LOCUS       XM_036160888            3373 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus predicted gene, 53175 (Gm53175), mRNA.
ACCESSION   XM_036160888
VERSION     XM_036160888.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; corrected model.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1567              CU467494.10        4412-5978
            1568-1837           CU467494.10        6146-6415
            1838-2113           CU467494.10        6609-6884
            2114-2389           CU467494.10        8926-9201
            2390-2445           CU467494.10        9329-9384
            2446-2446           "N"                1-1
            2447-2506           CU467494.10        9385-9444
            2507-2539           CU467494.10        9622-9654
            2540-3373           CU467494.10        10062-10895
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..3373
                     /gene="Gm53175"
                     /note="predicted gene, 53175; The sequence of the model
                     RefSeq transcript was modified relative to its source
                     genomic sequence to represent the inferred CDS: inserted 1
                     base in 1 codon; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 31 ESTs, 4 long
                     SRA reads, 696 Proteins, and 84% coverage of the annotated
                     genomic feature by RNAseq alignments, including 34 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:68395"
                     /db_xref="MGI:MGI:6721442"
     CDS             1504..2553
                     /gene="Gm53175"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: H-2 class I
                     histocompatibility antigen, Q8 alpha chain"
                     /protein_id="XP_036016781.1"
                     /db_xref="GeneID:68395"
                     /db_xref="MGI:MGI:6721442"
                     /translation="MALTTLLLLVAAALTLIETRAGPHSLRYFHTAVSWPGLVEPRFI
                     IVGYVDDTQFVRFDSDAENPRMEPRARWMEQEGPEYWERETQKAKGHEESFRVSLRTA
                     QRYYNQSKGGSHTLQWMYGCDVGSDERLLRGYLQFAYEGRDYIALNEDLKTWTAADMA
                     AQITLHKWEQAGIAERDRAYLEGACVQSLRRYLQLRKETLLCTDPPKAHVTHHPRSYG
                     AVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQ
                     NYTCHVNHEGLPEPLTLRWEPPPSTVSNMANVAILVVLXSLAIIGAVVDFVMKRRRHT
                     GGQGGDYALAPENSV"
ORIGIN      
        1 tctgtgtgat gagtgactca ctttgggagt ccccacccat ctctgctctt ctttccactt
       61 cacttctgtg gctgctattt gaaaagatct acagaatcat gaaatgggta aatttaatct
      121 ttcctccaca ctactgatca gggatgaaac ctcacatcac cagtgtgtgc tctctggcat
      181 gagaatcatc tttcttccag tgtccacact gcacaggcct ggggaactct ggggccaact
      241 caattatcag aacccatgtc ccacacagct gtgacattca tgtccctcac ctcatcagct
      301 catacgtgtg agtgaaggtc agggagggag ggagagggtc agaaattaca tagcttctac
      361 catactatca tatttattct gtgttatagt tggtgacagt tcctctccta ctgtgattga
      421 gtcactaaag caactgcacc ttggaagtgc agaaatagag aagtgcagtg gagacagcga
      481 tcagtgccct gctgtctgtg gtctgcacag gggtctctct tcagtggaca aggggatctc
      541 ctgtgctgag tcccaggtct acacagacaa actcagaagg aagatctttg ttttaaaaaa
      601 caaaaacaaa acaaagattc cgggcgtggt ggcacatgcc tttaatccca gcacttggga
      661 ggcagaggca ggtggatttc tgagttcgag gccagcctgg agtacaaagt gagttccagg
