LOCUS       NM_013544               1399 bp    mRNA    linear   ROD 29-MAR-2020
DEFINITION  Mus musculus histocompatibility 2, M region locus 10.1 (H2-M10.1),
            transcript variant 1, mRNA.
ACCESSION   NM_013544
VERSION     NM_013544.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Loconto J, Papes F, Chang E, Stowers L, Jones EP, Takada T,
            Kumanovics A, Fischer Lindahl K and Dulac C.
  TITLE     Functional expression of murine V2R pheromone receptors involves
            selective association with the M10 and M1 families of MHC class Ib
            molecules
  JOURNAL   Cell 112 (5), 607-618 (2003)
   PUBMED   12628182
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Ishii T, Hirota J and Mombaerts P.
  TITLE     Combinatorial coexpression of neural and immune multigene families
            in mouse vomeronasal sensory neurons
  JOURNAL   Curr. Biol. 13 (5), 394-400 (2003)
   PUBMED   12620187
REFERENCE   3  (bases 1 to 1399)
  AUTHORS   Arepalli SR, Jones EP, Howcroft TK, Carlo I, Wang C, Lindahl KF,
            Singer DS and Rudikoff S.
  TITLE     Characterization of two class I genes from the H2-M region:
            evidence for a new subfamily
  JOURNAL   Immunogenetics 47 (3), 264-271 (1998)
   PUBMED   9435345
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF539597.1 and AY211079.1.
            
            On Jul 8, 2011 this sequence version replaced NM_013544.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY211079.1, BC104321.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               AF539597.1         1-150
            151-1399            AY211079.1         151-1399
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 19.01 cM"
     gene            1..1399
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /note="histocompatibility 2, M region locus 10.1"
                     /db_xref="GeneID:14985"
                     /db_xref="MGI:MGI:1276522"
     CDS             1..996
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1"
                     /codon_start=1
                     /product="histocompatibility 2, M region locus 10.1
                     isoform 1 precursor"
                     /protein_id="NP_038572.3"
                     /db_xref="CCDS:CCDS28721.1"
                     /db_xref="GeneID:14985"
                     /db_xref="MGI:MGI:1276522"
                     /translation="MRNTGPCTLLLLLMVALDLNHYCAGSHWLQTFNIVILEPGMLEP
                     RFIQVSYVDSIQYQGFDSKDPSAGMQPRAAWIELEPPEYWEKETSRVLELSQVERQVL
                     RLMVKKNGHKMDGYHTLQEVYGCNVANDGSFLGGHYRLTYYGYDYLTLNEDLSSWTAE
                     GKGAQHAKSRWEDAGEAKRRKTYLQGECVQRLLRYLDLGKETLLCSDAPQTHVTHHVR
                     PEGNVTLRCWALGFYPADITMTWKRDGNNLTQDMELPDTRPAGDGTFQKWAAVVVPSG
                     EELRYTCHVHHEGLPEPLTLKWEPPHTIPIIAILIGLVLGTLVVGTVVIFLVWRK"
     exon            1..73
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /inference="alignment:Splign:2.1.0"
     exon            74..343
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /inference="alignment:Splign:2.1.0"
     exon            344..619
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /inference="alignment:Splign:2.1.0"
     exon            620..895
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /inference="alignment:Splign:2.1.0"
     exon            896..998
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1387
                     /gene="H2-M10.1"
                     /gene_synonym="9.5H"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggaaca ctggaccctg cacactcctg ctcctcctga tggtggcctt ggacctgaac
       61 cactattgtg caggatcaca ctggctgcag actttcaaca ttgtaatttt ggagcctggc
      121 atgttggagc cccggttcat ccaggtcagc tatgtagact ccatacagta tcagggattt
      181 gacagcaaag acccatctgc agggatgcaa cctcgagctg catggataga gctggagcca
      241 cctgaatatt gggaaaagga gacatcaaga gttctggaat tgtcacaggt agagagacaa
      301 gttcttcggt taatggtgaa aaaaaatgga cacaaaatgg atggttatca caccctgcag
      361 gaagtatatg gctgcaatgt ggctaatgat gggagcttcc tcggcggtca ctaccgactc
      421 acctactatg gctatgatta cttaacccta aatgaggacc tgagctcttg gactgcagag
      481 ggcaagggag ctcaacacgc gaagagcagg tgggaggatg caggtgaagc aaaacggagg
      541 aagacttacc tgcaagggga gtgtgtacaa aggcttctta gatacctgga ccttggaaag
      601 gagaccttgc tgtgctctga tgccccccaa acacatgtga cccaccatgt aagacctgaa
      661 gggaatgtca ccctgaggtg ctgggccttg ggcttctacc cagctgacat caccatgacc
      721 tggaagaggg atgggaacaa cctcacccag gacatggagc tgccagacac caggcctgca
      781 ggggatggaa ctttccagaa gtgggcagct gtggtggttc cctctggaga agagctaaga
      841 tacacatgtc atgtgcacca tgaagggtta cctgagcctc tcactctaaa atgggagcct
      901 ccacacacca tccccatcat agcaattctc atcggcctgg ttcttggaac cttggtggtg
      961 ggaactgtgg tgatttttct ggtgtggagg aaataaagag tgagatacaa accttctgtg
     1021 acttcaaaaa ctcctggctt ttctttcaat ggctgacacc tatgtccatg tgtctgtatc
     1081 ctgtcaaaaa gagacaggtc tgggagacct ccagcaaaaa ctgaccttta gtttacagta
     1141 agctgtacat ttattctgtc atctttaaca tgaggatttg ggtaattttt taatgtatga
     1201 ctttttccta tagtttattt aatgagtaaa cccaatcaaa gcaagatgaa ttaaatagaa
     1261 actctgtctt caggagttga aattcattat ttgggtcttc tctgactttt tctgagtgct
     1321 tttctttctc ttcaacttca tatttctctg ttaatgtctc ttcctaataa acctgaactt
     1381 tgattcaaaa aaaaaaaaa
//
