LOCUS       XM_011240894            3736 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus general transcription factor II I repeat
            domain-containing 1 (Gtf2ird1), transcript variant X11, mRNA.
ACCESSION   XM_011240894
VERSION     XM_011240894.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011240894.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3736
                     /gene="Gtf2ird1"
                     /gene_synonym="1700012P16Rik; BEN; Cream1; ESTM9; Gtf2il;
                     GTF3; MusTRD1; Tg(Alb1-Myc)166.8Sst; WBSCR11"
                     /note="general transcription factor II I repeat
                     domain-containing 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 mRNAs, 43 ESTs, 479
                     long SRA reads, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     36 samples with support for all annotated introns"
                     /db_xref="GeneID:57080"
                     /db_xref="MGI:MGI:1861942"
     CDS             273..3569
                     /gene="Gtf2ird1"
                     /gene_synonym="1700012P16Rik; BEN; Cream1; ESTM9; Gtf2il;
                     GTF3; MusTRD1; Tg(Alb1-Myc)166.8Sst; WBSCR11"
                     /codon_start=1
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X7"
                     /protein_id="XP_011239196.1"
                     /db_xref="GeneID:57080"
                     /db_xref="MGI:MGI:1861942"
                     /translation="MALLGKHCDIPTNGCGSERWNSTFARKDELINSLVSALDSMCSA
                     LSKLNTEVACVAVHNESVFVMGTEKGRVFLNTRKELQSDFLRFCRGPLWNDPEAGHPK
                     KVQRCEGGGRSLPRSSLEQCSDVYLLQKMVEEVFDVLYSEAMGRATVVPLPYERLLRE
                     PGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLRRPPDDGGQDTKALVEMN
                     GISLLPKGSRDCGLHGQASKVAPQDLTPTATPSSMANFLYSTSMPNHTIRELKQEVPT
                     CPLTPSDLGMGWPVPEPHVPSTQDFSDCCGQTPAGPAGPLIQNVHASKRILFSIVHDK
                     SEKWDPFIKEMEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGI
                     PDKIPFKRPCTYGVPKLKRILEERHSIHFIIKRMFDERIFTGNKFTKDPMKLEPASPP
                     EDTSTEVCRDSMLDLAGTAWSDMSSVSEDCGPGTSGEIAMLRPIKIEPEELDIIQVTV
                     SDPSPTSEEMTDSLPGHLPSEDSGYGMEMPADKGPSEEPWSEERPAEESPGDVIRPLR
                     KQVEMLFNTKYAKAIGTSEPVKVPYSKFLMHPEELFVLGLPEGISLRRPNCFGIAKLR
                     KILEASNSIQFVIKRPELLTDGVKEPVLDTQGISPLPLSGLPPRCHLGPQVLPPHLPS
                     LPTPPPERDSWDRLVDETPKRQGLQENYNTRLSRIDIANTLREQVQDLFNKKYGEALG
                     IKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILSVADKIKFTVTRP
                     FQGLIPKPGHEAGKTTRPRRLQQDTWQPDEDDANRLGEKVILREQVKELFNEKYGEAL
                     GLNRPVLVPYKLIRDSPDAVEVKGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIIN
                     QLQPFAEVCNDPKVPEEDDSNKLGKKVILREQVKELFNEKYGEALGLNRPVLVPYKLI
                     RDSPDAVEVKGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFGDVCNNAK
                     VPAKDNIPKRKRKRVSEGNSVSSSSSSSSSSSNPESVASTNQISLVQWPVYMVDYSGL
                     NVQLPGPLDY"
ORIGIN      
        1 caaagagaga acctcccaga gcccgggctc ggcttcgcgc tcgctccgcg ccccgccctc
       61 cgccgcagcc cgcgccgggg gtgggggccc cgcgcagccc ccggccggcc gcccgcaccg
      121 cgtccgccct ccttccctcc ctccctctac tgatcctgtc ccccattccc ggattattaa
      181 ctcagcaacc agaggcgact ggatctaccg agtcctggcc accgggcccg ggccggggcg
      241 cccggagcgc ttggggatcc tgcaaggtga ccatggcctt gctggggaag cactgtgaca
      301 tccccaccaa cggctgtggg tctgagcgct ggaactccac cttcgcccgc aaggacgaac
      361 tcatcaacag tctggtgtcc gccttagact ccatgtgctc ggcgctctcc aagctgaaca
      421 cggaggtggc ctgcgtggcg gtacacaatg agagcgtctt cgtgatgggc accgagaagg
      481 gaagggtgtt tctgaacact cggaaggagc tacagtcaga cttcctcagg ttctgccggg
      541 gacccctgtg gaacgatcca gaagcaggac accctaaaaa ggtgcagcgc tgtgaaggcg
      601 gtggccggag cctcccgcgg tcctctctgg agcagtgctc ggatgtgtac ctgctgcaga
