggcgctacca
      601 gaagtcgacc gagctgctga tccgcaagct gccgttccag cgcctggtgc gcgagatcgc
      661 gcaggacttc aagaccgacc tgcgcttcca gagctcggcc gtcatggctc tgcaggaggc
      721 gagcgaggcc taccttgtgg gtctgtttga ggacaccaac ctgtgcgcca tccacgccaa
      781 gcgtgtcacc atcatgccca aggacatcca gctggcccgc cgtatccgcg gcgagcgggc
      841 ttaataggca cgctttctac actggcacgt aaaccaaaac ggctctttta agagccacct
      901 cca
//
