LOCUS       NM_001357006            6546 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus glucoside xylosyltransferase 1 (Gxylt1), transcript
            variant 3, mRNA.
ACCESSION   NM_001357006 XM_006520849
VERSION     NM_001357006.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6546)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC127360.3.
            
            On Oct 14, 2017 this sequence version replaced XM_006520849.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC141302.1, SRR11927936.2544106.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164140 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-304               AC127360.3         85958-86261         c
            305-476             AC127360.3         72829-73000         c
            477-602             AC127360.3         70147-70272         c
            603-854             AC127360.3         65383-65634         c
            855-978             AC127360.3         59441-59564         c
            979-1151            AC127360.3         58941-59113         c
            1152-6546           AC127360.3         50817-56211         c
FEATURES             Location/Qualifiers
     source          1..6546
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 47.34 cM"
     gene            1..6546
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /note="glucoside xylosyltransferase 1"
                     /db_xref="GeneID:223827"
                     /db_xref="MGI:MGI:2684933"
     exon            1..304
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     exon            305..476
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     exon            477..602
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     exon            603..854
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     exon            855..978
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1151
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     exon            1152..6546
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6522..6527
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /note="hexamer: AATAAA"
     polyA_site      6544
                     /gene="Gxylt1"
                     /gene_synonym="Glt8d3; Gm1228; Gm87"
                     /note="major polyA site"
ORIGIN      
        1 cgcgttgcga ttcttcgtag ttcgcccggg cgggcgcggc ggcggcggcg gtgacggcgg
       61 tgacggcggc agcggcggtg gcggcagcgc gggccgggat gcggcgctac ctgcgggtcg
      121 tagggctgtg cctggcctgc ggcttctgct cgctgctgta cgccttcagc cagctcgcgg
      181 tgtccttgga ggaaggagct gccgggggcc gcaggccgca ggccgcggta gtttcctggc
      241 tggcggacgg tggacgcggc acggggagag gcgcgggcag cgcgggcccg ggccggacgg
      301 gcaggtatga tatgaaaaca aggcccgatg agaaaatgca ccttgctgtt gttgcctgtg
      361 gtgagagact ggaagaaact gtgactatgt tgaagtcagc tctgattttc agcatcaagc
      421 cactgcacgt ccacatcttt gctgaagacc aactgcacga tagctttaaa gacagacttg
      481 ccagctggtc cttcctgcgg agatttgact acagcctgta ccctatcacc ttcccaggtg
      541 acagcgccgc ggactggaag aagctcttta agccctgtgc gtcccagagg ctgttcttgc
      601 cattaatact gaaagaagtt gactcactgt tgtatgtgga cactgatatc ctttttttac
      661 gacctgttga tgatatttgg tcattactaa agaaatttaa ttccacacaa attgctgcga
      721 tggcaccaga acacgaggag cccagaattg gatggtataa tcgctttgcc cggcacccgt
      781 actatgggag gacgggcgtg aactctggag tgatgctgat gaacatgacc cggatgagga
      841 ggaagtactt caagaatgat atgacaactg cgcggctaca atggggggac atacttatgc
      901 cactgcttaa aaagtacaaa ctgaacatca cgtggggcga tcaggatctg ttaaatatcg
