LOCUS       NM_001033194            4764 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus general transcription factor IIIC, polypeptide 3
            (Gtf3c3), mRNA.
ACCESSION   NM_001033194
VERSION     NM_001033194.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4764)
  AUTHORS   Moniot B, Ujjan S, Champagne J, Hirai H, Aritake K, Nagata K,
            Dubois E, Nidelet S, Nakamura M, Urade Y, Poulat F and
            Boizet-Bonhoure B.
  TITLE     Prostaglandin D2 acts through the Dp2 receptor to influence male
            germ cell differentiation in the foetal mouse testis
  JOURNAL   Development 141 (18), 3561-3571 (2014)
   PUBMED   25142465
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY272879.1, BC141157.1 and AC124538.4.
            
            On Aug 27, 2015 this sequence version replaced NM_001033194.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK165830.1, BC141157.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-65                BY272879.1         1-65
            66-2948             BC141157.1         1-2883
            2949-4764           AC124538.4         62492-64307         c
FEATURES             Location/Qualifiers
     source          1..4764
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 27.13 cM"
     gene            1..4764
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /note="general transcription factor IIIC, polypeptide 3"
                     /db_xref="GeneID:98488"
                     /db_xref="MGI:MGI:2138383"
     exon            1..214
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..2761
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /note="transcription factor IIIC-gamma subunit; TFIIIC 102
                     kDa subunit"
                     /codon_start=1
                     /product="general transcription factor 3C polypeptide 3"
                     /protein_id="NP_001028366.1"
                     /db_xref="CCDS:CCDS14958.1"
                     /db_xref="GeneID:98488"
                     /db_xref="MGI:MGI:2138383"
                     /translation="MSGFSPELIDYLEGKISFEEFERRREERKTREKKSVQEKGKSSP
                     KENPDDSEVPSSSGIDSAKSQDKDANEGETSDGVSKSVHKVFASMLGETEDDEEEEEE
                     EEEEETAEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGE
                     HEEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVR
                     LAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNL
                     LSPSDGERFMQLARDMAKSYYEANDSASAINIIEEAFSKHQGLVSMEDVNIAAELYIS
                     NKQYDKALEVITDFSGIILEKETLEEGTSEENKAAETVTCSIPDSVPIDITVKLMVCL
                     VHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYN
                     LAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSILQQQLGRPEKALEA
                     LEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYLDTLLTMLAMLLKVAMNR
                     AQVCLISSSKSGERHLYLIKVSRDKISDNNEQETSNYDAKAIFAVLTSVLPKEDWWNL
                     LLKAIYTLSDLARFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAY
                     DYIRVMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPDNHALCVLNGHNAF
                     VSGSFKHALGQYVQAFRAYPSEPLYNLCIGLTFIHMASQKYVLKRHALTVQGFSFLNR
                     YLSIRGPCQESFYNLGRGLHQLGLTHLAIHYYQKALALPPLVVEGIEVDQLDLRRDIA
                     YNMSLIYQSSGNTAMAQKLLYTYCVI"
     exon            215..326
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            327..511
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            512..635
