LOCUS       NM_008205               1029 bp    mRNA    linear   ROD 09-DEC-2020
DEFINITION  Mus musculus histocompatibility 2, M region locus 9 (H2-M9),
            transcript variant 2, mRNA.
ACCESSION   NM_008205
VERSION     NM_008205.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ishii T, Hirota J and Mombaerts P.
  TITLE     Combinatorial coexpression of neural and immune multigene families
            in mouse vomeronasal sensory neurons
  JOURNAL   Curr Biol 13 (5), 394-400 (2003)
   PUBMED   12620187
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Lemon WJ, Bernert H, Sun H, Wang Y and You M.
  TITLE     Identification of candidate lung cancer susceptibility genes in
            mouse using oligonucleotide arrays
  JOURNAL   J Med Genet 39 (9), 644-655 (2002)
   PUBMED   12205107
REFERENCE   3  (bases 1 to 1029)
  AUTHORS   Arepalli SR, Jones EP, Howcroft TK, Carlo I, Wang C, Lindahl KF,
            Singer DS and Rudikoff S.
  TITLE     Characterization of two class I genes from the H2-M region:
            evidence for a new subfamily
  JOURNAL   Immunogenetics 47 (3), 264-271 (1998)
   PUBMED   9435345
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF016308.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF469488.1, BC106996.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="BALB/c"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 19.16 cM"
     gene            1..1029
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /note="histocompatibility 2, M region locus 9"
                     /db_xref="GeneID:14997"
                     /db_xref="MGI:MGI:1276570"
     CDS             1..1029
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2"
                     /codon_start=1
                     /product="histocompatibility 2, M region locus 9 isoform 2
                     precursor"
                     /protein_id="NP_032231.1"
                     /db_xref="CCDS:CCDS28724.1"
                     /db_xref="GeneID:14997"
                     /db_xref="MGI:MGI:1276570"
                     /translation="MKNFESQPLLLLFMVTLVIAKHPNGSHTLRFVSTFLSWPRHLEL
                     QFIFLIYVDETQIMGFNSISESQRMESRVPWLNELNAEFWELATQDVLKEKSFVTGIM
                     NKLLHIYNDSMTGYHIIQETYGCQVKQRTYFSHAFMELLFDTHDYITLNEDLQTWRAV
                     GKAAEIVKEEWEKINLVKSSKSFLLGACVEGLLQYLNFGKKYLLRTDTPKIHMTYKIR
                     PDRKITLRCWAFNFYPPEITLTWQRDGSNQTQDMEVIEIRPSGDGTFQKWAAVVVSSG
                     EEHRYTCHVNHEGLSEPVTLRWDPPEPTIPFLPMIIALVLGALLMGSVMTFLIWKRRT
                     RGKKGSWS"
     exon            1..73
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /inference="alignment:Splign:2.1.0"
     exon            74..343
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /inference="alignment:Splign:2.1.0"
     exon            344..619
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /inference="alignment:Splign:2.1.0"
     exon            620..895
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /inference="alignment:Splign:2.1.0"
     exon            896..1029
                     /gene="H2-M9"
                     /gene_synonym="M9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaact ttgaatccca gcctctcctc ctgctgttca tggtcacctt ggtcatcgca
       61 aagcatccaa atggttcaca cactctgaga tttgtgtcca ccttcttatc atggcctcga
      121 catctggagc tgcagtttat ctttctcatc tatgtggatg aaacacagat catgggattc
      181 aacagtatat cagagagtca gaggatggag agtcgggtac catggttgaa tgagctaaat
      241 gcagagtttt gggagttggc aacacaggat gtcctgaaag aaaaaagctt cgtgacagga
      301 attatgaaca aattgctcca catctataat gatagcatga ctggatatca cataatccag
      361 gaaacatatg gctgccaagt caagcagaga acgtacttca gtcacgcctt catggaatta
      421 ttattcgata cacatgatta catcacactg aatgaggatc tgcaaacatg gagagcggtt
      481 ggcaaggcag ctgagatagt taaggaagag tgggagaaaa taaatcttgt aaagtcgtca
      541 aagtctttcc tgctgggtgc atgtgtggag gggctccttc aatacctgaa ctttgggaag
      601 aagtatttgc tgagaacaga cacccctaaa atacacatga cctataagat cagaccagat
      661 aggaaaatca ccctgaggtg ctgggccttc aacttctacc cacctgaaat caccctaacc
      721 tggcagaggg atggaagcaa ccagacccag gacatggagg tgatagagat caggccttct
      781 ggtgatggaa cttttcagaa atgggcagct gtggtggtct cttctggaga agagcataga
      841 tacacatgcc atgtaaatca tgaggggcta tctgagcctg tcaccctgag atgggatcct
      901 cctgaaccca ccatcccctt cctgcctatg attattgctc tggttcttgg ggctctgctt
      961 atgggatcag tgatgacttt tcttatatgg aagagaagga ctagaggtaa gaaagggtca
     1021 tggtcttaa
//
