LOCUS       XM_036164818            4315 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus general transcription factor II I (Gtf2i),
            transcript variant X39, mRNA.
ACCESSION   XM_036164818
VERSION     XM_036164818.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4315
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4315
                     /gene="Gtf2i"
                     /gene_synonym="6030441I21Rik; BAP-135; Diws1t; GtfII-I;
                     Spin; TFII-I; WBSCR6"
                     /note="general transcription factor II I; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 mRNAs, 127 ESTs, 2243 long SRA reads, 1 Protein,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 49 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:14886"
                     /db_xref="MGI:MGI:1202722"
     CDS             379..3240
                     /gene="Gtf2i"
                     /gene_synonym="6030441I21Rik; BAP-135; Diws1t; GtfII-I;
                     Spin; TFII-I; WBSCR6"
                     /codon_start=1
                     /product="general transcription factor II-I isoform X20"
                     /protein_id="XP_036020711.1"
                     /db_xref="GeneID:14886"
                     /db_xref="MGI:MGI:1202722"
                     /translation="MAQVVMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEV
                     ACIAVYETDVFVVGTERGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRM
                     SVDAVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFK
                     HPEHYDLATLKWILENKAGISFIIKRPFLEPKKHLGGRVLAAEAERSMLSPSGSCGPI
                     KVKTEPTEDSGSHHSSEGNEGTEVEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSPPT
                     KRLKSTEPPPPPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKA
                     KGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHE
                     LLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKF
                     EAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQ
                     PRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEG
                     LPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGMASKINTKALQSP
                     KRPRSPGSNSKVPEIEVTVEGPNNSSPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWN
                     AKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPST
                     FGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVED
                     LNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINP
                     GCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQNES
                     EGPVIQESAEASQLEVPVTEEIKETDGSSQIKQEPDPTW"
ORIGIN      
        1 aaaaaaggca aaaaaaaaaa aagggggaaa aaaaaggagg aggaggaggg tgagagagaa
       61 gctgggagag cagagaaaag ggggcaccgg cggccccccc gcttccctgc acgcgcttgc
      121 cgcccgcctg ccgcggttat ccctgggctt cgtccctgtt cccccccccc ccccccggcg
      181 tctggcgacc cagcgtggag cgaggccccg ccgggggcgg ccatgcggcg gtgacaggag
      241 cacggccgag acgcacgggc ccccctcgcc ctctcacctc caccccgttc gccagctcgc
      301 cgaggcccct ccggcctaca ctcgcttgct gtccgcatcc ccccctcccc gaccctcccc
      361 ggctgctctt cgggaatcat ggcccaagta gtgatgtctg ccttgcctgc cgaagatgaa
      421 gagtcttcag agagcaggat ggtggtgacc ttcctcatgt ctgccctgga gtccatgtgt
      481 aaagagctgg ccaagtccaa ggctgaggtg gcctgcattg ctgtgtatga gaccgacgtg
      541 tttgttgttg gaaccgaaag agggcgtgct tttgtcaata ccagaaaaga tttccaaaaa
      601 gactttgtga agtattgtgt tgaagaagaa gaaaaggccg ccgagatgca taagatgaaa
      661 tctaccaccc aggccaatcg gatgagtgtg gatgctgtag aaattgaaac actcagaaaa
      721 acggtggagg actatttctg tttttgctat gggaaagctt taggcaaatc cacagtggtc
      781 cctgtgccat atgagaagat gctgcgcgac cagtcggctg tggtggtgca ggggcttccc
      841 gagggggttg ccttcaagca ccccgaacat tacgacctcg caaccttgaa gtggattttg
      901 gagaacaagg cagggatttc cttcatcatt aagagacctt tcctcgagcc gaagaaacac
      961 ctcggtggtc gagtgctggc ggccgaggct gagaggtcca tgctgtctcc tagtggaagt
     1021 tgtggcccca tcaaagtgaa aactgaaccc acagaagatt ctggaagcca tcactcctca
