LOCUS       NM_001199967            1427 bp    mRNA    linear   ROD 23-AUG-2023
DEFINITION  Mus musculus histocompatibility 2, T region locus 27 (H2-T27),
            mRNA.
ACCESSION   NM_001199967
VERSION     NM_001199967.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Ohtsuka M, Inoko H, Kulski JK and Yoshimura S.
  TITLE     Major histocompatibility complex (Mhc) class Ib gene duplications,
            organization and expression patterns in mouse strain C57BL/6
  JOURNAL   BMC Genomics 9, 178 (2008)
   PUBMED   18416856
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  AUTHORS   Litaker W, Peace-Brewer A and Frelinger JA.
  TITLE     A physical map of the Q region of B1O.P
  JOURNAL   Mamm Genome 7 (3), 200-205 (1996)
   PUBMED   8833240
REFERENCE   3  (bases 1 to 1427)
  AUTHORS   Brown GD, Choi Y, Egan G and Meruelo D.
  TITLE     Extension of the H-2 TLb molecular map. Isolation and
            characterization of T13, T14, and T15 from the C57BL/6 mouse
  JOURNAL   Immunogenetics 27 (4), 239-251 (1988)
   PUBMED   2831142
REFERENCE   4  (bases 1 to 1427)
  AUTHORS   Steinmetz,M., Winoto,A., Minard,K. and Hood,L.
  TITLE     Clusters of genes encoding mouse transplantation antigens
  JOURNAL   Cell 28 (3), 489-498 (1982)
   PUBMED   6280871
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT030728.6.
            
            On Sep 7, 2022 this sequence version replaced NM_001199967.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB359227.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-169               CT030728.6         196253-196421
            170-439             CT030728.6         196597-196866
            440-706             CT030728.6         197019-197285
            707-982             CT030728.6         197876-198151
            983-1096            CT030728.6         198268-198381
            1097-1427           CT030728.6         198561-198891
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 18.88 cM"
     gene            1..1427
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /note="histocompatibility 2, T region locus 27"
                     /db_xref="GeneID:100529082"
                     /db_xref="MGI:MGI:3779381"
     exon            1..169
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1218
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /note="histocompatibility 2, T region locus 15; H2-GS14-2
                     antigen; MHC class I like protein GS14-2"
                     /codon_start=1
                     /product="predicted gene 11127 precursor"
                     /protein_id="NP_001186896.1"
                     /db_xref="CCDS:CCDS57078.1"
                     /db_xref="GeneID:100529082"
                     /db_xref="MGI:MGI:3779381"
                     /translation="MGTLTSCPLLLLLLATALAPTQAGKSSHSLRYFATAISRPGFGE
                     PRFTAVGYVDDTQFMRFDSDSENPRAEPCKPWVEQMEPEYWEQETRKFKEHTQNFRTC
                     LYNLLHLYNQSQDGPHTIQDMHGCYVGPDGQFLHGHYQHAYDGHDYITLNEDLSSWTA
                     ADAVAQITQHKWEEAGVAEEYKAYLEGTCVETLHRLLEEAQQHSDPPNTHVTRHPRPE
                     GDVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWAAVVVPLGKE
                     QNYTCHVHHEGLPEPLTLRWEPLPSTDSNMVIIAALVVFGAVIIIGAVVAFMMKRRNT
                     GGKGGVYCWEPRPHSPLQDGADSCVLSGKQIICACAKGIL"
     exon            170..439
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /inference="alignment:Splign:2.1.0"
     exon            440..706
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /inference="alignment:Splign:2.1.0"
     exon            707..982
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1096
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1427
                     /gene="H2-T27"
                     /gene_synonym="Gm11127; H-2T15; H2-gs14-2; H2-T15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaggaggt ccctagaaaa ggaaaagtag ctgtgattgc aagttaccaa gtccaggatt
       61 tatatcactg tactgagctc tctctatccc aggatgggga cccttacgag ttgccctcta
      121 cttctcctgc ttctggcgac cgccctggcc ccgacccaag cgggcaagag ctcacactcg
      181 ctgcggtatt tcgccactgc catatccagg ccaggcttcg gggagcctcg gttcaccgcc
      241 gtgggttacg tggacgacac acagttcatg cgcttcgaca gcgactctga gaatcccagg
      301 gccgagccat gcaagccatg ggtggaacag atggagcccg aatattggga gcaggagacg
      361 cggaaattca aggagcacac ccagaatttc cgaacttgcc tttacaacct actccacctg
      421 tataaccaga gtcaggacgg tccccacaca atccaggata tgcacggatg ctacgtggga
      481 ccagatggtc agttcctaca cgggcactat caacatgcct atgatggcca cgattacatc
      541 accctgaacg aggacctgag ctcctggacc gcagcagatg cagtggctca gatcactcaa
      601 cacaaatggg aggaggctgg agtggcagag gaatacaagg cctacctaga gggcacatgc
      661 gtggagacac tccacagatt gttggaggaa gctcagcaac actcagaccc cccaaataca
      721 catgtgaccc gtcaccccag acctgaaggt gatgtcaccc tgaggtgctg ggccctgggc
      781 ttctaccctg ctgacatcac cctgacctgg cagttgaatg gggaggagct gacccaggac
      841 atggagcttg tggagaccag gcctgcaggg gatggaacct tccagaagtg ggcagctgtg
      901 gtggtgcctc ttgggaagga gcagaattac acatgccatg tgcaccatga ggggctgcct
      961 gagccactca ccctgagatg ggagcctctt ccatccaccg actctaacat ggtaatcatt
     1021 gctgctctgg ttgtctttgg agctgtgatc atcattggag ctgtggtggc ttttatgatg
     1081 aagaggagaa acacaggtgg aaaaggaggg gtctattgtt gggagccgcg cccacattcg
     1141 ccgttacaag atggcgctga cagctgtgtt ctaagtggta aacaaataat ctgcgcatgt
     1201 gccaagggta tcttatgact acttgtgctc tgccttcccc gtgacgtcaa ctcggccgat
     1261 gggctgcagc caatcaggga gtgacacgtc cgaggcgaag gagaatgctc cttaagaggg
     1321 acggggtttc gttttctctc tctcttgctt cttgctctct tgcttcttgc tctcttgctt
     1381 cctgcaccct ggctcctgaa gatgtaagaa ataaagcttt gccgcag
//
