LOCUS       NM_001102665             348 bp    mRNA    linear   ROD 25-FEB-2025
DEFINITION  Mus musculus H2A.B variant histone 1 (H2ab1), mRNA.
ACCESSION   NM_001102665 XM_001472670
VERSION     NM_001102665.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Lehtonen,H., Jokela,H., Hofmann,J., Tola,L., Mehmood,A.,
            Ginhoux,F., Becher,B., Greter,M., Yegutkin,G.G., Salmi,M., Gerke,H.
            and Rantakari,P.
  TITLE     Early precursor-derived pituitary gland tissue-resident macrophages
            play a pivotal role in modulating hormonal balance
  JOURNAL   Cell Rep 44 (2), 115227 (2025)
   PUBMED   39841599
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Molaro,A., Wood,A.J., Janssens,D., Kindelay,S.M., Eickbush,M.T.,
            Wu,S., Singh,P., Muller,C.H., Henikoff,S. and Malik,H.S.
  TITLE     Biparental contributions of the H2A.B histone variant control
            embryonic development in mice
  JOURNAL   PLoS Biol 18 (12), e3001001 (2020)
   PUBMED   33362208
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 348)
  AUTHORS   Anuar,N.D., Kurscheid,S., Field,M., Zhang,L., Rebar,E., Gregory,P.,
            Buchou,T., Bowles,J., Koopman,P., Tremethick,D.J. and Soboleva,T.A.
  TITLE     Gene editing of the multi-copy H2A.B gene and its importance for
            fertility
  JOURNAL   Genome Biol 20 (1), 23 (2019)
   PUBMED   30704500
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 348)
  AUTHORS   Soboleva,T.A., Parker,B.J., Nekrasov,M., Hart-Smith,G., Tay,Y.J.,
            Tng,W.Q., Wilkins,M., Ryan,D. and Tremethick,D.J.
  TITLE     A new link between transcriptional initiation and pre-mRNA
            splicing: The RNA binding histone variant H2A.B
  JOURNAL   PLoS Genet 13 (2), e1006633 (2017)
   PUBMED   28234895
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 348)
  AUTHORS   Soboleva,T.A., Nekrasov,M., Ryan,D.P. and Tremethick,D.J.
  TITLE     Histone variants at the transcription start-site
  JOURNAL   Trends Genet 30 (5), 199-209 (2014)
   PUBMED   24768041
  REMARK    Review article
REFERENCE   6  (bases 1 to 348)
  AUTHORS   Maze,I., Noh,K.M., Soshnev,A.A. and Allis,C.D.
  TITLE     Every amino acid matters: essential contributions of histone
            variants to mammalian development and disease
  JOURNAL   Nat Rev Genet 15 (4), 259-271 (2014)
   PUBMED   24614311
  REMARK    Review article
REFERENCE   7  (bases 1 to 348)
  AUTHORS   Nekrasov,M., Soboleva,T.A., Jack,C. and Tremethick,D.J.
  TITLE     Histone variant selectivity at the transcription start site: H2A.Z
            or H2A.Lap1
  JOURNAL   Nucleus 4 (6), 431-438 (2013)
   PUBMED   24213378
REFERENCE   8  (bases 1 to 348)
  AUTHORS   Soboleva,T.A., Nekrasov,M., Pahwa,A., Williams,R., Huttley,G.A. and
            Tremethick,D.J.
  TITLE     A unique H2A histone variant occupies the transcriptional start
            site of active genes
  JOURNAL   Nat Struct Mol Biol 19 (1), 25-30 (2011)
   PUBMED   22139013
  REMARK    Publication Status: Online-Only
REFERENCE   9  (bases 1 to 348)
  AUTHORS   Ishibashi,T., Li,A., Eirin-Lopez,J.M., Zhao,M., Missiaen,K.,
            Abbott,D.W., Meistrich,M., Hendzel,M.J. and Ausio,J.
  TITLE     H2A.Bbd: an X-chromosome-encoded histone involved in mammalian
            spermiogenesis
  JOURNAL   Nucleic Acids Res 38 (6), 1780-1789 (2010)
   PUBMED   20008104
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BX088543.11.
            
            On Sep 2, 2007 this sequence version replaced XM_001472670.1.
            
            CCDS Note: This gene lacks publicly available transcript support,
            but it is supported by data in PMID:20008104.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-348               BX088543.11        18798-19145
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 49.58 cM"
     gene            1..348
                     /gene="H2ab1"
                     /gene_synonym="Gm14920; Gm1539; H2A.B.3; H2A.Bbd1;
                     H2A.Lap1; H2afb1"
                     /note="H2A.B variant histone 1"
                     /db_xref="GeneID:100039319"
                     /db_xref="MGI:MGI:3642445"
     CDS             1..348
                     /gene="H2ab1"
                     /gene_synonym="Gm14920; Gm1539; H2A.B.3; H2A.Bbd1;
                     H2A.Lap1; H2afb1"
                     /note="predicted pseudogene 14920; H2A histone family
                     member B1"
                     /codon_start=1
                     /product="histone H2A"
                     /protein_id="NP_001096135.1"
                     /db_xref="CCDS:CCDS72425.1"
                     /db_xref="GeneID:100039319"
                     /db_xref="MGI:MGI:3642445"
                     /translation="MPRNRENCLRESSGRRHRRSRTSRAELIFAVSLVEQHLREISRA
                     WRLSDMVPIFLAAILESLTRRLLELAGNEAQRRGTERRITPELLDLAVYSNMELSDVF
                     QFITISQVAPAHR"
     exon            1..348
                     /gene="H2ab1"
                     /gene_synonym="Gm14920; Gm1539; H2A.B.3; H2A.Bbd1;
                     H2A.Lap1; H2afb1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgccaagga acagggaaaa ctgtcttcga gagtcttcag gtcgccgcca ccgtcgctcc
       61 cgcacctcca gagctgagct gatctttgca gtgagcctgg tggaacagca tctgagggag
      121 attagccgtg cctggaggct cagtgatatg gtgcccatct tcctggcagc catcctggag
      181 tccctcaccc gcaggttgct ggagcttgcg ggcaatgagg cccaacgcag aggtaccgag
      241 aggcgcatca ctcctgaact gctggacttg gctgtctaca gcaatatgga gctaagtgat
      301 gtgttccaat tcatcaccat ctcccaggtg gccccggctc atcgctag
//