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            636..827
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            828..993
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            994..1141
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1142..1214
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1215..1318
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1319..1490
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1491..1693
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1694..1795
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1796..1931
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            1932..2169
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            2170..2360
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            2361..2485
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            2486..2638
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
     exon            2639..4764
                     /gene="Gtf3c3"
                     /gene_synonym="TF3C-gamma; TFIIIC102"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggccgggaa ggtttctagg gcggacgctg gtccggtctc tcctaggcgt cctacagagc
       61 ctgggagtgc tgcagcttcc ctggcccgct gcgcagcgtc ggccctgcag acatgtcggg
      121 gttcagcccg gaacttatcg actacctgga agggaaaatc tcctttgaag agttcgaaag
      181 gcggagagaa gagagaaaaa cccgagagaa gaaaagtgtt caggaaaaag gaaaatcatc
      241 acccaaagaa aacccagatg actccgaagt tccatcctca tcaggaattg actctgccaa
      301 atcccaggac aaagacgcca atgaaggaga aacatcagat ggggtgagta agtcagttca
      361 caaagtcttt gcttccatgc ttggagagac tgaagatgat gaagaggagg aagaagagga
      421 ggaggaggaa gaaacagcag agcaacccac tgcaggcgat gtatttgtgt tggagatggt
      481 tctcaaccgt gaaaccaaga aaatgatgaa agagaagagg cctcggagta aactccccag
      541 agccctgaga ggtctcatgg gtgaagccaa tattcgcttt gctagaggag aacatgaaga
      601 agccatattg atgtgcatgg aaatcataag acaagctcct ttggcttatg agccattctc
      661 tacacttgcc atgatatacg aggatcaagg tgacatggag aaatcattgc agtttgagtt
      721 gattgctgca catttaaatc ccagtgacac agaagaatgg gttaggctgg cagaaatgtc
      781 tctggaacaa gataacatta agcaggctat tttttgctat acaaaagctc ttaaatatga
      841 acctactaat gtccgttacc tgtgggagag atcaagcctt tatgaacaga tgggtgatca
      901 taaaatggcc atggatggct ataggcgcat tttaaatctt ttgtctccat ctgatggaga
      961 acgttttatg cagttggcta gagatatggc aaagagttac tatgaagcca atgacagcgc
     1021 ttcagctata aacataattg aagaagcttt ctcaaaacat caaggcttag tctccatgga
     1081 agatgttaac atagcagctg aattatatat ttccaacaag cagtatgaca aagctttgga
     1141 ggtaattaca gatttttctg gaattatcct agaaaaggaa actttggaag aaggcacctc
     1201 agaagagaat aaagctgctg agacggttac ctgctctata cctgacagcg tgccaataga
     1261 catcacggtg aagctgatgg tctgccttgt acatctcaac atccttgagc ccctcaatcc
     1321 tcttctgaca acactggtag aacagaaccc tgaagatatg ggtgacctct atcttgatgt
     1381 tgctgaagct tttctggatg ttggtgaata taattctgcc cttcccctgc tcagtgccct
     1441 ggtttgctct gaaagataca acctcgcagt ggtttggctt cggcatgcag aatgtttaaa
     1501 ggccttgggc tacatggaac gtgctgctga aagctacagt aaagtggttg atctggctcc
     1561 actccatttg gatgcaagaa tttcactttc catcctgcag cagcagctag gccgtcctga
     1621 gaaagctctg gaagcgctgg aacccatgta tgatccagac accttagccc aagatgccaa
     1681 tgctgcacag caggaactga aattactgct ccatcgttct actctattgt tttcacaagg
     1741 caaaatgtac ggctatctgg ataccttgct aaccatgctc gccatgcttt taaaggttgc
     1801 gatgaataga gcccaagttt gtttgatatc tagttccaaa tctggagaaa gacatctcta
     1861 ccttattaaa gtgtcaagag ataaaatatc agacaacaac gagcaggaaa catcaaatta
     1921 tgatgcaaaa gcaatatttg ctgtactcac gagtgtcttg ccgaaagaag actggtggaa