     1081 gaaggcaacg agggaacgga agtggaagtg ccagcagaag attctactca acatgtccct
     1141 tcagaaacca gtgaggaccc cgaagttgag gtgaccattg aagatgatga ctattctcca
     1201 cccaccaaga ggctaaagag cacggagccg cccccgcccc cgcccgtccc ggagcccgcc
     1261 aacgctggca agcgcaaagt gagggagttc aactttgaga aatggaacgc acgcatcact
     1321 gacctacgga aacaagttga agagttgttc gaaagaaaat atgctcaagc catcaaagcc
     1381 aaaggcccgg tgacgatccc gtaccctctt ttccagtccc atgttgaaga tctttacgta
     1441 gaagggcttc ctgaagggat tccttttaga aggccgtcga cgtacggcat tcctcgcctt
     1501 gagaggatat tgctggcgaa ggaaaggatc cgcttcgtga ttaagaaaca tgagcttctg
     1561 aactcaacac gagaagattt acagcttgat aaaccagcct caggagtgaa agaagagtgg
     1621 tacgctcgca tcaccaaact gaggaagatg gttgaccagc tcttctgcaa gaaatttgcc
     1681 gaggccttgg gaagcacgga agccaaggct gtaccgtacc aaaaatttga ggcccatccc
     1741 aatgatctct atgtggaagg acttccagaa aacattcctt tccgaagccc ctcgtggtat
     1801 ggaatcccaa gactggaaaa aatcatccaa gtgggcaatc gaattaaatt tgttatcaag
     1861 agaccagagc tgctcactca cagcacaact gaagtgactc agccacggac aaacacacca
     1921 gtcaaagaag attggaatgt cagaatcacc aagctccgaa agcaagtgga agagatcttt
     1981 aatttgaagt ttgctcaggc tctgggcctc acagaggctg tgaaggtgcc atatcctgtg
     2041 ttcgaatcca acccggagtt tctgtatgtg gaagggctcc ccgaagggat ccccttccga
     2101 agccctacct ggtttgggat tccacgcctc gagaggattg tccgtggcag caataagatc
     2161 aagtttgttg ttaaaaagcc tgagctagtt gtgtcctatt tgcctcctgg gatggctagc
     2221 aaaatcaaca ctaaagcatt gcagtcccca aaacgaccac gaagccctgg gagcaactcc
     2281 aaggttcctg aaattgaggt cactgtggaa ggccccaaca acagcagtcc tcagacctct
     2341 gcggttcgaa ctcctaccca gaccaatggt tcaaatgttc ccttcaagcc tcgagggaga
     2401 gagttttcct ttgaggcctg gaatgctaag atcacagacc tgaagcagaa agtggagaac
     2461 ctcttcaatg aaaagtgcgg ggaagcgctt ggccttaagc aggctgtgaa agtcccgttt
     2521 gcgttgttcg agtccttccc agaagacttc tatgtggaag gcttgcccga gggggtgccc
     2581 ttccgaaggc cgtccacatt tggcattccc aggctggaga agatactccg gaacaaggcc
     2641 aagataaagt tcatcattaa aaaacctgag atgttcgaga cggccatcaa agagagcacc
     2701 tcttccaaaa gccctccaag aaagataaac tcatcaccca acgttaatac tactgcatca
     2761 ggtgtggaag acctgaacat catccaggtg acaattccag atgacgataa tgaacgactg
     2821 tccaaagttg aaaaggccag gcagctgcgg gagcaggtca acgacctctt cagtcggaag
     2881 tttggtgaag ctattgggat gggcttcccg gtgaaggtcc cctacaggaa gatcaccatc
     2941 aaccctggct gcgtggtggt cgatggcatg ccccccgggg tgtccttcaa agcccccagt
     3001 tacctggaga tcagctccat gaggaggatc ttagactctg cggagtttat caagttcact
     3061 gtcattagac catttccagg acttgtgatt aataaccagc tggttgatca gaacgagtct
     3121 gaaggccctg tgatacaaga atcagccgag gcaagccagt tggaagtccc agtaacagaa
     3181 gaaattaaag agacagatgg gagttcacag atcaagcagg agccagaccc cacgtggtag
     3241 accgtggctc tccaggttcg tccagtgtcc agcgtgcgtg gtggagaaga gctttgggac
     3301 ccgttcctgc cagctctgta atatacttgt ataacagaaa taccttctat acaaaccttc
     3361 ttttctactt ttagatagaa atgtctactt tctcagcagt tctgtgaatt gagctacaca
     3421 gcgtgatgag atgcgcgtgc ctggtggctt gggaacgcac tagaagggtc ttgcagcagt
     3481 gctgaaagag gcgggaatgg cagggacgac tcgtagggtt tcttatgcat cgggcagagc
     3541 cttgggctgt ggtgcgtgtt cccgtcagtg agatattcct acagggcatc ttggcttccg
     3601 cagcaaagga agtccctgtg ctagtcagtg ctttagtttt tctattgaag accagttccg
     3661 tggtcttgca ctcggctgcc cctcctgcca ggggagggct gctgtctgtg tgtgtgacta
     3721 agcctcttcc caagctccat cacgattcct ttgtcctcac tgccattcag agcaaagccg
     3781 gccagctcgc ctgaccgcca gtgagcagcc agtgcatccg tgcagtgcag ctggagaggc
     3841 tagcctcaga gcctcgctcc ggttacttta cagcaagtag atttctgggt gtgtcctaaa
     3901 ggtcagaggt caggtctgca tgcttgagca ggtggaggat ttgcccctcc ccaactggga
     3961 cccacagtgg cctcaggggc tctgggccgc agctctgggt ctgggtcgag tcaggctggg
     4021 ctgtgtgtct gcctggttgg ttagtctcta accacctgtc tggcctctgc gccagggtgg
     4081 ggagtgagga cattggtgtc ccgccctatg tgggggctca cagacgatga taaggtaaca
     4141 gctctcagca gttaggcacg tgagggcacg gttctcggta gtcaccacaa tgttcacaat
     4201 gggaaattat atcacacggt agcagagata ggcattttat gtgttcctta tattttacct
     4261 caaattgtag atatagggta ataaataaaa tccatccatg cctttcacat gcaaa
//