      661 agatggtaga ggaagtgttt gatgttcttt atagtgaggc tatgggcagg gccaccgtgg
      721 tacctttgcc ctatgagagg ctgctcaggg agccggggct actggcggtg caggggctgc
      781 ccgagggcct ggccttccgg aggccagcag agtatgaccc caaggcactc atggccatat
      841 tggagcacag tcaccgaatt cggtttaagc tcaggaggcc tcctgatgac ggtgggcagg
      901 acacgaaggc gctggtggag atgaacggta tctctctgct acccaagggg tcccgagact
      961 gtggtctgca tggccaggcc tccaaggtcg ctccccaaga cctgaccccc accgccaccc
     1021 catcctctat ggccaacttc ctgtacagca cttcgatgcc caaccacacg atccgggaac
     1081 tcaagcagga ggtgccaacc tgcccgttga cccccagcga cctgggcatg ggctggcccg
     1141 tgcctgagcc ccatgtcccc agcacccaag atttctctga ttgctgtgga cagacgcctg
     1201 cagggcctgc tgggcctctc atccagaatg tccatgcttc caagcgcatc ctcttctcca
     1261 tcgtccatga caagtcagag aagtgggatc ccttcatcaa ggaaatggag gacatcaata
     1321 ccctgcggga gtgcgtgcag attctgttta acagcagata cgcggaagcc ctgggcctgg
     1381 accacatggt ccctgtgccc tataggaaga ttgcctgtga ccccgaggct gtggaaattg
     1441 tgggtattcc agacaagatc cccttcaagc gaccctgtac ttacggagtg ccgaagctga
     1501 agaggattct ggaggagcga cacagcattc acttcattat caagagaatg ttcgatgagc
     1561 gcattttcac agggaacaag tttaccaaag accccatgaa gctggagcca gctagcccac
     1621 cagaagacac ttccacagaa gtctgtaggg acagcatgct ggacctggct gggactgctt
     1681 ggtcagacat gagcagcgtc tctgaagact gtgggccagg aacctcagga gagatagcaa
     1741 tgttgaggcc tatcaaaatc gagccagagg agctggacat tattcaggtt acggtctcag
     1801 atccttcacc tacctctgag gagatgactg actcgttacc tgggcatctg ccctcagagg
     1861 attccggtta tgggatggaa atgccggctg acaaaggccc cagtgaagaa ccgtggtcag
     1921 aagagaggcc ggccgaagag agccctggtg acgtgatccg gcccctacgg aagcaggtgg
     1981 agatgctgtt caacacgaaa tatgccaaag ctattggtac ctcagagccg gtcaaggtgc
     2041 cctactccaa gttcctgatg cacccggagg agctgttcgt actgggactg cctgaaggca
     2101 tctctcttcg gagacccaac tgctttggga ttgcaaagct gcggaagatt ctggaagcga
     2161 gcaacagcat ccagtttgtc atcaagagac ccgaactgct cactgacggt gtcaaagaac
     2221 ctgttctgga cactcaaggc atttccccac tgcccctgtc gggtttgccc cctcgatgcc
     2281 acctgggacc ccaggtgctc cctcctcacc tgccttctct ccccacccca cccccagaga
     2341 gggactcctg ggaccgtctt gtggacgaga ccccgaagag acagggcctt caagaaaatt
     2401 acaacaccag actctcgcgg atcgacatcg ccaacacgct tagggaacaa gtccaagacc
     2461 tgtttaacaa gaaatacggt gaagctctgg gcatcaaata cccagtgcag gtgccctaca
     2521 agagaatcaa aagcaaccca ggctcggtaa tcattgaagg cctacccccc gggatcccat
     2581 tccgcaaacc ctgcaccttt ggctcccaga acctggaaag gattctctct gtggctgaca
     2641 agatcaagtt cacggtcacc aggccattcc aaggacttat cccaaagcct ggacatgaag
     2701 ctgggaaaac caccagacca aggagactgc aacaggacac ctggcagcca gatgaggatg
     2761 atgccaacag actgggggag aaggtgatcc tccgagagca ggtgaaggag ctcttcaatg
     2821 agaaatacgg tgaggccctg ggactgaatc ggcctgtgct ggtcccttac aaactgatcc
     2881 gggacagccc agatgccgtg gaggtgaagg gcctcccaga tgacatcccc ttccggaacc
     2941 ccaacaccta tgacatccat cggctggaga agatcctgaa ggccagggag catgtgcgga
     3001 tggtcatcat caaccagctc caaccctttg cggaagtctg caatgacccc aaggtgccag
     3061 aggaggatga ctctaacaag ctcgggaaga aggtgatcct ccgagagcag gtgaaggagc
     3121 tcttcaatga gaaatacggt gaggccctgg gactgaatcg gcctgtgctg gtcccttaca
     3181 aactgatccg ggacagccca gatgccgtgg aggtgaaggg cctcccagat gacatcccct
     3241 tccggaaccc caacacctat gacatccatc ggctggagaa gatcctgaag gccagggagc
     3301 atgtgcggat ggtcatcatc aaccagctcc aaccttttgg ggacgtctgc aacaatgcca
     3361 aggtgccagc caaagacaac attcccaagc gcaagagaaa gagggtctct gaaggcaact
     3421 cagtctcctc ttcttcctcc tcttcatctt cgtcctctaa cccagagtct gtggcatcca
     3481 ccaaccagat ctccctcgtg cagtggccag tgtacatggt ggactattcc ggactaaacg
     3541 tgcagcttcc gggccccctt gattattaga cctcagagcc gaatcaggac ctcaactcaa
     3601 aagactaaag gaaaatgtaa tttatgtaca aagtatattc ggatatgtat caatgccttt
     3661 tagtttttcc aatgattttt acactatatt cctgccgcca aggccttttt aaataagtaa
     3721 agaaaatgaa aaagaa
//
