LOCUS       NM_175133               2985 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus guanylyl cyclase domain containing 1 (Gucd1),
            transcript variant 1, mRNA.
ACCESSION   NM_175133 XM_483920 XM_489734 XM_909157 XM_982434
VERSION     NM_175133.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Endoh-Yamagami,S., Karkar,K.M., May,S.R., Cobos,I., Thwin,M.T.,
            Long,J.E., Ashique,A.M., Zarbalis,K., Rubenstein,J.L. and
            Peterson,A.S.
  TITLE     A mutation in the pericentrin gene causes abnormal interneuron
            migration to the olfactory bulb in mice
  JOURNAL   Dev Biol 340 (1), 41-53 (2010)
   PUBMED   20096683
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC144461.33, AK040832.1, AK034509.1 and BE952992.1.
            
            On Nov 18, 2016 this sequence version replaced NM_175133.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC043463.1, AK157404.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-108               AC144461.33        130688-130795       c
            109-176             AK040832.1         2-69
            177-2827            AK034509.1         2-2652
            2828-2985           BE952992.1         1-158               c
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 38.53 cM"
     gene            1..2985
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /note="guanylyl cyclase domain containing 1"
                     /db_xref="GeneID:68778"
                     /db_xref="MGI:MGI:1916028"
     exon            1..228
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             186..905
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     guanylyl cyclase domain-containing protein 1; protein
                     GUCD1"
                     /codon_start=1
                     /product="protein GUCD1 isoform 1"
                     /protein_id="NP_780342.1"
                     /db_xref="CCDS:CCDS35936.1"
                     /db_xref="GeneID:68778"
                     /db_xref="MGI:MGI:1916028"
                     /translation="MRTEAEAAGQPLEPGDFVQLPVPIIQQLYHWDCGLACSRMVLRY
                     LGQLDDGEFENALQELQLTRSIWTIDLAYLMRHFGVRHRFCTQTLGVDKGYKNQSFYR
                     KHFDTEETRVNQLFAQAKACKVQVEKCTVSVQDIQVHLAQGHVAIVLVNSGVLHCDLC
                     SSPVKYCCFTPSGHRCFCRTPDYQGHFIVLRGYNRATGCIFYNNPAYADRMCSTSISN
                     FEEARTSYGTDEDILFVYLDS"
     exon            229..313
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            314..479
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            480..571
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            572..813
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            814..2969
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2943..2948
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2961
                     /gene="Gucd1"
                     /gene_synonym="1110038D17Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggattaggcg tggcttgagg cggcctagcc accgcctacc cggctctgaa ccgcggtggc
       61 ggcggcggcg gcggaggcgg aggaggagga actctgcgct cactggccgc gctcgctgcc
      121 cagcagaagt cgccgctgca atcagctcca ggccggggcc atgggcgccc tgcgccatcc
      181 gggtcatgag gacggaggca gaggcagcgg ggcagccgct cgagcccggg gactttgtgc
      241 agctgcctgt gcctatcatc cagcagctat atcactggga ctgtggcctg gcctgctcca