      721 acagccagtg ctatacagaa aaaccctatc tctaaaaaaa aaaaaaaaaa aaccaaagaa
      781 gaaacaaaca aacaaacaaa caaacaaaaa ccctgcagcc acagctcttc aactaggagg
      841 taacacaagg aatctgtgag aagacagatc ctgaggagag aggcgaagtc tacacttaac
      901 tgatgagagt cctgcactca ggcttggaag tgtgagccgc ccattgcagg tgaacagagc
      961 ctggtctcta tggagtccat gtggggcttt gcagaccagc gcctctgctt taaggagaag
     1021 cctatcttca ctgcatcccc aagtgcttgt gtctccattg tattcccaga agtggcattt
     1081 cttctagaag actccaaggt ctgacttctg aagagaagaa ggaagaggaa gagtggagga
     1141 tagggcacag agagtatggc ctgcgggtct ctcctggtgt cctgacagct tctggatcag
     1201 aactcggaga caccatgaca aacagctctc tgtccccggc acagggttca ggcaaagtct
     1261 taatctccag gctgtgaggt caagggtggg gaagcccatg gctggggatt ccccatctcc
     1321 ccagtttcac ttctgctcct aacctgggtc agttcattct gccaggacac tgatgacctg
     1381 taacagttct cacccctatt gggtgaggtg atcaccggga accaatcagc gtcggcgcgg
     1441 gagcgggttg taaagtccac gctgcccaca ggagtcagtc gacctgaatc cccgagagga
     1501 gcaatggctc taacaacgct gctcttgctg gtggcggccg ccctgaccct gatcgagacc
     1561 cgcgcgggcc cacactcgct gcggtatttc cacactgctg tgtcctggcc cggcctcgtg
     1621 gagccccggt tcattatcgt cggctacgtg gacgacacgc agttcgtgcg cttcgacagc
     1681 gacgcggaaa atccgaggat ggagccgcgg gcgcggtgga tggagcagga ggggccggag
     1741 tattgggagc gggagacaca gaaagccaag ggccatgagg agagtttccg agtgagcctg
     1801 aggaccgcac agagatacta caaccagagc aagggcggct ctcacacact ccagtggatg
     1861 tatggctgtg acgtggggtc cgacgagcgc ctcctccgcg ggtacctgca gttcgcctat
     1921 gaaggccgcg attacatcgc cctgaacgaa gacctgaaaa cctggacggc ggcggacatg
     1981 gctgcacaga tcaccctaca caagtgggag caggctggta ttgcagagag agaccgggcc
     2041 tacctggagg gcgcttgcgt gcagtcgctc cgcagatacc tgcagctccg gaaggagacg
     2101 ctgctgtgca cagatccccc aaaggcacat gtgacccatc accccaggtc ttatggtgct
     2161 gtcaccctga ggtgctgggc cctgggcttc taccctgctg acatcaccct gacttggcag
     2221 ttgaatgggg aggagctgac ccaggacatg gagcttgtgg agaccaggcc tgcaggggat
     2281 ggaaccttcc agaagtgggc atctgtggtg gtgcctcttg ggaaggagca gaattacaca
     2341 tgccatgtga accatgaggg gctgcctgag cctctcaccc tgagatggga gcctcctcca
     2401 tccactgtct ccaacatggc gaacgtagct attctggttg tccttngtag cttggccatc
     2461 attggagctg tggtggattt tgtgatgaag agaaggagac acacaggtgg acaaggaggg
     2521 gactatgctc tggctccaga gaacagtgtc tgatgttccc tgtgagccta tgggctcaat
     2581 gtgaagaatt gtggagccca gccttcgcct acacaccagg accctgtctc tgcattgccc
     2641 tgtgttccct tccaccgcca accttcctgg tctgcagtgg aaactaaggg ttctttggaa
     2701 agtcggttgg atggcgttgt gctggggcaa acacatgaag gagtgtttcc ttaaagtgga
     2761 tacaggtgtg aaatcctaag gccgactcct gaaggaacat ttcactgaag cagacacagg
     2821 agagaggatg ttctgttaaa caagcatgtg aaaggatgcg tgatgaagga ttctttgcta
     2881 aagacacact tatattggtc tgccttacat tgtgtagtgg agctgcattg gtcggggcgc
     2941 catagagaga aacgcaccca aaaattctga tagtattctg cagttgatgc ttccaaggac
     3001 atgagcttat tggatgcctg tgctgaggca agacgcttgg aggacacatg atgactggag
     3061 agtataaata ggactccatg gagtgactga gacagagttt gccttgctgg tacagtgtgt
     3121 gtcttgtgtc ttcactgttc ttcacttcca taagagaggt acagcaaaga acttctcctg
     3181 gtattcctgc tggtccttcc tgctggccct agctgaggcc tggctgtctc tgctaggtcc
     3241 tatcacttct gttgctaacc tgactctact gaactgaaca actgctatat ccctgaggtg
     3301 ttttcaagtg gatggagctg ccactgctga cctgtgaatt gaactgccaa cgtccagaca
     3361 actcacatga gag
//