     1981 ccttctctta aaggccatat ataccttgag tgatttggct cggttccaag aagctgaatt
     2041 gctggtagat tcttccctgg aatattattc attttatgac gacagacaaa aacgcaaaga
     2101 actagaatac tttggtcttt ctgctgctat tctggacaaa aatttcagaa aagcatatga
     2161 ctatatcagg gtaatggtaa tggaaaatgt caataagccc cagctgtgga atattttcaa
     2221 tcaagttacc atgcactccc aagatgtaag acatcatcga ttctgtctcc gtctgatgct
     2281 gaaaaaccca gataatcatg ctctgtgcgt tttaaatgga cacaatgcat ttgtatctgg
     2341 tagtttcaaa catgcacttg gacagtatgt ccaagccttc cgtgcctatc ccagtgagcc
     2401 gctctacaat ctctgcatag gcctcacctt tattcacatg gcatctcaga agtatgtgct
     2461 gaagagacat gctctgactg tgcagggctt ttccttcctt aatcgatacc tcagcatccg
     2521 tggaccttgc caggaatctt tctacaattt gggccgtggc cttcatcagc tggggctgac
     2581 acaccttgca atccactatt accagaaggc tctggcactc cctccacttg tggtcgaggg
     2641 tatagaagtt gaccagttag atttacgaag agatattgcc tacaacatgt ctctcattta
     2701 tcagagcagt gggaacactg caatggctca aaagcttttg tatacctact gtgtcatata
     2761 agcagtgtaa tttataagac gatgtatgga ccagtatctt ctaacgggac ctcattgttc
     2821 ttgatgataa aaatggtact gtcatcactg cttgctacca ttacaactgc tttgaagcag
     2881 gggatgtagc tcagctgtag actgcctgct tgcttcatat gtacaaggcc ccagattcaa
     2941 gcctttggaa aattgaaaca cagcttttac tctggaatat atgcaaagtt gctattccta
     3001 tgagaatgta cataatattc tttgttgtta gcattctaca ataaaattat tccaaacact
     3061 gaaatggaca atattgcctt ctgaatcagt tggaatggaa catactattt ttctacttaa
     3121 tatctgctaa actcctgtga accagatgtt ttgacaggtg ctggtaatat tggagacagt
     3181 gtggtttgtc cttcaggcat tacagagtac actactgaga tagtcaccac tgaggacaat
     3241 tatttatgta tttattttct tgtactatat attgaaacca ggaccttgta ctactatgct
     3301 aagcaagtga tataccactg agctacagcc tcagcctgca cagttttgtt tgttttgttt
     3361 tgttttgttt tgttttgttt gttttgcttt gtttgtttgt tgagacaggg tttctcttag
     3421 tagtcttgat tatcctggaa tttactttgt agaccaggct ggccttgacc tcaggcctac
     3481 ctctgccttc caagtgccag gattaaaggc gtgtgccacc atcactcagt tgcacagttc
     3541 ttaaatataa agtgtgaaca tgtatttctt tgaaagaaat atttgttcca tttatatatg
     3601 gcaccatttc ttatagccat tactgtccca tagtgcaatg ttcaaataca catcaaagga
     3661 agttggactc tttttttttt tttttttttt acttctctga cttttggcta agctcaagtt
     3721 cagaacgctg ccttggagga agtaatgaga cggcttattc tgagctaaaa atgagtgaca
     3781 tctgccctga agcaacccaa gtttttgtgg ataacgtgtc ccatcattaa agaggttcta
     3841 catactttta tagccaaaca aagtcctaaa acgagatcct tgacaaatgt cttcctggga
     3901 gtttagatgg caaagctctg cagagcgaga agctgtgcct catccagctt ttatctcaga
     3961 tcatccagag atccgatgag caatgcacgc acgagatgct tgcggaagtt ggactcttat
     4021 ggtaatataa ttacttatat tactttgtta gtcagcacct aacaaaatta tttaagatga
     4081 ttttatggtg ggaagacaaa taattgacta atttgacatt catctgtggg tatgttaatt
     4141 tcagataata aaccttggaa tcaggcttaa ttcaaagccc aatgttccaa ggcataacaa
     4201 ccttggcttc ccactggaga aaagggatgg tcgtgttcag ttactgtcat gctttccagt
     4261 tcaagaaagt ttagtactat cagaatacta aagaggggga agttggatat atggaatgaa
     4321 gtgttgacag ggtttaaaga tattttactt cattatgtgt tcttgaatct cagattgaaa
     4381 aaaaacattt gctagataga ctgtttcttg gaaaataact gctataatgt atgattgatt
     4441 ctaagactga tccagttgta aaggaaaacc atgtgagacc gaggatcaaa atacaatggc
     4501 gactttagga gttcttccca ctctttatat tgtatactca gctccccagt tgaaaagtag
     4561 aacttgtgag tagttagtaa atgtatcttg tattctgtat gtttctatat gtaaataaat
     4621 cctattttta taattgacat ttcacctttt aaacttttca tttcatgcca tttaacaatt
     4681 gtgatgaagc taactagttg tgattgataa atttaggtct tggcatcctg tgtgagcatt
     4741 ttgtgtgtag tttttcctgt ggac
//