      961 tgttttccca caatccagaa agcctctttg tttttccatg tcaatggaat taccgaccag
     1021 atcactgtat atatgggagc aactgccgag aagcagaaga agaaggagtc ttcattcttc
     1081 atggaaacag aggtgtttac catgacgaca agcagccagc attcagagct gtgtatgaag
     1141 cactaagaaa ttgctctctt gaggatgatt ccgtccgttc cttactaaaa cctttagagc
     1201 tggagctgca gaagacagtt cacacatact gtggaaaaac gtacaaaata tttatcaagc
     1261 agttgacaaa aagcataaga aaccgttatg acacgccacc gaaggaaagg tgattcttca
     1321 tgaccgaagg aaatggatga gacaagcaac gcctcaggag atgtgaagga atagactgga
     1381 aaaggattta gggaggcatt tctgtctcca caataattct ctttggaaga attaaagagc
     1441 agtatattca tgtcatgaag agtaagttga actcttgtgc tccagggaga agacagtcgg
     1501 atctctggta ttttgtaacg ttacttggtg tcattccagc agtagtgaaa gcattggaca
     1561 gtgtgggctg tgagctgggt tggctcgtaa tcaagtaagg aaggcctggg agggtggatg
     1621 gagacaatgt acctcgacgt ggtggagact caagctgtga gtttagcaat aactatgtca
     1681 gcactaacct cactttacag tgggagaaaa cgtttacagg agcagaaagg ttctgtttct
     1741 taagaaatgt gatgtaacca atgtaaccat tgacaatcta tgtacccgca tacatttcat
     1801 ctctgctcta cgatatttgg tgacaatcat gtttgagatt atttgtagat tttaagtaag
     1861 ctgcacattt aaaaattacc tgtatgagaa aggaggaaat agtgaaaact taaaggaggc
     1921 attgtgtgtg tgtatgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtatgag tgtgtgtgtg
     1981 tgtgagagtg agtgcgtgcg tgtgtgtgtg tgtgtgtgtg ttgacaaatg aagtgtgttc
     2041 attttgtatg tattaaattg tcttgccaaa cctaagctct aagatatttg gggacatttt
     2101 aaaaaatcac tttaagtgag aaatttcagc tttactgggc attctggaag caaaatatat
     2161 tatgctgaga ataaagtaag aatctaatcg caacactaaa aggactgtgg aaaatgcaac
     2221 ggaccaaata cataagcctg tgaggttaac agtggtccat tcagacttcc cttctacctc
     2281 aagtgcattt ccaggatcct tttgaagaga aaattcagag ccttacttta gattagacag
     2341 atgtggtggc tggtttggag ggagaagatt tttatatcta gctgtagaaa aagttttgat
     2401 ttgggtaaat gtgcatttct tattttgaac accattgaag acaattgcct tgttaaactc
     2461 tggaagagtg ctccttgctc gtgttgcctt gacacctcac ggactctgag cgggcagcat
     2521 gtgctgtcct ggggcacgtg atctcacgta ctggggctca tgtttcttcc taccaggtgc
     2581 tcctgagtcc tggtctgtct tctttttctc tcggattttt aaaccgtaca tgaagaaagg
     2641 gaagttatga aggaacagta tcggttgtga tggtcctgta tcctctggga atattcggaa
     2701 gacgggatca gtacagttgt tccagcttct gtagttcacc agagacagac tgagaaggtc
     2761 taaaatacca tcaaaaggat ctgcgcccag gggaggaatt gttaactagc tcagtactca
     2821 gacaggttga gggagcagca gccagggttc cttggcagaa cgccatcgta aaggcagccc
     2881 ctgtggacgg tgtgcagtgt agctcgttag gggggaccgt gagggggaac cttatccgtt
     2941 ggctgacgtg atatgagaga acttgccaaa gtcagctgtc ctgcatctcc tacacctagg
     3001 aaggagtctt taagacaatt tttaaatgaa gagattaaaa acttacatca aagtagagta
     3061 gggctatacc tcaatattca gagtgcttgc tttatgtggt cagggcccgg cagtacagaa
     3121 aataatggaa gatgagaaga ggtaagagcc tcgtgcagcg gctctcactg gtcagtctgt
     3181 cacccgtcag ggtcttgcta catttacttc atttattcct ttcttatgtt aaagtctccg
     3241 gcaggcatcg ttctgtgtcc ctgcagtgag tgctttggta cttacaagtg actagagcaa
     3301 ctatatcatc cccagcaaga gcagcagctg gcctttggtt ccagctcctc cccagtcctt
     3361 aacccatttc cctgcgtgtc ttagctacgc atgggacatg gtgattctgc tttaaatgag
     3421 ttcctcagaa ggatccgata tcagctagtt taggaagcat ggaaattatt acgctatctt
     3481 taaggtggaa gttaggatgt cacagttatt ggcacaattg ctaaattgta agtgctgttt
     3541 tggatagagg aagcagtggg gtttttgaca gagggattca tatgagtaag tcccttcaga
     3601 tgccattttc tcagtagctg aagactcagc cccacgtgtt ccactgtgat tgactgaggc
     3661 tgtttaaaga aaggatttga aaatgcacca aacttcattt gtatgaaaag agtttggaaa
     3721 aactctagaa agtgttttaa gaaaatgcag ttttccttca tgaagacgtg ctcatgacct
