LOCUS       XM_017320677            4402 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus general transcription factor II I (Gtf2i),
            transcript variant X27, mRNA.
ACCESSION   XM_017320677
VERSION     XM_017320677.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017320677.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4402
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4402
                     /gene="Gtf2i"
                     /gene_synonym="6030441I21Rik; BAP-135; Diws1t; GtfII-I;
                     Spin; TFII-I; WBSCR6"
                     /note="general transcription factor II I; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 mRNAs, 136 ESTs, 2042 long SRA reads, 1 Protein,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 47 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:14886"
                     /db_xref="MGI:MGI:1202722"
     CDS             379..3327
                     /gene="Gtf2i"
                     /gene_synonym="6030441I21Rik; BAP-135; Diws1t; GtfII-I;
                     Spin; TFII-I; WBSCR6"
                     /codon_start=1
                     /product="general transcription factor II-I isoform X11"
                     /protein_id="XP_017176166.1"
                     /db_xref="GeneID:14886"
                     /db_xref="MGI:MGI:1202722"
                     /translation="MAQVVMSALPAEDEESSESRMVVTFLMSALESMCKELAKSKAEV
                     ACIAVYETDVFVVGTERGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRM
                     SVDAVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFK
                     HPEHYDLATLKWILENKAGISFIIKRPFLEPKKHLGGRVLAAEAERSMLSPSGSCGPI
                     KVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQAGPSETDGVDEKLPLSKALQGS
                     HHSSEGNEGTEVEVPAEDDDYSPPTKRLKSTEPPPPPPVPEPANAGKRKVREFNFEKW
                     NARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPS
                     TYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMV
                     DQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKII
                     QVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQA
                     LGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVK
                     KPELVVSYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNSSPQTSAVR
                     TPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFA
                     LFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKES
                     TSSKSPPIFLSGKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQV
                     NDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRIL
                     DSAEFIKFTVIRPFPGLVINNQLVDQNESEGPVIQESAEASQLEVPVTEEIKETDGSS
                     QIKQEPDPTW"
ORIGIN      
        1 aaaaaaggca aaaaaaaaaa aagggggaaa aaaaaggagg aggaggaggg tgagagagaa
       61 gctgggagag cagagaaaag ggggcaccgg cggccccccc gcttccctgc acgcgcttgc
      121 cgcccgcctg ccgcggttat ccctgggctt cgtccctgtt cccccccccc ccccccggcg
      181 tctggcgacc cagcgtggag cgaggccccg ccgggggcgg ccatgcggcg gtgacaggag
      241 cacggccgag acgcacgggc ccccctcgcc ctctcacctc caccccgttc gccagctcgc
      301 cgaggcccct ccggcctaca ctcgcttgct gtccgcatcc ccccctcccc gaccctcccc
      361 ggctgctctt cgggaatcat ggcccaagta gtgatgtctg ccttgcctgc cgaagatgaa
      421 gagtcttcag agagcaggat ggtggtgacc ttcctcatgt ctgccctgga gtccatgtgt
      481 aaagagctgg ccaagtccaa ggctgaggtg gcctgcattg ctgtgtatga gaccgacgtg
      541 tttgttgttg gaaccgaaag agggcgtgct tttgtcaata ccagaaaaga tttccaaaaa
      601 gactttgtga agtattgtgt tgaagaagaa gaaaaggccg ccgagatgca taagatgaaa
      661 tctaccaccc aggccaatcg gatgagtgtg gatgctgtag aaattgaaac actcagaaaa
      721 acggtggagg actatttctg tttttgctat gggaaagctt taggcaaatc cacagtggtc
      781 cctgtgccat atgagaagat gctgcgcgac cagtcggctg tggtggtgca ggggcttccc
      841 gagggggttg ccttcaagca ccccgaacat tacgacctcg caaccttgaa gtggattttg
      901 gagaacaagg cagggatttc cttcatcatt aagagacctt tcctcgagcc gaagaaacac
      961 ctcggtggtc gagtgctggc ggccgaggct gagaggtcca tgctgtctcc tagtggaagt
     1021 tgtggcccca tcaaagtgaa aactgaaccc acagaagatt ctggcatttc tctggaaatg