      301 ggatggtgct tcggtacctg ggccagctcg acgacgggga gtttgaaaac gccctgcagg
      361 agctgcagct gaccaggagc atctggacca tcgacctggc ctacctgatg cgccactttg
      421 gtgtgagaca ccgcttctgt acccagactc tgggtgttga caagggttac aaaaaccagt
      481 ccttctacag gaagcacttt gacacagagg agacccgagt gaaccagctg tttgcacagg
      541 ccaaggcctg caaggtgcaa gtggagaaat gcacagtgag tgtgcaggac atccaagtac
      601 acctggcgca gggccatgtg gccattgtgt tggtgaattc cggggtgcta cactgcgacc
      661 tgtgctccag ccctgtcaag tactgctgct ttactcccag tggccaccgc tgcttctgcc
      721 gcacccccga ctaccaaggc cacttcatcg tcctgcgtgg ctataacagg gctaccggct
      781 gcatcttcta taacaaccca gcctatgctg accggatgtg cagcaccagc atcagtaact
      841 ttgaggaggc cagaactagc tacggcacag atgaggacat cctctttgtc tacctggaca
      901 gctgacagca ggagcctggc atgccaggtc ctcagaccct atgttctatc tcagccaggc
      961 ccactcagga tgcccatgcc cagggcagca ggcttctggg gttcagaatt gtagcctcag
     1021 cctgtttgac aaaggtcttg ggaactctgt gactgctttg cccaccagtg tcatcatgtc
     1081 atttgcccta aacaccttgt agttgctgaa gacaactcaa gagcatctaa ggggagtatc
     1141 tctcacgacc ctaaattctg cctccagctg tgcccagtga aagacctcaa gtctgcctcc
     1201 agccatgccc aaggcaggaa ccctggaaga gaagcgcaca tttgggaaga gcacatgcag
     1261 atccaggcct gtggctcggc cccgctcagc cccatagtgg gtggcagcag tgctctctcc
     1321 tgcctcctgc ggactcaggt ctctggggct gctcactagg ccttgtaatc acacagcaca
     1381 agcatacctc acagccaccc tgaggctctc tgaccctggg atgctgaggc cttcttagcc
     1441 tctaggtaca gtctgtagga tggaaagctt ttaggagtgg gcagggccga atggatggga
     1501 gcggaagaga atgtcttagg aacaaggagt tgacaagaga ctccccagag agtccttgcg
     1561 tccacaaggc ctcctgatac cagcttggct tcccacagca agctctaact ctgagagcct
     1621 tttgaggatg ggtgctagag ggcccgtgcc cctaaaacag caggcagctt cccccccacc
     1681 ctggtgtgca caccaggagt gtttgcacag aatactgggt gtcttctgtc ttgaagaaag
     1741 gcagtgtccc cgagtcacac agcacagcag gtagcatcaa ctagagctag ttaatgtgtg
     1801 ttgttttgct cttgggatcg agacttcagt ttccaatgtg tggggagtca gaccagaata
     1861 gatacaggta ctttgaaacc actaaccctt ctttacacgg ggcacatagg ccagtccgag
     1921 ttctttctta acaagatggc tgttctggcc tggccagcag tctgcatgct gaagctgcac
     1981 caaagacaag cgaatgggtc atttctaaag agaccaggga gcccactcct catgggctct
     2041 ccgtggtgaa gaacaaaggg taccccaatg gcctctcacc atcactgtcc tccaggggcc
     2101 tcggactttt agtactcaag gcatgatgtg gcagtagctg cttcccctac cactagctgc
     2161 cccctcatgg tcgtctgggg gacagaggtg gtctgtgttt acaagggcag tcaagtccag
     2221 tcacccatat tactcatcaa tgttagacga agccttgagc tgaaggaggt gctgtcggct
     2281 aggcctctac tctgggtttc agagagtagt attggtttca gtctggtctc atttccattg
     2341 ccttaacgct gggtggtcag ggccccaagg aactctggat ctaagctcag gagtacacat
     2401 agcagctatg ggtatgggtg tcctcctctg gtgtaactgt gagactaagt gataggaaga
     2461 agtaaagcct tcatagcgag tggatgggat gaggtgtggc acacatcccc gggagtgctc
     2521 gtgggaagtg gcctccacag aaggtagtca tcttcatcct ctaggacatt taaaacatgc
     2581 tcagtccctg gacccagatg atggcttctc agggcaagtc ataagttatc aggtccactt
     2641 gtctggaaga ataacaagaa agctgctgct ttcgagatca cccgccagag gcggggcacg
     2701 aggcacactg tgttatactg catgagccat gaattgggct agaggaagcc ttgtcatcag
     2761 atactgacca tagcatgtga cactcagact tctcagctcc tgtgcatccc agtgtaggct
     2821 ctgaggccac atggaaactc tagatggttc tgatcactct agccaccgga ggatgaaagg
     2881 gatcttttgc atagcagagg attttataca caaatatatt ttgtttgtaa tgagccattc
     2941 tcaataaata ttctcaccgt acagtggtaa aaaaaaaaaa aaaaa
//