     3781 acgccacgcc tgtcagtgta atgaggagaa cagatgggga ctggcatgga ctcccctctt
     3841 tgtgggcttg ggaggtgtgc tgactgcagt gccaaagagg tgaggcctgg aaggggtgac
     3901 tggaggaacg cgtggagctc ctcagccatg ccagtgttga tggagcccgg ttttaccgca
     3961 cacgggctcc cccgaggctg ggagcattct ggtttctccg gtgtagattt gttgatggta
     4021 tgtgggagga acagatgcca aggaagagga agtagagaag aaaaggaaga tggaaatgag
     4081 tagtcaagga agagggaaag agagagaggg ttaagagaat ggcggaaggc agagtgagag
     4141 gaagatggaa ggatagtggg gagacaggtg cacgtggagg aaactgcgga aacatggggt
     4201 cccctgccta ggtcagtgct cgctgtgcac tgccagaacc agccttgtat gagccatcga
     4261 tgctaggcat gtttcttggt caccttgttc actggtcctt tagtggtagt tgtctttttt
     4321 ttttctttcc ctgtggaaac acatattttc cattttaatg tcctttagag gaggtctgtg
     4381 aagggaactg cattgaaatg tctaaatcgc ccactggttt tccctagcat gataatgaga
     4441 ggccagtctg gccatttgtt tgtttgtctg tttgttgttt ttaagtctaa aagatatttc
     4501 cagcttttat atgaatatct cctctcaggg agtactgaaa tgttataaaa taatccttag
     4561 cttgtggcgt gacctggaat ggtggctggg acaagggtta cgtctgcttt ttcctcagcg
     4621 gggatacttt cagctgaacc gttttcagtg gactcaagag gacgggagac ggtagacata
     4681 gtaaaagaaa aaccttaaag aatcgtcact gtcagacaga gtggcgcagt cattaccagc
     4741 acttggtgcc agcacccaca tggtggtcca cagctctctg taactccagt gccaagggat
     4801 ccaacacact cttctaacct ctgtggacac cagacacagg tggtgcacat aactccacac
     4861 aggcaacaca tatatataac ctaaaagcag taaaaaatac tcagtgccct cttcagttgc
     4921 ttgtagtaaa tagcacaagc acagccaacc tctttgagat gtttttagaa agatggttga
     4981 gctgtctttt caaaaatgtt tttggttttt tggaataaag aagaaaaata gagtgtgcaa
     5041 tatgtcaaat gtggggccag ttatccattt attaagtata atttcaagtg tcttaaagta
     5101 ataatcgcct tactgcattt taatattcaa tggaggtaga ccaaggtgac tggttttaca
     5161 gtagtcatct ttttctacat tgctaaagca gcccttcttt cttctaaagc ttgctaactt
     5221 gttctaatgt ttcttacttt tttaattcat tgaagataaa attaaaaaac aaaacaaaac
     5281 cctgagttat atagatttaa gacagctgtc taaaagctgt tgttaataag gatcaaaact
     5341 gggcatggtg gcacgtgacc tgtcacccaa tacttgggaa cctgaggtac atgcaaggcc
     5401 aatgtggcct ttgctgagat cttgtctcaa aaagcaaaat aaaaacaaac aaaaaaaacc
     5461 ccaaaacccc ccaaaaacaa aaaacgcctc taaaagtgtg tgttaaatca aatatgtagt
     5521 acttagagaa tcatgagata atgtgtaatt gtatattggc ccgggcaatc tacagttgat
     5581 tacataccag tgtccggttt acttttgaaa acttgtcacc tcatcctggc taacaagtat
     5641 ctcctgggat ttccttaaac ttttctataa atttacgttt caaacagtca ggagctttgt
     5701 agggagtgtc tctcaataat actgtgaaca ccagatattt tactatcaaa cttgagcact
     5761 gattgcgacc tttgacctgt ggagattaca tatgcagtca gactattaga gcgtcttcac
     5821 acagcagacc gtgaccgctt cttctaaaag ttgattaaga gatcgcaaca gcctatatgc
     5881 catttgaaaa gtaaactgtc tcactgtggt agttcagtag ggatacttct atttgaactg
     5941 ttacaagtgg gtttttttaa taattaaaaa acctataata gctattttca gcttttgtat
     6001 aaaatctctt cagggaatac tgaaatgtta taaaacaatc cacagcgtgt ggtcttgttc
     6061 tggaccgtgc ctattcggaa ttgagcagag catgcctttg ttacatgagc tcccaccgat
     6121 acgtgagagc tgggagggag ggattctgtg agctctggag cagggcagag agatggaaat
     6181 gagaacccgg aacagtgcaa gggttccctt ctgccaagca gtttgcttgg gtctgttgct
     6241 gtgctgagcg cagttgtctg aagctgcagg aagacgtcat gatgaaccat gctgtgtaga
     6301 cattactgcc tcgaaactgc ttttacctta aaacgatttt ggtttgctat aatgtgaata
     6361 tcttttaagt cacttgtgta tcttgagaac tcgtaacggg gagtgtagaa gtgtagactt
     6421 ggggtctagc ttaccagtat tggaagatgc cttgttccgt tctggaggtt cagctcaggt
     6481 gtttcgtgag aaactgtatt gctgttacta aatatgtact caataaatgt tggatttcct
     6541 catgtg
//
