LOCUS       XM_006523692            2075 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus histocompatibility 2, Q region locus 1
            (H2-Q1), transcript variant X10, mRNA.
ACCESSION   XM_006523692
VERSION     XM_006523692.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006523692.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..2075
                     /gene="H2-Q1"
                     /gene_synonym="15006; H-2Q1; H2-D1; Q1; Q1b; Q1d; Q1k;
                     Qa-1; Qa1; Qed-1"
                     /note="histocompatibility 2, Q region locus 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 4 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:15006"
                     /db_xref="MGI:MGI:95928"
     CDS             11..1066
                     /gene="H2-Q1"
                     /gene_synonym="15006; H-2Q1; H2-D1; Q1; Q1b; Q1d; Q1k;
                     Qa-1; Qa1; Qed-1"
                     /codon_start=1
                     /product="histocompatibility 2, Q region locus 1 isoform
                     X10"
                     /protein_id="XP_006523755.1"
                     /db_xref="GeneID:15006"
                     /db_xref="MGI:MGI:95928"
                     /translation="MPCIPDGAMALGRLLLLLAAALTLTKTGAGECGVRRETGSEKRV
                     AAGTWDAASPRRPPDPPPLLHPRPAPCSPLGPRTAGSLGRRSEFHRAPPPGSHSLRYF
                     ETSVSRPGFGKPRFISVGYVDDTQFVRFDSDAKNPRYEPRAPWMEQEGPEYWERNTRR
                     VKGSEKRFQESLSTLLSYYNQSKGDPPKAHVTHHPRSQGDVTLRCWALGFYPADITLT
                     WQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCHVYHEGLPEPLTLRW
                     EPPPYTVSNMVIIAVLVVLGAVIVIGAVVIIGVMVSFVMKRRRNKGRDSAQSSDISLL
                     DCKGDTLVPDWGGAMCI"
ORIGIN      
        1 agggcctcag atgccctgta ttccagatgg ggcaatggca ctgggaaggc tgctcctgct
       61 gctggcagcc gccctgaccc tgaccaaaac cggagcgggt gagtgcgggg tccgaagaga
      121 aacgggctct gagaagaggg tcgcggccgg cacctgggat gctgcgtccc cgcgtcgccc
      181 accagaccct ccgccccttc tccacccacg tcccgcgccc tgctcccctc tcggaccacg
      241 gaccgccggg agtctcggga ggaggtccga gtttcaccgc gcgccgcccc caggctcaca
      301 ctcgctgcgg tatttcgaga cctcggtgtc ccggcccggc ttcgggaagc cccggttcat
      361 ctctgtcggc tacgtggacg acacgcagtt tgtgcgcttc gacagcgacg cgaagaatcc
      421 gagatatgag ccgcgggcgc cgtggatgga gcaggagggg ccggagtatt gggaacggaa
      481 cacacggaga gtcaagggca gtgagaagag attccaagag agcctgagca ccctgctcag
      541 ctactacaac cagagcaagg gcgacccccc aaaggcacat gtgactcatc accccagatc
      601 tcaaggtgat gtcaccctga ggtgctgggc cctgggcttc taccctgctg acatcaccct
      661 gacctggcag ttgaatgggg aggagctgac ccaggacatg gagcttgtgg agaccaggcc
      721 tgcaggggat ggaaccttcc agaagtgggc atctgtggtg gtgcctcttg ggaaggagca
      781 gaattacaca tgccatgtgt accatgaggg gctgcctgag cccctcaccc tgagatggga
      841 gcctcctcca tacactgttt ccaacatggt aatcatagct gttctggttg tccttggagc
      901 tgtgatagtc attggagctg tggtcatcat tggagttatg gtgtcttttg tgatgaagag
      961 gaggagaaac aaaggcaggg acagcgccca gagctctgat atctctctcc tagattgtaa
     1021 aggtgacact ctggtgcctg attggggagg ggcaatgtgc atatgattgg gtttcaggga
     1081 ctcccagaat cctgtgagtg gtgggttgtt gggatgttgt cttcacagtg atggttcatg
     1141 actctctttc tctagcatga agacagctgc ctggagtaga ctgagtgata gccagtgtgt
     1201 tcaggtctct cctgtgacat caagagtctt tagacatcag ctttctttag aaaatggtgt
     1261 ctcatgttct ctgccacacc aaccccagta gcagccatgt gacaagttgc acagactgag
     1321 gtatacttca aaagaaggag gcctcctgga accagttgtg gaactcttgg ccagagtatt
     1381 atattgagtc ttagttctca tggcaattga tttattttgt tttctcttat tccttttctt
     1441 atttacatgt tcctcgtaac ctaggctaag atctcatgtg aaagtaatgg gttagaaacc
     1501 atccctagaa ttggggtcac taacatgacc ttatctgggg aaaccaacgc tttactttag
     1561 aaattattta caaaattata taatagtatt acacagataa aaacttttcc aacaataaaa
     1621 tttcatgtgg ctacatgtgt gttatcggag gtgggctttg gcatgtggta aagaaagtct
     1681 taaataaaaa gaattaacat agtttaaatt taagcactga aaaaaatcag gcattagatg
     1741 ttaaataata attgaccata aagatttatt aacatgtctt gaacatatgc cagtagcctt
     1801 ggatgactgc cccacaactt atattctttt agagttgtta tacttcaatc atttctactc
     1861 ttcatgatgt cacctgttct gtttgtgatt cactgaacac atctttacag agttgtaatg
     1921 tttgcctgat ttttgtgctt tcctgtgcca aatgataatg atggtatttg tgattgcttc
     1981 actggacaca tcttcaaagt gttgtaatat ttgctctttt aatgtttaaa aacccctgct
     2041 tgagagctgc aaaatacact cggattcata ctgcc
//