     1081 gccgctgtga cagtgaagga ggagtcagaa gaccctgatt actatcagta taacattcaa
     1141 gcaggccctt ctgaaactga tggtgttgat gaaaagctcc ccctttcgaa ggctttgcaa
     1201 ggaagccatc actcctcaga aggcaacgag ggaacggaag tggaagtgcc agcagaagat
     1261 gatgactatt ctccacccac caagaggcta aagagcacgg agccgccccc gcccccgccc
     1321 gtcccggagc ccgccaacgc tggcaagcgc aaagtgaggg agttcaactt tgagaaatgg
     1381 aacgcacgca tcactgacct acggaaacaa gttgaagagt tgttcgaaag aaaatatgct
     1441 caagccatca aagccaaagg cccggtgacg atcccgtacc ctcttttcca gtcccatgtt
     1501 gaagatcttt acgtagaagg gcttcctgaa gggattcctt ttagaaggcc gtcgacgtac
     1561 ggcattcctc gccttgagag gatattgctg gcgaaggaaa ggatccgctt cgtgattaag
     1621 aaacatgagc ttctgaactc aacacgagaa gatttacagc ttgataaacc agcctcagga
     1681 gtgaaagaag agtggtacgc tcgcatcacc aaactgagga agatggttga ccagctcttc
     1741 tgcaagaaat ttgccgaggc cttgggaagc acggaagcca aggctgtacc gtaccaaaaa
     1801 tttgaggccc atcccaatga tctctatgtg gaaggacttc cagaaaacat tcctttccga
     1861 agcccctcgt ggtatggaat cccaagactg gaaaaaatca tccaagtggg caatcgaatt
     1921 aaatttgtta tcaagagacc agagctgctc actcacagca caactgaagt gactcagcca
     1981 cggacaaaca caccagtcaa agaagattgg aatgtcagaa tcaccaagct ccgaaagcaa
     2041 gtggaagaga tctttaattt gaagtttgct caggctctgg gcctcacaga ggctgtgaag
     2101 gtgccatatc ctgtgttcga atccaacccg gagtttctgt atgtggaagg gctccccgaa
     2161 gggatcccct tccgaagccc tacctggttt gggattccac gcctcgagag gattgtccgt
     2221 ggcagcaata agatcaagtt tgttgttaaa aagcctgagc tagttgtgtc ctatttgcct
     2281 cctgggatgg ctagcaaaat caacactaaa gcattgcagt ccccaaaacg accacgaagc
     2341 cctgggagca actccaaggt tcctgaaatt gaggtcactg tggaaggccc caacaacagc
     2401 agtcctcaga cctctgcggt tcgaactcct acccagacca atggttcaaa tgttcccttc
     2461 aagcctcgag ggagagagtt ttcctttgag gcctggaatg ctaagatcac agacctgaag
     2521 cagaaagtgg agaacctctt caatgaaaag tgcggggaag cgcttggcct taagcaggct
     2581 gtgaaagtcc cgtttgcgtt gttcgagtcc ttcccagaag acttctatgt ggaaggcttg
     2641 cccgaggggg tgcccttccg aaggccgtcc acatttggca ttcccaggct ggagaagata
     2701 ctccggaaca aggccaagat aaagttcatc attaaaaaac ctgagatgtt cgagacggcc
     2761 atcaaagaga gcacctcttc caaaagccct ccaattttcc tttcaggaaa gataaactca
     2821 tcacccaacg ttaatactac tgcatcaggt gtggaagacc tgaacatcat ccaggtgaca
     2881 attccagatg acgataatga acgactgtcc aaagttgaaa aggccaggca gctgcgggag
     2941 caggtcaacg acctcttcag tcggaagttt ggtgaagcta ttgggatggg cttcccggtg
     3001 aaggtcccct acaggaagat caccatcaac cctggctgcg tggtggtcga tggcatgccc
     3061 cccggggtgt ccttcaaagc ccccagttac ctggagatca gctccatgag gaggatctta
     3121 gactctgcgg agtttatcaa gttcactgtc attagaccat ttccaggact tgtgattaat
     3181 aaccagctgg ttgatcagaa cgagtctgaa ggccctgtga tacaagaatc agccgaggca
     3241 agccagttgg aagtcccagt aacagaagaa attaaagaga cagatgggag ttcacagatc
     3301 aagcaggagc cagaccccac gtggtagacc gtggctctcc aggttcgtcc agtgtccagc
     3361 gtgcgtggtg gagaagagct ttgggacccg ttcctgccag ctctgtaata tacttgtata
     3421 acagaaatac cttctataca aaccttcttt tctactttta gatagaaatg tctactttct
     3481 cagcagttct gtgaattgag ctacacagcg tgatgagatg cgcgtgcctg gtggcttggg
     3541 aacgcactag aagggtcttg cagcagtgct gaaagaggcg ggaatggcag ggacgactcg
     3601 tagggtttct tatgcatcgg gcagagcctt gggctgtggt gcgtgttccc gtcagtgaga
     3661 tattcctaca gggcatcttg gcttccgcag caaaggaagt ccctgtgcta gtcagtgctt
     3721 tagtttttct attgaagacc agttccgtgg tcttgcactc ggctgcccct cctgccaggg
     3781 gagggctgct gtctgtgtgt gtgactaagc ctcttcccaa gctccatcac gattcctttg
     3841 tcctcactgc cattcagagc aaagccggcc agctcgcctg accgccagtg agcagccagt
     3901 gcatccgtgc agtgcagctg gagaggctag cctcagagcc tcgctccggt tactttacag
     3961 caagtagatt tctgggtgtg tcctaaaggt cagaggtcag gtctgcatgc ttgagcaggt
     4021 ggaggatttg cccctcccca actgggaccc acagtggcct caggggctct gggccgcagc
     4081 tctgggtctg ggtcgagtca ggctgggctg tgtgtctgcc tggttggtta gtctctaacc
     4141 acctgtctgg cctctgcgcc agggtgggga gtgaggacat tggtgtcccg ccctatgtgg
     4201 gggctcacag acgatgataa ggtaacagct ctcagcagtt aggcacgtga gggcacggtt
     4261 ctcggtagtc accacaatgt tcacaatggg aaattatatc acacggtagc agagataggc
     4321 attttatgtg ttccttatat tttacctcaa attgtagata tagggtaata aataaaatcc
     4381 atccatgcct ttcacatgca aa
//
